| Id Trinity | TRINITY_DN52290_c3_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_305288 |
| Sequence | CTCTCATTTATCCATCTACATAAAAATCATAAATCTCTCCCAACTACACTAGTAAATTATTGCAATGTATTTCTCTTTACTACACTGAATGACAATGGCG AAAGAGATTCTTCTGCAACCTCTTCCTTAACAACGATGTCGTTTTGAAACTCCTCTTCCACTATTCAACTTCGCATTCTCCACTTTGTAATTCATATTCT CTTTTCCTTTCTTCTTTCTACATTTTCAATCTCTTGGATCCGTTCAGCTTCTTCTTAAACACAGTAACCAGGAGAGGAAATTATCTTACTAATTGATGAC ATGGAGCAGTATGAAGTACTTGAGCAAATTGGAAAAGGTGCTTTCGGTTCTGCTCTTCTTGTGAGACATAAGCATGAGAAGAAAAAGTATGTTCTGAAGA AGATTCGTCTGGCCCGCCAAACCGAGCGCACTCGTAGATCAGCACACCAGGAGATGGAGCTCATCTCTAAATTGCAAAACCCATTTATTGTGGAGTATAA AGATTCGTGGGTAGAAAAGGGTTGCTATGTCTGCATTATTATAGGTTATTGTGAGGGCGGAGATATGTAAGTCTCATTTCTCTCTGTTTTTTATGGCATG CAATTTAATGTTCTATTTTCTTTTAGCTTTGATATGTTGGAGCATGAATGTTTTTCAAAATACACTATTGATGTACCACAGGGCAGAAGCTATAAAGAAA GCTAACGGTGTCATGTTTCCTGAGGAGGTTTTTGATTAATTTTTTCTTTAAGAAATTATAATCCCCTTTTTATTTGAGGATAAGAATAAACGGAACATTT GGACTTTTGCATTTAAAACCTAAAAAGGGTAATTTGTTTGCAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCACTTAACTACTTGCACATGAAC CACATTCTCCACCGTGATGTCAAGTGTTCAAATATCTTCTTGACGAAAGATCGTGACATACGTCTTGGTGATTTTGGACTGGCCAAAATTTTGTCTTCTG ATGATCTTACTTCCTCTGTTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGTTCTAAATCAGATATTTGGTCCTTGGG ATGCTGTATATATGAAATGGCATCACATAAGCCAGCATTCAAAGCATTTGATATACAAGCATTGATTAACAAGATTAATAAGTCCATAGTGGCTCCTTTG CCAACAAAATATTCTGGTTCATTCCGAAGTCTTGTTAAAAGCATGTTGCGGAAAAATCCAGAGCTCAGACCCAGTGCTGCAGAGCTGCTTGGGCACCCAT ATCTTCAACCCTATGTTCGAAAGGTCCATCTCAAAATCAATAGCCCCAGGCGAAGTTCGTTACCAGTTCACTGGCCAGAATCCAACTACCAGAAGAAAAC TAGATTTGTCGATCCTGAAGATGATCGAATTCCCACCTATGAGGATAACCGGTATTCTTTCTGCAATGACCGGACTCTAAATCCTTGTGTATTTGGAGCT TATCAAGATTCTGTATGCTCTACCCTTGAAATAGATTGTATTCCAGATCATACAAATCAACGGATAGCAGAATTAGGTGTTGGAGATAGTCATGAAGTGA AGTCAATCCATAAATCTGTTTCCAGAACTTTTAGTTTTCCTAAAACTCGAAGACTGACTCCATGTAAAGTTTCTGTCACCAACAAGAAAGTAATGGAACC CTCTAAGAATCGTAAAGCAGCAACGCAAACTCTTCCTGTTTCACGCAACACCACAAAATATGCTCATGCCAACAACAGAGCATCATTTCCACGGCCAAGG GGTGGTACTCAGCAGCAGCCTTCCTACAGGTCCAATATTGGTTTGCTAAGCCATGTGTCTTCGCCAGACATCTCATTCAACTCTCCCATTTTTGATAAGA TAGCCGAGTTTCCATTAGCATCAAATGAAGATTCATTGTTTTTCGTCACTACAACACCGACATATGCACAGGATTCTGCTGGCTACCCACCCGGTGGCAA TCATTCAACTGTGATAGACAAATGCACAGTACAGGTATACAATAGACCTAGTTCTACAGATGCTTGGCAGGGAATCAAGCGCAGCATGTTAAAGGAAATC AATGAGGATAAAAGTGGTTCCTCTGACCAAAATGCAACAGCAGGTCCATTAAGCCACACTTCTTCAGACTTGCGCCGCCGACAGTTTGACACTTCATCAT ACCAACAAAGGGCTGAAGCCTTGGAAGGGTTGCTTGAATTTAGTGCAAGATTGCTACAGCAGGCAAGGTATGACGAACTAGGAGTTTTGTTGAAACCATT TGGGCCTGAAAAGGTTTCCCCGAGGGAAACTGCTATCTGGTTGAGTAAGAGCATCAAAGAGAACACTCTCAGCACTGAAGAATCCCTGTGAACTGCTATA GCGTCTAATGTAGTCATATTTGCGGAGTTTGGTATGTCATTTTCACACGGAAGCATTTAGCCAGATGGTTTTTTTGTAGGTTATCACTTTTAATTTACCC TTTTCTTTTATGAAGAAGACAACAGATATTTTCATGATTACGTTCTGCCTGACCGGTTTCGCAATTTATAATGGTCATAATTGATCTTTCACCGTGTCAT AATCCTTGTCATCTAGGGAAGAAAAGCAAAGGTTGCTATCACGACCTGAACCTATCTACTAGAATATTTTTCTGTCTTTTTTTGTTGTTGCTTAAATAGA CTGTACATCAGCTAAACTACTACAAAACAATGCCAGAGTTTTGGTCATGAATAGATGCAAGATGTTGCCCAATTTGGAGTAATTGAGCAAGTGGTGTACT TTTGGCAACTATCTTTGTTCCTAATAGAACCAAAATTTTCACTGGTGTCATCCAAGTTTTATACCTTGCATTCTTCCTTTTGAATATATTGATTTGGCTT TTAACTTGTAGCTATGACTATCAATGTAAGCCTATCTACTTCGGCTTGTTAATTTTCTGAAGCTTCATCAGTCTTCAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_191531; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_305288
| Blastp | Serine/threonine-protein kinase Nek1 from Arabidopsis with 56.77% of identity |
|---|---|
| Blastx | Serine/threonine-protein kinase Nek1 from Arabidopsis with 57.5% of identity |
| Eggnog | NIMA-related kinase(ENOG410Y7JF) |
| Kegg | Link to kegg annotations (AT1G54510) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429154.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |