Ll_transcript_306338

• Id Trinity: TRINITY_DN52289_c1_g3_i11
• Name Transcript: Ll_transcript_306338
• Sequence: CTCTCTCTCTCTCTCTCTCTCTCTGCTTCTTCTATTTTTCCCTTTTACTCTATTTCAAGGCTCACTTCACTTCTTTGCAACCCATCACTCATCTCATGTA AAGATCGCAACTTTACATCTGGGTCGTCACAATTTCATTTGCTCTTTTCTTCTAGTCATTCCATATCTTCATCTCAAATATTGTTATTTTTTAATTCTCT TTTATATTATCCATTATCAAATTGGAATTCATTCTTATTTAATCATGCATTATTTCCTATTTATGGCTCATATTTCCATAACTGAAATCTCCGCATGTGT GATTTAGTTGTGAAGGAAAATGAGAAGAACTGCCTAAGCTTGTAAAAAAAGTGAAAATAATTGTAATAATTTGCGTGGAATTTTTTTAAAATTTTCGTCG CCATGGTTGATTCACAAATTGGAATTTTTTGTTAATAATGCATAGGAAGTTCTGAAAATTCAATTTATGGTTTTTCATTTTTGTATAACTGGAATCCTTT TCTTTTTCTAAGTGTGGTCTGTGAAGGGAAATGACAAGAACTGGCCAAGCTTGAAGGAAAAAAGTTGATCTTTTTGCTTTGAATTTGGCTGTGATGGAGT TCCCTACCGTTCCTCATTTGATGCGAGTCTGCACCCTTTTGCTGCTTCTATTACTATTGAAGAGTGATGTTGTATATTCCAATTCTGATTACTTGATCGG TCTTGGAAGCTATGATATAACGGGTCCTGCAGCTGATGTTAACATGATGGGTTATGCTAACACAGAACAAGTTGCATCTGGTGTTCACTTAAGGCTGCGG TCTCGGGCCTTCATTGTTGCTGAACCACATGGTAACCGGGTAGTTTTTGTGAATCTTGATGCTTGTATGGCTTCACAGCTTGTGACTATCAAAGTACTTG AGAGGCTCAAAGCAAGATATAGTGACCTGTATAATGAAAATAATGTAGCTATTAGTGGCATTCACACTCATGCTGGTCCTGGGGGTTATCTTCAGTATGT TGTGTATATTGTAACATCTCTTGGATTTGTGCGCCAGTCGTTTGACGCCCTTGTTGATGGCATTGAGAAAAGCATTGTCAAAGCCCATGAAAATCTCCGC CCAGGATCAATATTTGTCAATAAGGGAGATCTCTTAGATGCTGGTGTAAATCGAAGTCCTAGTGCTTATCTCAATAATCCTGCTGCAGAGAGAAGCAAAT ATATGTATAATGTTGATAAAGAAATGACTCTTTTAAAGTTTGTTGAAGATGAACGGGGTCCTGTGGGAAGCTTCAACTGGTTTGCTACTCACGGAACTTC AATGAGCCGTACAAACTCATTAATTAGTGGTGACAATAAAGGTGCTGCTGCACGACTTATGGAAGACTGGTTCGAGCGAAAAGATTCTGTAAAAATGAAC TCTGTTGGATTTGAAGATAATAGCATCCCCCGAAGAATTTCAAACATAATTCCCAGCCTCGGCAATAATCACCATGAATTATTGGAACTTGCTTCCTCAT TTCAATCTCCTCCTGGTAGGCCAACATCCAGAACTTCGAGTGTTGCTAGACGTGTGAGAGGTGATCTTAGTCAGGTTGACAAGCCTAGATTTGTATCTGC ATTTTGTCAATCTAATTGTGGTGATGTTAGTCCAAATGTACTTGGAGCTTTTTGTACAGACACTGGACTACCTTGTGACTTCAATCATAGTACATGTGGA GGGAAGAATGAATTATGCTATGGCCGTGGACCTGGTTACCCAGATGAATTTGAAAGTACACGTATTATAGGGGAGAGGCAATTTAGGAAAGCAGTGGATC TGTTCAATGGAGCATCTGAACAAATTAAAGGGAAGGTTGATTATCGACATACCTACATAGATTTCTCCAAGCATGAGGTAACTCTTTCCAAAGGAGGGGC TTCTGAGGTAGTCAAGACATGCCCTGCTGCAATGGGATTTGCATTTGCTGCTGGAACAACAGATGGGCCTGGAGCTTTTGATTTTAAGCAGGGTGATGAT AAGGGAAATCCTTTCTGGAACTTGGTCCGCAACGTACTTAAATCACCAAACAAGGAACAAATAGACTGTCAACAGCCTAAGCCCATTTTGCTTGATACTG GTGAAATGAAGTTACCATATGACTGGGCACCCTCAATCCTTCCAATCCAGATCCTCCGAGTTGGGCAGTTTGTTATTCTAAGTGTACCAGGAGAATTTAC AACAATGGCTGGAAGGCGTCTTCGTGATGCAGTGATGGCAGTGTTAAGCAGCAACAAAGATTTTGGCAGCAACGTTCATGTTGTCTTAGCAGGGTTGACT AATACTTATTCACAGTATGTGACAACATACGAAGAGTACCAGGTCCAAAGATATGAGGGTGCTTCCACACTGTATGGTCCACACACACTGAGTGCATACA TTCAAGAGTTCAAGAAGCTAGCAAAAGCTCTCATCAGTGACCAAAATGTAGAACCAGGTCCACAACCACCAGATCTCCTGAACCAGCAAATAAGCTTACT AACACCGGTTGTAGCGGATGGTACCCCTATCGGTGTAAACTTCGGAGATGTCATTGCTGACGTACCGAAGAACGCAACCTTCAAGAAAGGTGATAAGGTC ACTGTTACTTTCTGGTCTGGGTGCCCTCGTAATGACCTTATGACTGAAGGCACATTTGCCCTTGTGGAGTTCCTCAGAGGAAAGGATACTTGGGTTCCTG CTTATGATGACGATGATTTCTGTTTGCGATTTATATGGTCGAGGCCGTGGAAACTCAGTTTACGCAGTAAAGCCACCTTAGAATGGCGAATCCCACAGGA CGTAACTCCTGGTGTATACAGGTTAAAACATTTTGGTGCTGCAAAGAGCTTGTTAGAATCAATTCGTCATTTTACAGGGTCATCAAGTGCATTTGTAGTA ACATGATAAAGGGGCATTGTAGTTTATATTTTACAGTTTACAATTATCACTATACTTATGACTTGTTGGACTGAGCTTTAGCAGAATACACTAAATCAAG GATCATAACTGTGTTCTCTACTATTATCCATCACCTTTCCCTTGAGTATCATTCTATTATGAAAATCTGCATATGTAGGCACAACCGAACAAGATTAATG TAGACATGCTAATTGGTTGTACTCATAGGCATGTGCCTATGTAAGTTTTATGGACAACAACATCCAACCAAAGTTTATTTTCCTCCCCAAGTGAAACCTG TTACATTGGTTTGAGATATAGCTGAAAAAAGTGGATTATTTTATGAAAGAACTTTTGGGCCTATAAAAAGTGGGATTTGTGCTTATGAAAATTATCAAGT CATCAGGATAAGAAAATCTTGAAAGACGATAAACAATTTTATGAACAATGCAGAGTAGAATTTGTTGATTCTCGAATACGTAGGTATAAAATGGGCTATA TAAAACTGGCATGCCCCGTAACCCACGTGTGGTATTTGAAACGTCTTCCTAGTTATATCGCGAATCTTTTAGATAAATCTCTGAAAGAATTAGAAGGTCT AGTATACTGCGATGTGTGATTTGATCAAAATTCTTATTTTATTGTACAGATTCCGAATGAGAAACTGTTATTCCAGTCAATTGAATTGGCATGCCCCGGA TCTGACATGTATGTCTCTTTGGCCGAGTAACATGAAGCTCAGAATTATGGGTATATTAAATACTCTAAAAAAAAAAAGGGGGGGGTTGGTCTATGGTCCA TTCAGTAATAGCTGTTACCTCGTGAAAAAAAAAAAAAAAAAATCTTTTTTTTGTAATTCCTATGATGCAATTGGAGCTTATCGACAGAAAAGAATCAATT TCGACAGTCCTTTGTGGCTCCGGTGGCGACTAGATCAACGCGTTATTTCGTCAAGAGAAGCTCCTATCGAAGTTCACTACGAATCTTTAGGTACCTATCA TGATATTTATGAGCATTATCTAGTAGTCAGAAGTATAAAAAAACAAATTCGTTGTATATATATTCGAACCACTGTTGGTCATATTTCTTTTTATCGAGAA ATCGAAGAAGCTATACAAGGCTTTTGTCGAGCCCATTCATAGGGTATCCAATCATATACATAGATGGGTTGGTATCTAACCTAAGTCAATTTAGGATATC GGTGTGAATTCCGGTCTTCCCGGTTCGACTATATGATCCTAACTTATAAATTTCTACGCGAATCAAGCTAAAGAAAAGGAAGTTTTACAATCATTGACTC AAATCCATTGTTGAACCGAACTCCACTGAGCGGAATATGGAGGTACTTATGGCAGAACCGGCCAATTTAGTCTTTCACAATAAAGTTATAGGTGGAACCG TCATTAAACGACTTATTAGCAGATTAATAGACCATATGAAACTTGCTTTGCAGCATTTGTTTTCGGAGCTTCACTGATGATTACTGTGGGTTCACTATGT TTTTTATGTCGGCGGCGCACCAAATTGAGAGTAACAAAGAGCACAAAAAGGCGCATAACTGAAGCTACTGGCAACTACAGTGTTCCTATCTATCCATACA AGGACATTGAGAAAGCCACAAATAGCTTCTCGGAGAAGCAACAGCTTGGAAATGGGGCATATGGGACAGTTTATGCAGGGAAGCTTTACAATGATGAATG GGTTGCAATCAAGAGAATTAAGCATAGAGACACTGATAGTATTGAGCAAGTAATGAATGAGATCAAGCTCCTTTCTTCTGTTAGCCACACCAATTTAGTG CGCTTGTTGGGTTGTTCCATAGAATATGGTGAACAAATCCTAGTCTATGAGTTCATGCCCAATGGAACATTGAGTCAGCATTTGCAAAGAGAAAGAGGGA ATGGTCTTACATGGCCAGTTAGACTTGCAATTGCAGCAGAAACAGCACAAGCAATAGCACATCTTCATTCTACTATTAATCCTCCTATTTACCATAGAGA TATAAAGTCAAGTAACATACTTTTGGACTATCATTTCAGATCCAAAGTAGCAGATTTTGGTCTCTCTAGACTTGGAATGACTGAAACATCTCACATTTCA ACTGCCCCACAAGGAACCCCTGGCTATGTTGATCCACAATACCATCAAGATTTTCAACTTTCTGACAAAAGTGATGTGTATAGCTTTGGTGTTGTTCTTG TAGAGATTATAACAGGAATGAAAGTAGTGGACTTTTCTCGTCCTCATAATGAAGTAAACTTAGCTTCTCTTGCTGCAGATAGGATTGGAAGGGGGCTATT AGATGAGATTATAGATCCATTTCTTGAGCCTGAAGTAAGTAATGATGCTTGGTCCTTTTCTTCTATACACAAGATTTCTGAATTAGCATTTAGATGCCTT GCATTTCATAGGGATATGAGGCCTTCTATGACAGAAATAGCAACTGAGTTAGAGCATGTCAGGCTTAGTAACTGGTTAAGTTTTGGAGATAACAATGTTA CAACTTCAACAGAGTTGTCCTCTTGTTCTACTTCCTCTTATCAAAGTGAGAAACCACTAAAAATGGTCGTGGAGAAGAAGGTTGAGCCAGAGGATAAAGC TAAAGCTTATCTCAGATTACAAACTGGGCCAGTTGCATTAAACTCATTGGAAAGGACCAATAGTACTGCATCACCTGTTTCAGTGCAAGATCCAGAAATA TGGCTGAGTGAACAAAACTCTTCTTCATCATATAGTTTTCCTAGAAAGTCTTTTAATTGAACTAAGACTATACCTTTTTTTTGGATAGACAAGACTATTC TTTCTTTCATCAAATAGTTGCTAATAAATCATGAACACCCCACATGTTTTATTGCCATTGCTAAGGTCATAGAGATAAAATTCTATAGTGAGGCTTTATT CACTCATAAAATTGATAATTTTTAAAGCAATTTTCATATTAATCTTTTTCCTCATGTTATGCTTTATTCAATTCTTCCACGACCAATTAAAGTTCCAAGT TTCTTCCAAATTCATCATTTCAAAACGACACATGTCTTCTTTTATCCCTTAAAATTCACAAGCTTTAATATTATAATGTCAACTTGAAAGATCTACCATT AGTGGTGGTTCGAACTTGTAGTTGAGAATTACACAAAGTAACAGGTTTTTTCCCTCTGACAACTTTGTCACTCATTATTTCCTTTGCAAGTGGGATATAT GTTTTTTTCATGACTCACTTTC
• Tissue: pods
• Gene name: LI_gene_191516;
• Additional information: details;

Expression of Ll_transcript_306338

FPKM

• PAB: 48.7
• PNAB: 3.3
• PS1: 3.9
• PS2: 1.6
• PS3: 3.1
• PW1: 7.6
• PW2: 8.6
• PW3: 10

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306338

• Blastp: Neutral ceramidase 1 from Arabidopsis with 75.99% of identity
• Blastx: Neutral ceramidase 1 from Arabidopsis with 76.5% of identity
• Eggnog: Ceramidase(ENOG410XQWE)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460497.1)
• Pfam: Neutral/alkaline non-lysosomal ceramidase, N-terminal (PF04734.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;