Ll_transcript_306335

• Id Trinity: TRINITY_DN52289_c1_g3_i10
• Name Transcript: Ll_transcript_306335
• Sequence: CTCTCTCTCTCTCTCTCTCTCTCTGCTTCTTCTATTTTTCCCTTTTACTCTATTTCAAGGCTCACTTCACTTCTTTGCAACCCATCACTCATCTCATTGT GGTCTGTGAAGGGAAATGACAAGAACTGGCCAAGCTTGAAGGAAAAAAGTTGATCTTTTTGCTTTGAATTTGGCTGTGATGGAGTTCCCTACCGTTCCTC ATTTGATGCGAGTCTGCACCCTTTTGCTGCTTCTATTACTATTGAAGAGTGATGTTGTATATTCCAATTCTGATTACTTGATCGGTCTTGGAAGCTATGA TATAACGGGTCCTGCAGCTGATGTTAACATGATGGGTTATGCTAACACAGAACAAGTTGCATCTGGTGTTCACTTAAGGCTGCGGTCTCGGGCCTTCATT GTTGCTGAACCACATGGTAACCGGGTAGTTTTTGTGAATCTTGATGCTTGTATGGCTTCACAGCTTGTGACTATCAAAGTACTTGAGAGGCTCAAAGCAA GATATAGTGACCTGTATAATGAAAATAATGTAGCTATTAGTGGCATTCACACTCATGCTGGTCCTGGGGGTTATCTTCAGTATGTTGTGTATATTGTAAC ATCTCTTGGATTTGTGCGCCAGTCGTTTGACGCCCTTGTTGATGGCATTGAGAAAAGCATTGTCAAAGCCCATGAAAATCTCCGCCCAGGATCAATATTT GTCAATAAGGGAGATCTCTTAGATGCTGGTGTAAATCGAAGTCCTAGTGCTTATCTCAATAATCCTGCTGCAGAGAGAAGCAAATATATGTATAATGTTG ATAAAGAAATGACTCTTTTAAAGTTTGTTGAAGATGAACGGGGTCCTGTGGGAAGCTTCAACTGGTTTGCTACTCACGGAACTTCAATGAGCCGTACAAA CTCATTAATTAGTGGTGACAATAAAGGTGCTGCTGCACGACTTATGGAAGACTGGTTCGAGCGAAAAGATTCTGTAAAAATGAACTCTGTTGGATTTGAA GATAATAGCATCCCCCGAAGAATTTCAAACATAATTCCCAGCCTCGGCAATAATCACCATGAATTATTGGAACTTGCTTCCTCATTTCAATCTCCTCCTG GTAGGCCAACATCCAGAACTTCGAGTGTTGCTAGACGTGTGAGAGGTGATCTTAGTCAGGTTGACAAGCCTAGATTTGTATCTGCATTTTGTCAATCTAA TTGTGGTGATGTTAGTCCAAATGTACTTGGAGCTTTTTGTACAGACACTGGACTACCTTGTGACTTCAATCATAGTACATGTGGAGGGAAGAATGAATTA TGCTATGGCCGTGGACCTGGTTACCCAGATGAATTTGAAAGTACACGTATTATAGGGGAGAGGCAATTTAGGAAAGCAGTGGATCTGTTCAATGGAGCAT CTGAACAAATTAAAGGGAAGGTTGATTATCGACATACCTACATAGATTTCTCCAAGCATGAGGTAACTCTTTCCAAAGGAGGGGCTTCTGAGGTAGTCAA GACATGCCCTGCTGCAATGGGATTTGCATTTGCTGCTGGAACAACAGATGGGCCTGGAGCTTTTGATTTTAAGCAGGGTGATGATAAGGGAAATCCTTTC TGGAACTTGGTCCGCAACGTACTTAAATCACCAAACAAGGAACAAATAGACTGTCAACAGCCTAAGCCCATTTTGCTTGATACTGGTGAAATGAAGTTAC CATATGACTGGGCACCCTCAATCCTTCCAATCCAGATCCTCCGAGTTGGGCAGTTTGTTATTCTAAGTGTACCAGGAGAATTTACAACAATGGCTGGAAG GCGTCTTCGTGATGCAGTGAAGGCAGTGTTAAGCGGTAACAATGACTTTGGTAGCAACATTCATGTTGTCTTAGCAGGGTTGACTAATACATATTCACAG TATGTGACTACATACGAAGAGTACCAGGTCCAAAGATATGAGGGTGCTTCCACGTTGTATGGTCCACACACACTGAGTGCATACATTCAAGAGTTCAAGA AGCTAGCTAATGCTCTCATCAGTGACCAACCTGTAGAACCAGGTCCGCAACCACCAGATCTCCTGAACCAGCAAATAAGCTTACTAACACCGGTGGTGGT GGATGGTACCCCTCTTGGTGTAAATTTTGGAGATGTGAGCATTGATGTACTGAAGAATGCAACCTTCAAGAAAGGGGAGAAGGTGAGTGTTACTTTCTGG TCGGCGTGCCCTCGTAATGACCTCATGACTGAAGGTACATTTGCCCTTGTGGAGTTTCTAGAAGGAAAGGATAGGTGGGTTCCAGCTTATGATGATGACG ACTGGTGCTTGCGTTTTATATGGTCGAGACCTTCGAAACTGAGTTCACGTAGTAAAGCCACCATAGAGTGGAGAATCCCAGAGGATGCAACTCCTGGTGT ATACAGAATAAAACATTTTGGTGCTGCAAAGAGCTTGTTAGGATCAATTCGTCATTTTACAGGCTCATCAAGTGCATTTGTAGTAGCATAGCTAAGGGAT AATTATGTTGTGTTCTAAAAGCTATTGCTACACTTGTTGGTTGTTACTCACTCTTGTTGGACTCAATTGTAAGGGATAATTATGTTGATATATTGATTAT GGTGCCACTGTGTAACAGCATTTGCAAACTCCAAAAAGCAGTATGCGTTTGCCGGGAGTCGAACCCGGGTCTATTGCTTGGAAGGCAATTATCCTAACCG TTGGACTACAAACGCATTCATGAAATCATTCATGTGGTCATCAAATCATCATCTGCTTACCTAAAACTTGTGTGACATGTTTTTTGTTTCTAATTTGAAC TCAAAGTTATACACCATTTTTATTCTAAG
• Tissue: pods
• Gene name: LI_gene_191516;
• Additional information: details;

Expression of Ll_transcript_306335

FPKM

• PAB: 6.6
• PNAB: 20.9
• PS1: 36.6
• PS2: 28.7
• PS3: 41.5
• PW1: 16.1
• PW2: 21.4
• PW3: 13.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306335

• Blastp: Neutral ceramidase 1 from Arabidopsis with 76.52% of identity
• Blastx: Neutral ceramidase 1 from Arabidopsis with 77.04% of identity
• Eggnog: Ceramidase(ENOG410XQWE)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460497.1)
• Pfam: Neutral/alkaline non-lysosomal ceramidase, N-terminal (PF04734.12)
• Rfam: tRNA (RF00005)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;