Ll_transcript_306803

• Id Trinity: TRINITY_DN52283_c0_g1_i5
• Name Transcript: Ll_transcript_306803
• Sequence: TATAAATGGAAGAAGGTTAGATAAATCAACTCAGTTCAGTGTTACAAGAAGAAGCGAAGCTACTAGAAACTCAACACCATCACTACTTTCATGAAGAAGT GGACTCTCCCTTCAGTTCTTCTTCTACTCTCTCTCCTCCTTCTATTTTCAGATCAAGGTCAAAAATTGAAGGCAAATGCAGAGGCTGATTCAGAAGAGCT TGTAGATCCACCTAAGATTGAGGACAAGATCGGTGCTGTTCCTCATGGCCTTTCCACTGATTCAGATGTGGTCAAGAGGGAGGCAGAGTCGATTTCGAAG AATAGATCACTTCGGAGCAATGCAGAGAAGTTTGAGTTCCAAGCAGAGGTGTCGCGGCTTATGGATATTATCATTAACTCGCTCTATAGTAACAAAGATA TTTTCCTCAGGGAGTTGATCTCTAATGCTTCTGATGCATTGGACAAGATTAGGTTCCTCTCCCTCACAGATAAGGACGTTTTGGGTGAAGGTGATAATGC GAAGCTTGAAATCCAGATTAAGTTGGACAAGGAAAAGAAAATCCTGTCGATTCGAGACAGAGGTATTGGAATGACAAAGGAGGATTTAATTAAGAATCTG GGAACTATAGCAAAATCTGGAACTTCAGCTTTTGTTGAGAAAATGCAGACAAGTGGAGATCTCAATCTCATTGGGCAGTTTGGAGTTGGTTTCTACTCTG TTTATCTTGTGGCTGACTATGTTGAAGTCATTAGCAAGCATAATGAAGACAAACAGTATGTGTGGGAATCAAAAGCTGATGGAGCATTTGCCATTTCAGA AGATACATGGAATGAGCCACTAGGACGTGGAACTGAGATTAGATTACACCTCAAAGATGAGGCTGGGGAGTACTTAGAGGAGTCTAAACTGAAAGAATTG GTGAAGAGATACTCTGAATTTATTAACTTCCCTATCTATATTTGGGCGAGCAAAGAGGTTGATGTGGAGGTTCCTGCTGATGAAGATGATTCTAATGATG AAGACGAATCATCCGAAAGCAGCTCCTCTGACGAAGAAACTGAAGATGTCAATAAAAGTGAAGATGAAGAAAAGAAGCCCAAGACAAAGAAGGTGAAGGA AACGACTTATGAATGGGAACTTTTAAATGATGTGAAAGCTATATGGCTGCGGAATCCAAAGGAGGTTACAGATGAAGAGTACACCAAATTCTACCACTCT CTTGCCAAGGATTTAAGTGATGAGAAACCTTTAGCATGGAGTCACTTTATTGCTGAAGGTGATGTTGAGTTCAAGGCAGTCCTGTTTGTGCCACCTAAGG CTCCTCAAGATTTATATGAGAGTTACTACAACTCAAACAAATCCAACCTGAAGCTGTATGTTAGACGTGTGTTTATTTCAGATGAATTTGATGAACTGTT GCCAAAATATCTCAACTTTTTGCAGGGTCTTGTAGATTCTGACACATTACCACTTAATGTATCACGAGAAATGCTTCAACAACACAGTAGTTTAAAGACA ATCAAGAAGAAACTTATAAGGAAAGCCCTTGATATGATCCGTAGGATTGCTGATGAGTCCACCGACAAAGACAATAAAGAGGTGTCATTTGACAATGATG AGAAAAAGGGTCAATATGCTAAGTTTTGGAATCAGTTTGGAAAGTCTATCAAACTTGGTATCATCGAAGATGTTACTAACAGAAATCGTTTGACAAAACT GCTCAGATTTGAGACCACCAAGTCCGAGGGAAAATTGACTTCTCTGGATCAGTACATCTCTAGAATGAAATCCGGACAGAAGGATATCTTTTACATAACT GGAACTAGCAAAAAACAATTGGAAAAATCTCCTTTCCTCGAGCAACTTAAAAAGAAAAATTATGAGGTTATTTTCTTCTCTGATCCAGTTGATGAATACT TGATGCAATACCTGATGGATTACGAAGACAAAAAGTTCCAAAATGTGTCCAAGGAGGGCCTGAAACTAGGCAAAAGTGCAAAAGACAAGGAACTGAAGGA ATCCTTCA
• Tissue: pods
• Gene name: LI_gene_191472;
• Additional information: details;

Expression of Ll_transcript_306803

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.1
• PS2: 0.6
• PS3: 0.8
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306803

• Blastp: Endoplasmin homolog from Catharanthus with 85.14% of identity
• Blastx: Endoplasmin homolog from Catharanthus with 88.41% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003545030.1)
• Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF02518.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;