Ll_transcript_305303

• Id Trinity: TRINITY_DN52290_c3_g2_i12
• Name Transcript: Ll_transcript_305303
• Sequence: CAAACATGTTGGTTTTGAAGCTCAGAGTTCTCTTTATTACTGTTTCTTTGTTAGAGAGACTACATTTTGTCCTTTTCTCACTCTGAATGAGAATGGAGAT AGAGATTCTTCTGCAACTTCGTTTGGTGCTTCTTCCTGAACAACGGTGTCGTTTTGCAACTACACTTCCATTCTTCAACTTCGCTTTGTAACTCATCTTT TCTTCTAACTTCTCTCTCTCTACATTTTCAATCTTCCGGATCCCTTCAACTTCTTCTCAAATCCACCGACTCACCTTACCTCAGGAGAGGGAATTCACTT ACTAATTGATGATATGGAGCAGTATGAAGTACTTGAGCAAATTGGAAAAGGTGCCTTTGGTTCTGCTCTTCTTGTGAGACATAAGCATGAGAAGAAAAAG TATGTTCTGAAGAAGATTCGGCTTGCTCGCCAAACTGAGCGCTCTCGTAGATCTGCACACCAGGAGATGGAGCTCGTCTCTAAATTGCAAAACCCATTTA TTGTGGAGTATAAGGATTCATGGGTGGAAAAGGGTTGCTATGTCTGCATTATTATAGGTTATTGTGAGGGTGGAGATATGGCGGAAGCTATAAAGAAAGC TAATGGGATCCTGTTTCCTGAGGAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCACTTAACTACTTGCACATGAACCACATTCTCCACCGTGAT GTCAAGTGTTCAAATATCTTCTTGACGAAAGATCGTGACATACGTCTTGGTGATTTTGGACTGGCCAAAATTTTGTCTTCTGATGATCTTACTTCCTCTG TTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGTTCTAAATCAGATATTTGGTCCTTGGGATGCTGTATATATGAAAT GGCATCACATAAGCCAGCATTCAAAGCATTTGATATACAAGCATTGATTAACAAGATTAATAAGTCCATAGTGGCTCCTTTGCCAACAAAATATTCTGGT TCATTCCGAAGTCTTGTTAAAAGCATGTTGCGGAAAAATCCAGAGCTCAGACCCAGTGCTGCAGAGCTGCTTCGGCACCCATATCTTGAACCTTATGTTC ATAAGGTCCATCTCAAAATCAATAGCCCCAGGCGAAATACATTACCTGTTCATTGGCCAGAATCCAACTATGTGAAGAAGACTAGGTTTGTGGATCCAGA AGATGATCTTATTCCTACCTATAGGGATAGGCGGTATTCTTTCTGCAATGGTCAGACTCTAAATCCGAGTGTATCTGGAGCTGATCAAGATTCTGTATGC TCTACCCTAGAAATAGATTGTATTCCGGATCATATGAATCAAAGGTTAGCAGAATTATATGTTGGAGATAGCCATGAAGTGAAGTCAATTCACAAGCCTG TTTCCAGAACTTCTAGTATTCCTAGTACTATAAGGCCACCTCCATCTAAAGTTTCTGTCACCAAGAAGAAATCAATGGAATCCTCAAAGAATCATAAAGT GCTCCCTGTTTCACGCACTACAACAAAATCTTCCCATACAAACCGCAGAGCATCATTTCCACTGCCAATGGATGGTATGCCGCAGCCTTCCCGTAGGTCC AGTATTGGTCTGCTTAGCCATGTGTCTTCGCCAGATATCTCAGTCAACTCTCCCCGTATTGATAAGATAGCTGAGTTTCCGTTAGCATCATATGAAGATT CATTATTCCCCATCAATAGAACATCAACATCTGCACAAGGTTCTTCTGGCAACCCATCACGTGGCAATCATTCAACTGTGATAGACAAATGTACAGTAGA GGTATATGATAGACCTAGCTGTACAGATGCTTGGCAGGGAATAAAGCGCAGCATGCTAAAGGAAATCAATGAGGGTAAAAGTGGTTCCTCTGATCAAAAT GCAACAGCAGGTCCATCAAGCCACACCTCTTCAGACTTGCGCCGCCGACAATTTGACACCTCATCATTCCAACAAAGGGCTGAAGCCTTAGAAGGGTTGC TAGAATTTAGTGCAAGATTGCTCCAGCAGGCAAGGTATGACGAACTTGGGGTTTTGCTGAAACCATTTGGGCCCGAAAAGGTTTCCCCAAGGGAAACTGC TATCTGGTTGAGTAAGAGCATCAAAGAGAACACTCTCAGCCCTGAAGAATCTCCCTAATCTGCTAAATCTGTACTGTAGCCATAATTGTAGAGTTGGATT GTGTCTTTTCTCACATGGGAACATGTAGCCAGTTTATTTTTGTTGGTTATCAAACCTTAGTTTACCCTTTTCTTTCTCACATTACTGAACCCTTCTTTCC ATATGAATGAGGCAGACAATAGATATTTTCATGATTACTCCTTGCAAGGAGTATTTTAATTATCATGACTTGAAACCATCTTCTAGAGTAATTTTCTCAG TATTATTTTCTTTTTTGTTTCTTGACTGGGAGTAATTGAGCATGTAGTTTTGACAACTACCTTTGTTCCTAATAGAACCAAAAACTTCACTGCCATCATT TGAACTATTGCAAAACTCTGTTGGCATCACTCTAGTTCCTTTGTTTGTAG
• Tissue: pods
• Gene name: LI_gene_191531;
• Additional information: details;

Expression of Ll_transcript_305303

FPKM

• PAB: 0
• PNAB: 18.4
• PS1: 13.9
• PS2: 4.4
• PS3: 4.3
• PW1: 8.6
• PW2: 2.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_305303

• Blastp: Serine/threonine-protein kinase Nek2 from Oryza sativa with 61.23% of identity
• Blastx: Serine/threonine-protein kinase Nek2 from Oryza sativa with 59.93% of identity
• Eggnog: NIMA-related kinase(ENOG410Y7JF)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452213.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;