Ll_transcript_306820

• Id Trinity: TRINITY_DN52283_c0_g1_i20
• Name Transcript: Ll_transcript_306820
• Sequence: TTTGAAATTATAGTTTGAAAGAAGAAGGTACTAGAAACTCAGTGCGAGGATGAGGAAGTGGACACTCCCTTCCATTCTTCTTCTACTCTCTCTCCTCCTT CTATTTTCAGATCAAGGTCAAAAACTGAAGGCAAATGCAGAGGCAAATTCTGAAGAGCTTGTAGATCCACCTAAGGTGGAGGACAAGATTGGTGCTGTTC CTCATGGTCTTTCCACTGATTCAGATGTGGCTAAGAGGGAAGCGGAGTCGATTTCGAAGAGATCGCTTCGGAGTAATGCGGAGAAGTTTGAGTTCCAAGC TGAGGTGTCGCGGCTTATGGACATTATCATCAACTCACTATACAGTAACAAAGATATTTTCCTGAGGGAGTTGATCTCTAATGCTTCTGATGTAAACTCT TTTTCATTTATTTTATGTTTGCTTGTTTAGTTCATTTGGTGGAAAAAAACTTGCACTGAAACTTTGGTGTGGAACTCAAGCTCTAATTTAGTGTGCATTT TAATTTTAATTAGCTTATTATGCCTTCAAAGTAAATTGTAGAAAAGTTACTGTGAAAATTATATTGTCACTAACACCCATTGCAGACATAAACGGATAAA CCCCAATAGAGGCAAGTGTAATTCTAAAATTAGAAGTGTGCTTAGTGTAATTAAGCCAAACCTAGAGAAAGATCATTGTAGATTCCCTTAGTTTATAATG AAGATATTTGCCAAGAGAGCATTTGAAAAAGGTTAAAAAAAACAAGATTGATTTTTCCCTAAAAATTAATTATAGCCAATCATGCACTTGTTACTAATGA CAAATAACTTCATGTTGTAGGCATTGGACAAGATCAGGTTCCTCTCCCTCACAGATAAGGAGGTTTTGGGCGAAGGTGATAATGCCAAGCTTGAAATCCA GATTAAGTTAGACAAGGAAAAGAAAATTTTATCGATTCGAGATAGAGGTATCGGTATGACAAAGGAGGATTTAATTAAGAATCTTGGGACCATAGCAAAA TCTGGAACTTCAGCATTTGTTGAGAAAATGCAAACAAGTGGAGATCTCAATCTTATTGGGCAGTTCGGAGTTGGCTTCTACTCTGTGTATCTTGTGGCTG ACTATGTTGAAGTCATTAGCAAGCATAATGATGACAAACAGTATGTATGGGAATCAAAAGCTGATGGAGCATTTGCCATTTCAGAAGATACATGGAATGA GCCACTAGGGCGTGGAACTGAGATCAGACTGCACCTTAAAGATGAGGCGGGAGAGTACTTGGAGGAGTCTAAGCTGAAAGAATTGGTGAAGAGATATTCT GAATTTATTAACTTCCCTATCTATATTTGGGCAAGCAAAGAGGTTGATGTGGAGGTCCCTGCTGATGAAGATGATTCTAGCAATGAAGACGAATCATCTG AAAGCAGATCCCCAGAGGAAGAAAGTGAGGAAGCTGCTGATGAAAGTGGAGATGAAGAAAAAAAGCCTAAGACGAAGACGGTGAAGGAAACAACTTATGA ATGGGAACTTTTAAATGATGTGAAAGCTATATGGCTGCGGAATCCAAAGGAGGTTACAGATGAAGAGTACACCAAATTTTACCACTCTCTTGCCAAGGAT TTAAGTGATGATAAACCTTTAGCATGGAGTCACTTTATTGCTGAAGGTGATGTTGAGTTCAAGGCAGTCCTGTTTGTGCCACCCAAGGCTCCTCATGATT TATATGAGAGTTACTACAACTCAAACAAATCCAACCTGAAGTTGTTTGTTAGACGAGTGTTTATTTCAGATGAATTTGATGAACTGTTGCCTAAATACCT CAACTTTTTGAAGGGCCTTGTAGATTCTGACACATTACCACTTAATGTATCAAGAGAAATGCTTCAACAACACAGTAGTCTAAAAACAATCAAGAAGAAA CTTATTAGGAAAGCCCTTGATATGATCCGTAGGATTGCGGAAGAAGATCCTGACGAGTCATCTGACAAAGAAAAGAAAGAAGAAGTGTCCTCCAAAAATG ATGAGAAGAGAGGTCAATATGCTAAGTTTTGGAATGAGTTTGGCAAGTCTATTAAACTTGGTATCATTGAGGATGCCACCAACAGAAATCGGTTGGCAAA ACTGCTCAGATTTGAGAGCACCAAGTCCGAGGGTAAATTGACTTCTCTAGATCAGTACATATCTAGAATGAAAGCTGGACAGAAGGATATATTTTACATA ACTGGAACCAACAAAGAACAGCTGGAAAAATCTCCATTCCTCGAGCGGCTTAAGAAGAAAAATTTTGAGGTTATTTACTTCACAGATCCAGTTGATGAAT ACTTGATGCAATACCTGATGGATTATGAAGATAAAAAGTTCCAAAATGTCTCCAAGGAGGGTTTGAAACTTGGGAAGGATGCAAAGGACAAGGAACTGAA GGAATCCTTCAAGGATCTTACCAAGTGGTGGAAAAATACCCTTGCCAGTGAGAATGTCGATGATGTGAAGATATCGAACCGATTGGATAACACTCCTTGT GTGGTGGTGACGTCAAAATATGGTTGGAGTGCTAACATGGAGAGAATCATGCAGTCTCAAACATTGTCAGATTCTAGCAAGCAAGCATACATGCGAGGCA AGAGGGTTCTTGAGATCAATCCCAGGCACCCGATAATCAAGGAGCTCCGAGAGAGAGTAGTGAAGGACCCTGAGGATGAGAGCGTGAAGCATACAGCCGA GCTAATGTATCAGACTGCACTCTTCGAAAGCGGCTTCCTACTTGATGATCCCAAGGATTTTGCTTCGCGTGTTTACGATTCAGTTAAGTCTAGCTTAGAC ATCAGTCCCGAAGCCACAGTTGAAGAGGAAGATGACACCGAAGAAGTCGAGGCTGAAAGTGACGCGAAAGATGCATCTACTTCAAAGCCAGATGCTGAAG ATGTGAATGATAATGCTGATTTCAAGGACGAGTTGTAGATTTTTCCGTTGTCTCTGTTTCTTGGTTTAGCTTTATGAGATAGATGGTAGGAGACCTCTCT CTAGTAGGAGTTTTGGCTCCATATGTAGTTTTTAAAAAAGTTAGTCTTAACTTTATCACACTGTACTTGAGAATTTTGCCTTCGCATTAATAGTGAACTG TTCAAGAAAATCTCCCTCTGTACTTTTCATGTATGTTTATCATTTTATGTTTAATGTTCAGCCTTTTCCACCTACTTCACAATTTTAATCCTCAAAGTGC AAAAAATGTTGAGTGGAAATGCCGTATGTTCAATCATGTTTTGGCTGAATATGCCCAATCATTTTAGAGGCTTAAAATTG
• Tissue: pods
• Gene name: LI_gene_191472;
• Additional information: details;

Expression of Ll_transcript_306820

FPKM

• PAB: 5.4
• PNAB: 10.6
• PS1: 3.1
• PS2: 38.9
• PS3: 1.9
• PW1: 2.7
• PW2: 4.2
• PW3: 5.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306820

• Blastp: Endoplasmin homolog from Catharanthus with 85.5% of identity
• Blastx: Endoplasmin homolog from Catharanthus with 85.01% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453253.1)
• Pfam: Hsp90 protein (PF00183.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;