Id Trinity | TRINITY_DN52290_c3_g2_i18 |
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Name Transcript | Ll_transcript_305311 |
Sequence | CAAACATGTTGGTTTTGAAGCTCAGAGTTCTCTTTATTACTGTTTCTTTGTTAGAGAGACTACATTTTGTCCTTTTCTCACTCTGAATGAGAATGGAGAT AGAGATTCTTCTGCAACTTCGTTTGGTGCTTCTTCCTGAACAACGGTGTCGTTTTGCAACTACACTTCCATTCTTCAACTTCGCTTTGTAACTCATCTTT TCTTCTAACTTCTCTCTCTCTACATTTTCAATCTTCCGGATCCCTTCAACTTCTTCTCAAATCCACCGACTCACCTTACCTCAGGAGAGGGAATTCACTT ACTAATTGATGATATGGAGCAGTATGAAGTACTTGAGCAAATTGGAAAAGGTGCCTTTGGTTCTGCTCTTCTTGTGAGACATAAGCATGAGAAGAAAAAG TATGTTCTGAAGAAGATTCGGCTTGCTCGCCAAACTGAGCGCTCTCGTAGATCTGCACACCAGGAGATGGAGCTCGTCTCTAAATTGCAAAACCCATTTA TTGTGGAGTATAAGGATTCATGGGTGGAAAAGGGTTGCTATGTCTGCATTATTATAGGTTATTGTGAGGGTGGAGATATGGCGGAAGCTATAAAGAAAGC TAATGGGATCCTGTTTCCTGAGGAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCACTTAACTACTTGCACATGAACCACATTCTCCACCGTGAT GTCAAGTGTTCAAATATCTTCTTGACGAAAGATCGTGACATACGTCTTGGTGATTTTGGACTGGCCAAAATTTTGTCTTCTGATGATCTTACTTCCTCTG TTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGTTCTAAATCAGATATTTGGTCCTTGGGATGCTGTATATATGAAAT GGCATCACATAAGCCAGCATTCAAAGCATTTGATATACAAGCATTGATTAACAAGATTAATAAGTCCATAGTGGCTCCTTTGCCAACAAAATATTCTGGT TCATTCCGAAGTCTTGTTAAAAGCATGTTGCGGAAAAATCCAGAGCTCAGACCCAGTGCTGCAGAGCTGCTTGGGCACCCATATCTTCAACCCTATGTTC GAAAGGTCCATCTCAAAATCAATAGCCCCAGGCGAAGTTCGTTACCAGTTCACTGGCCAGAATCCAACTACCAGAAGAAAACTAGATTTGTCGATCCTGA AGATGATCGAATTCCCACCTATGAGGATAACCGGTATTCTTTCTGCAATGACCGGACTCTAAATCCTTGTGTATTTGGAGCTTATCAAGATTCTGTATGC TCTACCCTTGAAATAGATTGTATTCCAGATCATACAAATCAACGGATAGCAGAATTAGGTGTTGGAGATAGTCATGAAGTGAAGTCAAACGTTAAGCCAG TTGTTTCCAGAACTTCTAGTATTGCAAAGGCTCCAAGACTCACTTTATCGAAAGCTCCTGCCACCCACAAGAAATCAATAAAACACTCAAAGAATCATGA GGTAAAGCAAGCTGGAGTGCATCATGTTTTAATATTTGCGACAGTATATTCATGAAACAAACTTAAGCATGTCACCTATGTTATGTTCTAATTTAATGTT GGTCACAGCATATATTCATTAAACAAACTTAAGCATGCCAGCTTTGTTCTGTGGGTGGTTACAATGGACTACTCTTGCACCGGTAATATCATTTTCTCAA TTACGAATTTAAGATGTCTGACTTTCTAAAACTCATTGACGCAGCTTCCTATATCACACAGTACCAAAAAAACTGTCCATACAACTCGCAGAGCATCATT GCCGTTGCCACAAAGTCGTGCCATTCAACAGCCTTCTCGAAGGGCCACTATTGCTTTATCTAGCAATGTAAATTCACCCAATATTTCAGTTAACGCACCG CATATTGATAAGATGGCAGAATATCCATTAGCGTCATATGAAGATAAATTGTTTCCCACCAGTAGGGCTTCACCAACCTCTGCTCATTGTTCCTCAAGCT TCCGTCCATGTAGCAATGATTCGACTATGATAGACAAATGCACAGTCGAGGTATGTAGTATACCACCCGTCAGGCCTAGTTGTTCTGATACGTGGCAGGG AATCCAGCGCAACATGCTCAAGGAAAATGATGAGGACAAAAGTGGCTCATATGATAAAAATGCAACTGCTGGAGCATCAAGCCACAACTCTTCAGACTTG CGTCGCCGGCAGTTTGACACTTCATCATTCCAACAAAGGGCTGATGCCTTGGAGGGATTGCTTGAGTTTAGTGCAAGATTACTACAGCAGGAAAGATTGA ATCATTTGCTGGCTCTGTAGCATTAGCATGGGAACTCAATAGTATGACTCACTATTAACCATGATGCTGCCAAAGGAATCGTGCCCACCATCTTTCGTTG ACCCATAGTGGTTAGCAATCCAATGATCGAAGCTTCTTTGATCAAAGCGTGAGGACTCAGAGGATACACTATGCCTTGGACCATTCAGCTTACTTTATTT TTTCTTTTGAGACCTTTGTGGTGAGGACTTTCTCTATGTTGCGGAGGCTGTTTTCCGAGAAGATTTGCTTCTTCTACCATCTGAATTCTGTGAATTCGGG TTCTAACTTGGATAGCCATCAATGCATGCATGCCACGCAGTGTAGCAGTTGTTTGCTTCCTTACAAGGTATCCCCTTACCAGTGCTTGTAACTTGACTAA TCCCCTTAAAGCATGCAATGCTCTCCTTGCCTGAAAATTACATGTAGCATGTTCATCAGAAACCTAGTCCAAATGTTTGAGCATAGAAATAGTAATATAG TGTAAAGAAAGCTTCTGAAAGTGGGGACCCTTGAACATATAGGCATTTACTTCCTACCTATGATATCTTTTTCGAAAACTTACTGCATAAACACTTAATT AAACCGTCTATCCAAATGTGTCCTTAGTCGTAGAGGCTTTGATACTGTATCACGGATCATCTTTCCCAACAACTTTAAGAGTTGTTAGAAGAAGATAAAT GAATGATTTTGTTTTCTCCAACAAATGATGAATCTAGAACAATGTGAGCATGAACATAAAAAGAAAATCATACCAAATATGAGCGAAAGGCGGCCTGAAT CTTCGTAGCAGCTACACTTTTATCTTTTCGGTATCTAGAAATCTTCGATAGTATTGTTGGAAGACTCTTCGAATCACGCGTTTCCAACAAGGCTTGGATT TGAAATTTAGCAGAATCACCTGAGTCAAAAGATATAGAAAACTTATGCCCTGCTACCATGTTTGTTTTCCTTCCACTTCCACCTCTTAATCTTCCGAAAC TCCATCGACGCTTCATATTAGGACTTATCATTTGACTTTCAATCATGCTAGCACTCTTATTCTCTGAGTAAAATGTATCAATCTTCTTGTGCTTCTCTTC CTTTTTCCCTAGTAGAAAGTTTCTAATCCATTTCCCTGCCTTTCCCATTTCTATTTTTCTATTTAGTGGAACCTAGTAGCGTCTAAAGATCCAAAAAGCC ACTTAGGTTCTTATAATCCTTTTGCCTCAAATATACATAAAGAGAAATAGCTAAACATAAAGTATATCACTTCTTTTTGTTCAAATGTTATGTTTTAATC TTGTTATAAGTGCAATATATATGTAGCATTCTTGTACAACTTGTTGAGTATGACTCTTCTTTCTTTGGTTCTTGTGTTGATATTTAACTGAATAAAGTAT CTCCTAGTATAATGATGACACATGTCTTATTTTATCATTTTCTATAAAAATATTTCTAAAACTAAACAAAATAGTACATGTGTCGTACTTTTACTGGCTG AAGGGGATAAATTATCTTATTATATGAGGAGATGCATTATTCTCTTTAACTATATTTATTTATTATTTGCCTTTGGCCTGCAAGGTTTTACCTTATATAG ATAGCTACTTGCTACCCTTATTGAGTTTCTTGAATATAATTTTGGGGAATGTTCCAATTCTACATTGCCTCAGCATAATCTTCAAGAGCCTTAAATTTTA GGGGACCATGCTGTTAAAAAAATGTAATAAAATATATTCTAGCAGTTAGATAAGGGAATAAATTCATTGACATTGCCTCTCTATAGAGGAATAAAATTAA ATGATAGTGGCTCTCTCTATATACAAGAAGTCAGAAAATGTCACTGTTGGAATGAGTTATGACATATATAAATAACCCTTAGTTTCTGTAATGATGTTAA GCTAAATAATAAATGCATGTTTTAGAAACAATTAAGAGTAGAACTGTCTTTATTATGTCAATGTCAACATTAGAAGATGAATAAGCAAAGTTTATTCAAG TGTGAAGTCCCACGTTAGATATGAGATGAGAAGTGGAAGAATTTATCAGTGGAAAAGGCTCATAAAATTAATTTCTCAAAGTTTTGGTTCAAGACGTGGT GTCTCATTTGTGATTTTTCACTCTTTTTATGTCTTGTAACAAT BLAST |
Tissue | pods |
Gene name | LI_gene_191531; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_305311
Blastp | Serine/threonine-protein kinase Nek1 from Arabidopsis with 65.78% of identity |
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Blastx | Serine/threonine-protein kinase Nek4 from Arabidopsis with 64.12% of identity |
Eggnog | NIMA-related kinase(ENOG410Y7JF) |
Kegg | Link to kegg annotations (AT1G54510) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429154.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |