Id Trinity | TRINITY_DN52301_c0_g1_i16 |
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Name Transcript | Ll_transcript_485981 |
Sequence | ACTAGATCAAAACACTTTCACTTTCACTTTCACTTCCATGGATCTGAATTGAGTTTCCAGAAACTTCCATAGATCCATCATGTCCAATTTCCTCTCTCAG TTCCAAGCTTTCAAGAACACTGTCAATCACCTTGTTATTGCAGTGGAGGATGTGAATGATTTGTGGCCAACTGTGAAGAATGCTTTTGAGGCAAGATTGC CATTCAAAAGGGCATCTTTGAATAACAAGACACGAAACTCTGTCTTCGTTGAGAAATTGCCAGCTGAGTTCATATTAACTACAGATTCGAGACTCCGAAG TCGTTTCCCGCAGGAGCAATTGTTGTCTTGGTTTCGAGAGCCGTATGCAACTGTTGTACTTGTTACCTGTGAGGATCTTGACGAGTTCAAAACCATCCTT AAACCTCGCCTGAAATTAATTGTCCAAAATGATGAGAGGGAATGGTTTATTGTATTTGTATCTAAAGCTCATCCAGCTAATGATCAGGCGAACAAAATGG CAAAGAAAGTATATGCTAAAATTGAAGTTGAGTTTAGCTCCAAAAAAAGAGAAAGATGTTGCAAATACGATATGCATTTCCCTGAAGCAAACTTTTGGGA AGATTTGGAATCAAAGATAATGGAATGCATCAGAAATACACTGGACAGGCGTGTACAGTTTTATGAGGATGAGATTCGAAAGCTTAGTGAACAGCGTCTC ATGCCAGTCTGGAACTTCTGTAATTTTTTCATTCTGAAGGAAAGCTTGGCATTTATGTTTGAAATGGCTCACCTTGATGAAGATGCCTTACGGGAATATG ATGAACTAGAACTCTGCTATCTTGAAACAGTTAACATGACCGGAAAGCAAAGGAACTTTGGAGGTGCAGACCATGGGGATGATCAAGCAGCATTGCTTAA TCCAGGAAACAAAGCATTGACACAGATTGTCCAAGAGGACTCGTTTAGGGAGTTTGAATTTAGACAATATCTATTTGCCTGTACATCAAAGCTCTTATTC AAGCTGAATCGTTCCTTTGAGGTTGCATCACGGGGTTATTCTTTCATAATAAGCTTTTCAAAATCTTTGGCATCACATGAGCATAGTCTGCCTTTTTGTA TGCGTGAAGTCTGGGTGATAACTGCTTGCTTGGCTTTAATTGAAGCAACAATTTCTCATTATAATGAAGGACATGTGGTGCCTGACATAGAGAAGGAGTT CTTTCGTCTTCTGGGTGACCTGTATTCACTTGCTAGAGTTAAGTTCTTAAGAATTGCATATTTAGTTGGGTATGGAACTGATATAGAAAGAAGTCCTGTC AACAGTGCTTCTCTCAGCTTACTTCCTTGGCCTAAGCCAGCAGTTTGGCCTTCTGTTCCCGCTGATGCATCAGTAGAGGTGCTTGAGAAAGAGAAGCTGA TTCTCCAAACAACTCCTAGAACCAAGCACTTTGGTATCCATAGGAAACCCCTGCCTCTTGAACCTACTGTACTTCTACGAGAGGCCAACAGGCGGAGGGC TTCACTTTCAGCTGGAAATGTGTTTGAAATGTTTGACAGTCGTCAGGTTACATTGGATGGATCACCATCACAAAAACTACATGCAAGTTCCATGATACGT ACTTATTCTTCACCAGGAAACGTTGATAGCTCAATTGACCGACCTATGAGGCTTGCTGAGATTTATATAGCCGCTGAGCATGCTTTGAAGCAAACCATTT CTAATCCAGAACTGTTGACATCATTATCATCATCCGAGGAGTTTGAGCAAAAATATTTGGAGCTAACTAAAGGTGCTGCTGACAATTACCATCGTTCCTG GTGGAAAAGACATGGAGTTGTCCTTGATGGTGAGCTAGCAGCAGTCGCCTTTAAGCATGGACATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGT GCACTTTATGCTGGTGAAGGATGGCAGGACTTGTTGGCTGAGGTCCTTCCCAGTTTAGCTGAGTGTCAGAAGATACTCAATGATCAAGCTGGCTACTTAC TATCCTGTGTGAGGTTACTTTCTCTTGATGAAGGACTATTTTTGACCAAGGAGCGTCAAGCGTTTCAGTCAGAAGTTCTACGTCTTGCTCATAGTGAAAT GAAGGACCCTGTACCTCTTGATGTATCATCATTAATTACATTTTCTGGCAATCCTGGGCCTCCGATGGAGTTATGTGATAGGGATCCTGGTTCCCTTTCT GTAACTCTTTGGAGTGGTTTTCCAGATGATATTACTCTTGATTCAATCAGTCTTACATTAACACCAACACACAATGCTGACGAAGGTGTGAAGGCATTGA AGAGTTCTACAGCTATCGTTTTACATCCTGGTCGGAATACTATTACCTTGGATCTACCACCTCAGAAACCAGGGTCATATGTTCTTGGAGTTCTTACTGG GCAGATTGGGCAGTTGAGGTTTAGATCTCATAGTTTTTCAAAAGGTGGTCCTGAAGATAGTGATGATTTTATGAGTTATGAAAGGCCAGCTAAACCTATT CTGAAGGTCGCCAAACCTAGAGCCCTCGTTGATCTTGAAGCTGCTGTTTCATCTTCCTTGTTAATAAATGAATATCAATGGGTTGGCATTTTAGTTCGAC CGATTAATTATTCTCTCAAAGCTGCTGTCTTGCATATTGATCCTGGTCCGGGATTAGAGATTGAAGACTCACATGTAATTGAGATGGAAAGCTCTTCCAG TGTGTTACAGAATGATGATGAGCAGGTACAGGAGGATGGTGCTCAAATAGGATCTTCGAATTCTGGAAAAAGGTCCGAATGTTTGTCTCTTCATGATGGT AAAATAGAGTTTCCAAGTTGGGCAAGTGACACACCTTCTACACTTTGGGTTCTGATTCGTGCCGTCGGTGACTCGCTCAGCAGAGGATCATCTTCAGCCA CCACTAGAACAGAGAATATTGTAGATGGAATGAGAACAGTAGCTCTGAAACTTGAATTTGGAGTATTCCACAATCAGATATTTGAAAGGACCCTTCCGGT GCATTTTACGTATCCTTTCTATGTTACGACCCGTGTTACTGATAAATGCAATGATGGTACCCTGCTTCTGCAGGTTATACTTCACTCTGAAGTAAAGGCT AAATTGACCATATATGATGCCTGGCTCAATCTTCAAGATGGATTTGTTCATACTGGAGAAAGTGAAGGTAGACCTAATTCTAGTGATTTCCCACTGGTCA TATCTCCCACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTAGGCATGACAAATGAAGAAGGTAATCACACTGGCAGATATCAATCAAACGATGTTAT TGTTGCTTTTTAATATATTAACAAATAATTTGGCAAGTGCCCTAACTTTCATAATTACTGTATGACAAGTGCCCTATAGCAATATGGATGAAGAATTTGG GAGCTGATAAACACAATTATTTCCTAGTGCAGGAAGTGTGTTTTTGTAATTCTAACCATTGCAAGTGTTACTGATTAGTTGACTTATTGTAGTTCAAGTT TAATAAATTCTGGCCCTCCATGGTTGTCAATAAACTCTGCTAGTTAATATCTTTATTCCCATGATGTTGCGAATTACATGTTGATATTTCTGAACATGAA AGAAAAACTATTTGCTTATGTATTAACCTGTAATCTATGCTTAGAACTAACAGTGTGGTTTCCAGTTTTTATTAGTTGCACAGGCACAATTGATAAGTGA TATATATGAAACTTGCTAAATCACATTTTCTTTTTATTCATTATGTTTTTCTTTAAGTGATTTTACGTATTATGGAAGAGTGGCATTAATCAATCACTTA TGTTCTATCCACACCTTTGAAAATATAAAAGCCTGATTTCTGCAATTAATCAACTGATTGATTTGTAACCCATAAAAATGCAGAAGCCACAAAGCAATCA GAAAGCATATTAAATATCAGATACGGAATTTCTGGCGATAGAACAATTGGAGCCCATCCCCCTCTCATGAATGAATCTACTAGAGTTGATGGTGCCAGAC AAGAATTGATTTTCAGGACCGCAATTGCTTTGCAAAGGCCTGTGCTTGATCCATGCCTAGCTGTTGGTTTTCTTTCTCTCCCTTTGGATGCCCTAAGAGT TGGGAAACTAGTAAAGATGCAATGGCGGGTGGAAAGGTTAAAAGATTTCGATAAAAAAGAAGTCTCTGAACATAATGATGAGGTGCTATATGAGGTAAAT GCTTATTCTGGAACTTGGATGATAGCTGGGAGGAAAAGAGGACATGTATCTCTCTCCAGAGAAGAAGGTGCAAGAATCACTATCTCAATTTTATGCATGC CACTGGTGGCTGGTTATGTGCGGCCACCAATACTTGGGCTGCCGGATGTTGATGATGCAGATATAAGCTGCAAACCTGCCGGACCACATCTTGTTTGTGT TTTGCCCCCAGCTCTCTGCTCATCCTACTGCATTCCAGTTGATTCACGAGCTTAGCAATGTCATTCCAGTCAAGTTTGATCCAGTTTTATTGTTCTATCA CCAGTCTGAAAATTTTACTTAGGTCCAGTCATATATAGAAGTGAACCATTTTTTCCGCCGGTTACGTTGTGTGAAAATCTTCATAGTTGGATTTGTGTTG CTTATGGCTCCAGAGTGCATTCAAATCTTGGAAACAACTTCTTCATTCAAGGATAAGGCTGTGTTCATCTATTCTTCTCAAACCCGACTAAGTGATAGGC CTTGTGCATTATCCGTCCTTTATGGCCTTTAGGCTGCATTCAGAGTATCTCAACAGCAACCCTGGTGCATGTACATTGGAAATTTGTGCTCTTCCTTGTA CCATAGATTAGAATATACGTGGAGGATAACATTCTTTTGTCTCTCATATATGGAATTAATTTTTTTTTGATAGAAACCAAAATATTGAAAAATTATCTAT TTTACTTCCTGCTTTAAGAGCAGAATTGCCAATTCATAATAAATTTAATTTATTTATGTTTGCCACGCCAAAGCATTTAACCTTTCC BLAST |
Tissue | pods |
Gene name | LI_gene_191605; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_485981
Blastp | Trafficking protein particle complex II-specific subunit 130 homolog from Arabidopsis with 74.53% of identity |
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Blastx | Trafficking protein particle complex II-specific subunit 130 homolog from Arabidopsis with 74.53% of identity |
Eggnog | trafficking protein particle complex(ENOG410XNVF) |
Kegg | Link to kegg annotations (AT5G54440) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456285.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |