Ll_transcript_306341

• Id Trinity: TRINITY_DN52289_c1_g3_i13
• Name Transcript: Ll_transcript_306341
• Sequence: CTTCTATTTCAGGGGTCAATCACTTACTTCTCTCTCTCTCTCTCTATATATATATATATATGTATATATATATGCAACCCATTACTCTTGTTTTTCTAAA GATCGCAACTTTACATCTGGGTGGTGTGATTTAGGAAGGGAAATGTGAAGAACTTGCTAAGTTTGAAAAAGAGTTGGTCTTTTTTTTTTGCTGTGAACTT TCTTATGATGGAGTTCCCTACCGTTCCTCATTTGACGCGAGTCTGCACCCTTCTGTTGCTTATACTACTAATGAAGAGTGATATTGCCGTATATTCCAAT TCTGATTACTTGATCGGTCTTGGAAGCTATGATATAACGGGTCCTGCAGCTGATGTTAACATGATGGGGTATGCTAACCCAGAACAAGTTGCATCTGGTG TTCACTTAAGGCTGCGGTCTCGCGCTTTCATTGTTGCCGAACCACATGGTGACCGCGTAGTGTTTGTGAATCTTGATGCTTGTATGGCTTCACAGCTTGT GACTATCAAAGTACTTGAGAGGCTCAAAGCAAGATATGGTGATCTGTATACTGAAAATAATGTAGCTATTAGTGGAGTTCACACTCATGCTGGTCCTGGG GGTTATCTTCAGTATGTTGTTTATATTGTAACGTCTCTTGGATTTGTGCGCCAGTCATTTGATGCCCTTGTTGATGGCATTGAGAAAAGCATTGTCAAAG CCCATGAAAATCTCCGCCCAGGATCAATATTTGTCAATAAGGGAGAGCTCTTAGATGCTGGTGTAAATCGAAGTCCTAGTGCTTATCTCAATAATCCTGC TGCAGAGAGAAGCAAATATAAATATAATGTTGATAAAGAAATGTCTCTTTTAAAATTTGTTGATGCTGAATGGGGTCCCATGGGAAGCTTCAATTGGTTT GCTACTCATGGGACTTCAATGAGTCGTACAAACTCATTAATTAGCGGGGACAACAAAGGTTCTGCTGCTCGATTTATGGAAGACTGGTTCGAGCGAAAAG GCTCTGTAAAAACAGATTCTGTTGGATTTGAAGATGATAGCATCCCTCGAAGAATTTCAAACATAATTCCCAGCCTTGGCGAAAATCACCACAAGCTATT GGAAATTGCTTCCTCATTCCAATCTCCTCCTGGTAGCCCAGCAACCAGAACTTTGAGTGTTGCTAGACGCGTGAGAGGTGCTGTTAGTCAGGTGGACAAG CCCAGATTTGTATCTGCATTTTGTCAATCTAATTGTGGTGATGTTAGTCCAAATGTACTTGGAGCTTTTTGTACAGACACTGGACTACCTTGTGACTTCA ATCATAGTACATGTGGAGGGAAGAATGAATTATGCTATGGCCGTGGACCTGGTTACCCAGATGAATTTGAAAGTACACGTATCATAGGGGAGAGGCAATT TAAGAAAGCAGTGGATCTATTCAATGGAGCTTCTGAACAGATTAAAGGGAAGGTTGAATTTCGACATACCTACATAGATTTCTCCAAGCTCGAGGTAACT CTTTCCAAAGGAGGGGCTTCTGAGGTAGTGAAAACATGCCCTGCTGCAATGGGATTCTCATTTGCTGCTGGAACAACAGATGGACCTGGTGCTTTTGATT TTAAGCAGGGTGATGATAAGGGAAATCCTTTCTGGAACTTGGTCCGCGACTTACTTAAAACGCCAAACAAGGAACAAATAGACTGTCAATGGCCGAAGCC CATTTTGCTTGATACTGGTGAAATGAAGCTACCATATGACTGGGCACCCTCAATCCTTCCAATCCAGATCCTCAGAGTTGGGCAGTTTGTTATTCTCTCT GTACCAGGAGAATTTACAACAATGGCTGGAAGGCGTCTTCGTGATGCAGTGAAGGCAGTGTTAAGCGGTAACAATGACTTTGGTAGCAACATTCATGTTG TCTTAGCAGGGTTGACTAATACATATTCACAGTATGTGACTACATACGAAGAGTACCAGGTCCAAAGATATGAGGGTGCTTCCACGTTGTATGGTCCACA CACACTGAGTGCATACATTCAAGAGTTCAAGAAGCTAGCTAATGCTCTCATCAGTGACCAACCTGTAGAACCAGGTCCGCAACCACCAGATCTCCTGAAC CAGCAAATAAGCTTACTAACACCGGTGGTGGTGGATGGTACCCCTCTTGGTGTAAATTTTGGAGATGTGAGCATTGATGTACTGAAGAATGCAACCTTCA AGAAAGGGGAGAAGGTGAGTGTTACTTTCTGGTCGGCGTGCCCTCGTAATGACCTCATGACTGAAGGTACATTTGCCCTTGTGGAGTTTCTAGAAGGAAA GGATAGGTGGGTTCCAGCTTATGATGATGACGACTGGTGCTTGCGTTTTATATGGTCGAGACCTTCGAAACTGAGTTCACGTAGTAAAGCCACCATAGAG TGGAGAATCCCAGAGGATGCAACTCCTGGTGTATACAGAATAAAACATTTTGGTGCTGCAAAGAGCTTGTTAGGATCAATTCGTCATTTTACAGGCTCAT CAAGTGCATTTGTAGTAGCATAGCTAAGGGATAATTATGTTGTGTTCTAAAAGCTATTGCTACACTTGTTGGTTGTTACTCACTCTTGTTGGACTCAATT GTAAGGGATAATTATGTTGATATATTGATTATGGTGCCACTGTGTAACAGCATTTGCAAACTCCAAAAAGCAGTATGCGTTTGCCGGGAGTCGAACCCGG GTCTATTGCTTGGAAGGCAATTATCCTAACCGTTGGACTACAAACGCATTCATGAAATCATTCATGTGGTCATCAAATCATCATCTGCTTACCTAAAACT TGTGTGACATGTTTTTTGTTTCTAATTTGAACTCAAAGTTATACACCATTTTTATTCTAAG
• Tissue: pods
• Gene name: LI_gene_191516;
• Additional information: details;

Expression of Ll_transcript_306341

FPKM

• PAB: 17.4
• PNAB: 7.4
• PS1: 8.7
• PS2: 5.3
• PS3: 9.4
• PW1: 11
• PW2: 9.2
• PW3: 9.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_306341

• Blastp: Neutral ceramidase 1 from Arabidopsis with 76.12% of identity
• Blastx: Neutral ceramidase 1 from Arabidopsis with 76.8% of identity
• Eggnog: Ceramidase(ENOG410XQWE)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435719.1)
• Pfam: Neutral/alkaline non-lysosomal ceramidase, N-terminal (PF04734.12)
• Rfam: tRNA (RF00005)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;