Id Trinity | TRINITY_DN52289_c1_g3_i9 |
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Name Transcript | Ll_transcript_306334 |
Sequence | CTTCTATTTCAGGGGTCAATCACTTACTTCTCTCTCTCTCTCTCTATATATATATATATATGTATATATATATGCAACCCATTACTCTTGTTTTTCTAAA GATCGCAACTTTACATCTGGGTGGTCAGAATCTCAATTGCTATCTTTTACTCTCTTTGTTCCACTTATTCAATATCTTTCTTTCAAGTGTGATTTAGGAA GGGAAATGTGAAGAACTTGCTAAGTTTGAAAAAGAGTTGGTCTTTTTTTTTTGCTGTGAACTTTCTTATGATGGAGTTCCCTACCGTTCCTCATTTGACG CGAGTCTGCACCCTTCTGTTGCTTATACTACTAATGAAGAGTGATATTGCCGTATATTCCAATTCTGATTACTTGATCGGTCTTGGAAGCTATGATATAA CGGGTCCTGCAGCTGATGTTAACATGATGGGGTATGCTAACCCAGAACAAGTTGCATCTGGTGTTCACTTAAGGCTGCGGTCTCGCGCTTTCATTGTTGC CGAACCACATGGTGACCGCGTAGTGTTTGTGAATCTTGATGCTTGTATGGCTTCACAGCTTGTGACTATCAAAGTACTTGAGAGGCTCAAAGCAAGATAT GGTGATCTGTATACTGAAAATAATGTAGCTATTAGTGGAGTTCACACTCATGCTGGTCCTGGGGGTTATCTTCAGTATGTTGTTTATATTGTAACGTCTC TTGGATTTGTGCGCCAGTCATTTGATGCCCTTGTTGATGGCATTGAGAAAAGCATTGTCAAAGCCCATGAAAATCTCCGCCCAGGATCAATATTTGTCAA TAAGGGAGAGCTCTTAGATGCTGGTGTAAATCGAAGTCCTAGTGCTTATCTCAATAATCCTGCTGCAGAGAGAAGCAAATATAAATATAATGTTGATAAA GAAATGTCTCTTTTAAAATTTGTTGATGCTGAATGGGGTCCCATGGGAAGCTTCAATTGGTTTGCTACTCATGGGACTTCAATGAGTCGTACAAACTCAT TAATTAGCGGGGACAACAAAGGTTCTGCTGCTCGATTTATGGAAGACTGGTTCGAGCGAAAAGGCTCTGTAAAAACAGATTCTGTTGGATTTGAAGATGA TAGCATCCCTCGAAGAATTTCAAACATAATTCCCAGCCTTGGCGAAAATCACCACAAGCTATTGGAAATTGCTTCCTCATTCCAATCTCCTCCTGGTAGC CCAGCAACCAGAACTTTGAGTGTTGCTAGACGCGTGAGAGGTGCTGTTAGTCAGGTGGACAAGCCCAGATTTGTATCTGCATTTTGTCAATCTAATTGTG GTGATGTTAGTCCAAATGTACTTGGAGCTTTTTGTACAGACACTGGACTACCTTGTGACTTCAATCATAGTACATGTGGAGGGAAGAATGAATTATGCTA TGGCCGTGGACCTGGTTACCCAGATGAATTTGAAAGTACACGTATCATAGGGGAGAGGCAATTTAAGAAAGCAGTGGATCTATTCAATGGAGCTTCTGAA CAGATTAAAGGGAAGGTTGAATTTCGACATACCTACATAGATTTCTCCAAGCTCGAGGTAACTCTTTCCAAAGGAGGGGCTTCTGAGGTAGTGAAAACAT GCCCTGCTGCAATGGGATTCTCATTTGCTGCTGGAACAACAGATGGACCTGGTGCTTTTGATTTTAAGCAGGGTGATGATAAGGGAAATCCTTTCTGGAA CTTGGTCCGCGACTTACTTAAAACGCCAAACAAGGAACAAATAGACTGTCAATGGCCGAAGCCCATTTTGCTTGATACTGGTGAAATGAAGCTACCATAT GACTGGGCACCCTCAATCCTTCCAATCCAGATCCTCAGAGTTGGGCAGTTTGTTATTCTCTCTGTACCAGGAGAATTTACAACAATGGCTGGAAGGCGTC TTCGTGATGCAGTGATGGCAGTGTTAAGCAGCAACAAAGATTTTGGCAGCAACGTTCATGTTGTCTTAGCAGGGTTGACTAATACTTATTCACAGTATGT GACAACATACGAAGAGTACCAGGTCCAAAGATATGAGGGTGCTTCCACACTGTATGGTCCACACACACTGAGTGCATACATTCAAGAGTTCAAGAAGCTA GCAAAAGCTCTCATCAGTGACCAAAATGTAGAACCAGGTCCACAACCACCAGATCTCCTGAACCAGCAAATAAGCTTACTAACACCGGTTGTAGCGGATG GTACCCCTATCGGTGTAAACTTCGGAGATGTCATTGCTGACGTACCGAAGAACGCAACCTTCAAGAAAGGTGATAAGGTCACTGTTACTTTCTGGTCTGG GTGCCCTCGTAATGACCTTATGACTGAAGGCACATTTGCCCTTGTGGAGTTCCTCAGAGGAAAGGATACTTGGGTTCCTGCTTATGATGACGATGATTTC TGTTTGCGATTTATATGGTCGAGGCCGTGGAAACTCAGTTTACGCAGTAAAGCCACCTTAGAATGGCGAATCCCACAGGACGTAACTCCTGGTGTATACA GGTTAAAACATTTTGGTGCTGCAAAGAGCTTGTTAGAATCAATTCGTCATTTTACAGGGTCATCAAGTGCATTTGTAGTAACATGATAAAGGGGCATTGT AGTTTATATTTTACAGTTTACAATTATCACTATACTTATGACTTGTTGGACTGAGCTTTAGCAGAATACACTAAATCAAGGATCATAACTGTGTTCTCTA CTATTATCCATCACCTTTCCCTTGAGTATCATTCTATTATGAAAATCTGCATATGTAGGCACAACCGAACAAGATTAATGTAGACATGCTAATTGGTTGT ACTCATAGGCATGTGCCTATGTAAGTTTTATGGACAACAACATCCAACCAAAGTTTATTTTCCTCCCCAAGTGAAACCTGTTACATTGGTTTGAGATATA GCTGAAAAAAGTGGATTATTTTATGAAAGAACTTTTGGGCCTATAAAAAGTGGGATTTGTGCTTATGAAAATTATCAAGTCATCAGGATAAGAAAATCTT GAAAGACGATAAACAATTTTATGAACAATGCAGAGTAGAATTTGTTGATTCTCGAATACGTAGGTATAAAATGGGCTATATAAAACTGGCATGCCCCGTA ACCCACGTGTGGTATTTGAAACGTCTTCCTAGTTATATCGCGAATCTTTTAGATAAATCTCTGAAAGAATTAGAAGGTCTAGTATACTGCGATGTGTGAT TTGATCAAAATTCTTATTTTATTGTACAGATTCCGAATGAGAAACTGTTATTCCAGTCAATTGAATTGGCATGCCCCGGATCTGACATGTATGTCTCTTT GGCCGAGTAACATGAAGCTCAGAATTATGGGTATATTAAATACTCTAAAAAAAAAAAGGGGGGGGTTGGTCTATGGTCCATTCAGTAATAGCTGTTACCT CGTGAAAAAAAAAAAGCCTTTTTTGAAATTTTATATTCCATTTCTTTTTTTTAGAAAGAACTTTATTTAAGTTTCAATAAGCAAATATATCATGGTTACA GAAGTTCTATCCATCGCATATAGGCTTAAGGACATCGTGGCATAACCATCGAGGTGAAGTCTGGACCTAAAAGATCGAATCGAATGGAATGATACATAGA CAAGGAAATCTCTTATGAATTCCAGGATATCCCTTTAATTGTAAATTAAGAAGGTTCCTCATTCGAGGGGGGTAGACTACTCAAAAATTTTACATTTAAT TTCTGTTGTAATTGAAAATCGGACAAATAATTCATAAAATCGAAATAAAAAAAGAATGCATCAATGAAATGTTGCTTGGTCTTTATTGTATTGAAAAATT GAGTAAAGAGTAAAATAAAACTTTTTTTTTAGATTAGAGTTTATAGAACTTGAAAGCGGAAACCCCTTATTTGGTGTAACTACTTTAGCCGGATGAGAGG AAACTTTCACGTCCGATTTTGAAAGGGGGAGATCCTATTGGATAGGATCCTATCCAAATTTTTCGTTTGCTAGGCCCGTAGTTAAAAAACCCACTTTCTT ACGATTACGAGGTTTATTTGAATATGAAATCCAATCCTâBLAST |
Tissue | pods |
Gene name | LI_gene_191516; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_306334
Blastp | Neutral ceramidase 1 from Arabidopsis with 75.59% of identity |
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Blastx | Neutral ceramidase 1 from Arabidopsis with 76.27% of identity |
Eggnog | Ceramidase(ENOG410XQWE) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435719.1) |
Pfam | Neutral/alkaline non-lysosomal ceramidase, N-terminal (PF04734.12) |
Rfam | Intron_gpII (RF00029) |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |