Ll_transcript_306799

• Id Trinity: TRINITY_DN52283_c0_g1_i2
• Name Transcript: Ll_transcript_306799
• Sequence: GAGATCGAACCAATAAAGTAACTCCACGTCACTTAATTCACATCACAAACCCTCAGGTTAATCCACGCTGGCAAATCCAAAACCAGTTATATAACAACAA ACCGAGAAAGAAAGAAACTGAAAAACGAATCAGTGATCGAATCAGAGAAGATCGAAGCATAGAAGCGCGATGAGGAAGTGGTCGCTACCTTCCGCTATCT TTCTCCTCTCTCTCCTCATTCTCATTTCAGATCAAGGTCGAAAGATTGAAGCAAATGCGGCGAGTGATTCGGAAGAGCATGTAGATCTACCTAAAGTGGA GGACAAGATCGGTGCAGTTCCATCTGGTCTTTCAACCGATTCTGACGTGGTTAAGAGGGAGGCTGAGTCTATCTCAAAGAAATCGCTTCGCAGCAATGCG GAGAAATTTGAGTTCCAAGCTGAAGTGTCGCGTCTTATGGATATTATCATCAATTCTCTCTATAGTAACAAGGACATTTTCCTTAGAGAGTTGATCTCCA ATGCATCTGATGCGTTGGACAAGATTAGGTTCCTTTCTCTTACCGATAAGGAGATTTTGGGTGAAGGAGATAATGCTAAGCTTGAAATCCAGATTAAGTT AGACAAGGAAAAGAAAATCCTATCTATTCGAGACAGAGGTATTGGTATGACTAAGGAAGATTTAATAAAGAATTTGGGGACCATAGCAAAATCTGGAACC TCATCTTTTGTTGAGAAAATGCAGAAAACTGGAGACCTCAATCTTATTGGGCAGTTTGGAGTTGGTTTCTACTCTGTGTACCTTGTGGCAGATTACGTTG AAGTCATTAGCAAACATAATGATGATAAACAGTATGTGTGGGAATCTAAAGCCGATGGAGCTTTTGCAATTTCAGAAGATACATGGAATGAACCTCTAGG ACGTGGAACTGAGATTAGGATACACCTCAGAGATGAGGCCCAGGAGTACTTGGAAGAGTTTAAGCTTAAAGAATTGGTGAAGAAATACTCTGAATTTATT AACTTCCCTATCAATCTTTGGGCAAGTAAAGAGGTTGATGTGGAGGTTCCTGCTGATGAAGTCGAGTCTAGTGAGGAGGAGGAAGAGGAATCATCTAAAG CAAGCTCCGAGGAAGAAATTGAAGATGAAGATGCTGAAAAAAAGCCCAAGACAAAGACTGTGAAGGAAACAACTTATGAGTGGGAACTTTTAAATGATGT GAAAGCTATATGGCTGCGGAATCCAAAGGATGTTACAGAGGAAGAGTACAACAAATTCTACCACAGTCTTGCCAAGGATTTTAGTGATGAGAAACCTGTA ACATGGAGTCACTTTAGTGCGGAAGGCGATGTTGAGTTCAAGGCTGTCCTTTTTGTGCCACCTAAAGCTCCTCGTGATTTATATGAGAGTTATTATAATG GAAATAAATCCAACCTGAAGTTGTATGTTAGAAGAGTGTTTATTTCAGATGAATTTGATGAATTGTTGCCAAAATACCTCAGCTTTTTGCAGGGTCTTGT TGATTCTGACTCATTGCCACTTAATGTATCACGAGAAATGCTTCAACAACACAGTAGTCTAAAGACAATCAAGAAGAAACTTATAAGGAAAGCCCTCGAT ATGATACGGAAGATTGCTGAGGAGGATCCTGATGAGTCCAATGACAAAGAAAAGAAAGAAGAGGTATCATCTGACAACGATGAGAAAAGAGGTCAATATT CTAAGTTCTGGAAGGAGTTTGGGAAGTCCATTAAACTTGGTATCATCGAAGATGCTACTAACAGAAATCGTCTAGCAAAACTACTCAGATTTGAGACTTC CAAGTCCGAGGGTAAACTGACTTCTCTGGATCAGTACATCTCTAGAATGAAATCTGAACAGAAGGATATCTTTTACATAACTGGAACCAGCAAGGAACAA TTAGAAAAATCTCCATTCCTTGAGCAACTTAAGAAGAAAAATTATGAGGTTATTTTCTTCACTGATCCTGTTGATGAGTACTTGATGCAATACCTCATGG ATTATGAGGACAAGAAGTTCCAAAATGTGTCCAAGGAGGGCCTGAAACTCGGGAAGAGTTCTAAAGACAAGGAACTGAAGGAATCCTTCAAGGATCTTAC TAAGTGGTGGAAAAAGTCCCTTGCTGCTAGTGAGAATCTTGATGATGTGAAGATATCCAACCGTTTGGATAACACTCCTTGTGTGGTAGTGACGTCAAAA TTTGGCTGGAGTGCTAACATGGAGAGGATAATGCAGTCTCAAACTTTAGCAAATACTGCCAGCCAAGCATACATGCGTGGCAAGAGGGTTCTTGAGATCA ATCCCAGACACCCTATTATCAAGGAACTCCGGGATAGAGTAGCTAATAACCCTGAGGATGAGGGTGTGAAGCAAACAGCACAGCTGATATACCAGACTGC TCTCTTTGAAAGTGGTTTCATTCTAAATGACCCTAAGGAATTTGCTTCTCGCATTTATGACTCAGTGAAATCTAGCTTGGACATTAATCCGGAAGCAACT GTTGATGAGGAAGATGAAACTGAAGAGGTTGAGTCTGAAGAAAGTGATGCAAAAGAAGCTGCATCTACATCAGAGGCCGAGGCCGAGGCTGAGGCTGAGG CTGCTAATGATGCTGCTGATGTCAAGGATGAGTTGTAGATTTTGAACTCCAGCGTCCCTTTCTTTATTGCTTGATTTAACATTGAGATAGATGGAGAAAG CTCTGTGAGCATGAGTTTTTATTTTCATTCCATATGTAGTTTGATAAAGGAACGTATTAGTCGTAACAACGCTATCCCAGGAATTTTGTCCTACCATTTA CTTGTTCTTCAACAAAATATGCCGTCTTTTATTTTTTACTTACGTTGTCATCATCAATTTTCTTCTCTCC
• Tissue: pods
• Gene name: LI_gene_191472;
• Additional information: details;

Expression of Ll_transcript_306799

FPKM

• PAB: 3.5
• PNAB: 113.8
• PS1: 97.5
• PS2: 51.7
• PS3: 74.8
• PW1: 37.6
• PW2: 32.2
• PW3: 14.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306799

• Blastp: Endoplasmin homolog from Catharanthus with 80.53% of identity
• Blastx: Endoplasmin homolog from Catharanthus with 86.01% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416726.1)
• Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF02518.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;