Ll_transcript_305299

• Id Trinity: TRINITY_DN52290_c3_g2_i10
• Name Transcript: Ll_transcript_305299
• Sequence: CAAACATGTTGGTTTTGAAGCTCAGAGTTCTCTTTATTACTGTTTCTTTGTTAGAGAGACTACATTTTGTCCTTTTCTCACTCTGAATGAGAATGGAGAT AGAGATTCTTCTGCAACTTCGTTTGGTGCTTCTTCCTGAACAACGGTGTCGTTTTGCAACTACACTTCCATTCTTCAACTTCGCTTTGTAACTCATCTTT TCTTCTAACTTCTCTCTCTCTACATTTTCAATCTTCCGGATCCCTTCAACTTCTTCTCAAATCCACCGACTCACCTTACCTCAGGAGAGGGAATTCACTT ACTAATTGATGATATGGAGCAGTATGAAGTACTTGAGCAAATTGGAAAAGGTGCCTTTGGTTCTGCTCTTCTTGTGAGACATAAGCATGAGAAGAAAAAG TATGTTCTGAAGAAGATTCGGCTTGCTCGCCAAACTGAGCGCTCTCGTAGATCTGCACACCAGGAGATGGAGCTCGTCTCTAAATTGCAAAACCCATTTA TTGTGGAGTATAAGGATTCATGGGTGGAAAAGGGTTGCTATGTCTGCATTATTATAGGTTATTGTGAGGGTGGAGATATGGCGGAAGCTATAAAGAAAGC TAATGGGATCCTGTTTCCTGAGGAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCACTTAACTACTTGCACATGAACCACATTCTCCACCGTGAT GTCAAGTGTTCAAATATCTTCTTGACGAAAGATCGTGACATACGTCTTGGTGATTTTGGACTGGCCAAAATTTTGTCTTCTGATGATCTTACTTCCTCTG TTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGTTCTAAATCAGATATTTGGTCCTTGGGATGCTGTATATATGAAAT GGCATCACATAAGCCAGCATTCAAAGCATTTGATATACAAGCATTGATTAACAAGATTAATAAGTCCATAGTGGCTCCTTTGCCAACAAAATATTCTGGT TCATTGTAAGTCCTTGTTCTTTCATCGTGCAGATAATTTGGCTGATCCTGCCATGTGCAAATTGCATGATCGTGTCTTACACTGTTAGATTTAGCATTTT CACAAACCTAGTGCCAAAACCCCAAAGTTTACCAAAGGCAGCGGCTGAGGCTTAGCTAAAGATAATTCAAAGTGGGGCTTCTTGTAACTTTATAGTAATA AATTATTATTATTTATTACTATTATGGACTGTATCATTGATGGTTGATCTAGTTATATTATTTCCCCTTTTGGCAGTCGAAGTCTTGTTAAAAGCATGTT GCGGAAAAATCCAGAGCTCAGACCCAGTGCTGCAGAGCTGCTTGGGCACCCATATCTTCAACCCTATGTTCGAAAGGTCCATCTCAAAATCAATAGCCCC AGGCGAAGTTCGTTACCAGTTCACTGGCCAGAATCCAACTACCAGAAGAAAACTAGATTTGTCGATCCTGAAGATGATCGAATTCCCACCTATGAGGATA ACCGGTATTCTTTCTGCAATGACCGGACTCTAAATCCTTGTGTATTTGGAGCTTATCAAGATTCTGTATGCTCTACCCTTGAAATAGATTGTATTCCAGA TCATACAAATCAACGGATAGCAGAATTAGGTGTTGGAGATAGTCATGAAGTGAAGTCAAACGTTAAGCCAGTTGTTTCCAGAACTTCTAGTATTGCAAAG GCTCCAAGACTCACTTTATCGAAAGCTCCTGCCACCCACAAGAAATCAATAAAACACTCAAAGAATCATGAGCTTCCTATATCACACAGTACCAAAAAAA CTGTCCATACAACTCGCAGAGCATCATTGCCGTTGCCACAAAGTCGTGCCATTCAACAGCCTTCTCGAAGGGCCACTATTGCTTTATCTAGCAATGTAAA TTCACCCAATATTTCAGTTAACGCACCGCATATTGATAAGATGGCAGAATATCCATTAGCGTCATATGAAGATAAATTGTTTCCCACCAGTAGGGCTTCA CCAACCTCTGCTCATTGTTCCTCAAGCTTCCGTCCATGTAGCAATGATTCGACTATGATAGACAAATGCACAGTCGAGGTATGTAGTATACCACCCGTCA GGCCTAGTTGTTCTGATACGTGGCAGGGAATCCAGCGCAACATGCTCAAGGAAAATGATGAGGACAAAAGTGGCTCATATGATAAAAATGCAACTGCTGG AGCATCAAGCCACAACTCTTCAGACTTGCGTCGCCGGCAGTTTGACACTTCATCATTCCAACAAAGGGCTGATGCCTTGGAGGGATTGCTTGAGTTTAGT GCAAGATTACTACAGCAGGAAAGATTGAATCATTTGCTGGCTCTGTAGCATTAGCATGGGAACTCAATAGTATGACTCACTATTAACCATGATGCTGCCA AAGGAATCGTGCCCACCATCTTTCGTTGACCCATAGTGGTTAGCAATCCAATGATCGAAGCTTCTTTGATCAAAGCGTGAGGACTCAGAGGATACACTAT GCCTTGGACCATTCAGCTTACTTTATTTTTTCTTTTGAGACCTTTGTGGTGAGGACTTTCTCTATGTTGCGGAGGCTGTTTTCCGAGAAGATTTGCTTCT TCTACCATCTGAATTCTGTGAATTCGGGTTCTAACTTGGATAGCCATCAATGCATGCATGCCACGCAGTGTAGCAGTTGTTTGCTTCCTTACAAGGTATC CCCTTACCAGTGCTTGTAACTTGACTAATCCCCTTAAAGCATGCAATGCTCTCCTTGCCTGAAAATTACATGTAGCATGTTCATCAGAAACCTAGTCCAA ATGTTTGAGCATAGAAATAGTAATATAGTGTAAAGAAAGCTTCTGAAAGTGGGGACCCTTGAACATATAGGCATTTACTTCCTACCTATGATATCTTTTT CGAAAACTTACTGCATAAACACTTAATTAAACCGTCTATCCAAATGTGTCCTTAGTCGTAGAGGCTTTGATACTGTATCACGGATCATCTTTCCCAACAA CTTTAAGAGTTGTTAGAAGAAGATAAATGAATGATTTTGTTTTCTCCAACAAATGATGAATCTAGAACAATGTGAGCATGAACATAAAAAGAAAATCATA CCAAATATGAGCGAAAGGCGGCCTGAATCTTCGTAGCAGCTACACTTTTATCTTTTCGGTATCTAGAAATCTTCGATAGTATTGTTGGAAGACTCTTCGA ATCACGCGTTTCCAACAAGGCTTGGATTTGAAATTTAGCAGAATCACCTGAGTCAAAAGATATAGAAAACTTATGCCCTGCTACCATGTTTGTTTTCCTT CCACTTCCACCTCTTAATCTTCCGAAACTCCATCGACGCTTCATATTAGGACTTATCATTTGACTTTCAATCATGCTAGCACTCTTATTCTCTGAGTAAA ATGTATCAATCTTCTTGTGCTTCTCTTCCTTTTTCCCTAGTAGAAAGTTTCTAATCCATTTCCCTGCCTTTCCCATTTCTATTTTTCTATTTAGTGGAAC CTAGTAGCGTCTAAAGATCCAAAAAGCCACTTAGGTTCTTATAATCCTTTTGCCTCAAATATACATAAAGAGAAATAGCTAAACATAAAGTATATCACTT CTTTTTGTTCAAATGTTATGTTTTAATCTTGTTATAAGTGCAATATATATGTAGCATTCTTGTACAACTTGTTGAGTATGACTCTTCTTTCTTTGGTTCT TGTGTTGATATTTAACTGAATAAAGTATCTCCTAGTATAATGATGACACATGTCTTATTTTATCATTTTCTATAAAAATATTTCTAAAACTAAACAAAAT AGTACATGTGTCGTACTTTTACTGGCTGAAGGGGATAAATTATCTTATTATATGAGGAGATGCATTATTCTCTTTAACTATATTTATTTATTATTTGCCT TTGGCCTGCAAGGTTTTACCTTATATAGATAGCTACTTGCTACCCTTATTGAGTTTCTTGAATATAATTTTGGGGAATGTTCCAATTCTACATTGCCTCA GCATAATCTTCAAGAGCCTTAAATTTTAGGGGACCATGCTGTTAAAAAAATGTAATAAAATATATTCTAGCAGTTAGATAAGGGAATAAATTCATTGACA TTGCCTCTCTATAGAGGAATAAAATTAAATGATAGTGGCTCTCTCTATATACAAGAAGTCAGAAAATGTCACTGTTGGAATGAGTTATGACATATATAAA TAACCCTTAGTTTCTGTAATGATGTTAAGCTAAATAATAAATGCATGTTTTAGAAACAATTAAGAGTAGAACTGTCTTTATTATGTCAATGTCAACATTA GAAGATGAATAAGCAAAGTTTATTCAAGTGTGAAGTCCCACGTTAGATATGAGATGAGAAGTGGAAGAATTTATCAGTGGAAAAGGCTCATAAAATTAAT TTCTCAAAGTTTTGGTTCAAGACGTGGTGTCTCATTTGTGATTTTTCACTCTTTTTATGTCTTGTAACAAT
• Tissue: pods
• Gene name: LI_gene_191531;
• Additional information: details;

Expression of Ll_transcript_305299

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.2
• PS2: 0
• PS3: 0.1
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_305299

• Blastp: Serine/threonine-protein kinase Nek2 from Oryza sativa with 85.28% of identity
• Blastx: Serine/threonine-protein kinase Nek2 from Oryza sativa with 86.03% of identity
• Eggnog: NIMA-related kinase(ENOG410Y7JF)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419353.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;