Ll_transcript_485982

• Id Trinity: TRINITY_DN52301_c0_g1_i17
• Name Transcript: Ll_transcript_485982
• Sequence: CAAGACTTCACACTTTTCTCTCTCCGAACTCCAACTTCTCGGTTTAAACACTCACTCAACTTCCATTTCCATTTCCATGGATCTCAACTAAGTTTCTAGA AGCTTCTTCAGATCCGCAATGTCCAACTTCTTCTCTCAGTTCCAATCTATCAAGAACACCGCCGATCGCCTTGTCATTTCTGTGTTTTTGTTTTTTCAGT GGAGGATGTAAGTGACTTGTGGCCAATTGTTAAGGATGCTTTTGAGGCGCGATTGCCATTCAAAAGGGTGCCTTTGAATAACAAGACACGGAATCTTGTC TTTGTTGAGCAATTGCCAGCTGAGTTCATATTAACCACAGATTCAAGACTCCGTAGTCGGTTCCCTCAGGAGCAACTGTTATTTTGGTTTCGAGAGCCGT ATGCAACTGTTGTACTTGTTACCTGTGAGGATCTTGACGAGTTCAAAACCATCCTTAAACCTCGCCTGAAATTAATTGTCCAAAATGATGAGAGGGAATG GTTTATTGTATTTGTATCTAAAGCTCATCCAGCTAATGATCAGGCGAACAAAATGGCAAAGAAAGTATATGCTAAAATTGAAGTTGAGTTTAGCTCCAAA AAAAGAGAAAGATGTTGCAAATACGATATGCATTTCCCTGAAGCAAACTTTTGGGAAGATTTGGAATCAAAGATAATGGAATGCATCAGAAATACACTGG ACAGGCGTGTACAGTTTTATGAGGATGAGATTCGAAAGCTTAGTGAACAGCGTCTCATGCCAGTCTGGAACTTCTGTAATTTTTTCATTCTGAAGGAAAG CTTGGCATTTATGTTTGAAATGGCTCACCTTGATGAAGATGCCTTACGGGAATATGATGAACTAGAACTCTGCTATCTTGAAACAGTTAACATGACCGGA AAGCAAAGGAACTTTGGAGGTGCAGACCATGGGGATGATCAAGCAGCATTGCTTAATCCAGGAAACAAAGCATTGACACAGATTGTCCAAGAGGACTCGT TTAGGGAGTTTGAATTTAGACAATATCTATTTGCCTGTACATCAAAGCTCTTATTCAAGCTGAATCGTTCCTTTGAGGTTGCATCACGGGGTTATTCTTT CATAATAAGCTTTTCAAAATCTTTGGCATCACATGAGCATAGTCTGCCTTTTTGTATGCGTGAAGTCTGGGTGATAACTGCTTGCTTGGCTTTAATTGAA GCAACAATTTCTCATTATAATGAAGGACATGTGGTGCCTGACATAGAGAAGGAGTTCTTTCGTCTTCTGGGTGACCTGTATTCACTTGCTAGAGTTAAGT TCTTAAGAATTGCATATTTAGTTGGGTATGGAACTGATATAGAAAGAAGTCCTGTCAACAGTGCTTCTCTCAGCTTACTTCCTTGGCCTAAGCCAGCAGT TTGGCCTTCTGTTCCCGCTGATGCATCAGTAGAGGTGCTTGAGAAAGAGAAGCTGATTCTCCAAACAACTCCTAGAACCAAGCACTTTGGTATCCATAGG AAACCCCTGCCTCTTGAACCTACTGTACTTCTACGAGAGGCCAACAGGCGGAGGGCTTCACTTTCAGCTGGAAATGTGTTTGAAATGTTTGACAGTCGTC AGGTTACATTGGATGGATCACCATCACAAAAACTACATGCAAGTTCCATGATACGTACTTATTCTTCACCAGGAAACGTTGATAGCTCAATTGACCGACC TATGAGGCTTGCTGAGATTTATATAGCCGCTGAGCATGCTTTGAAGCAAACCATTTCTAATCCAGAACTGTTGACATCATTATCATCATCCGAGGAGTTT GAGCAAAAATATTTGGAGCTAACTAAAGGTGCTGCTGACAATTACCATCGTTCCTGGTGGAAAAGACATGGAGTTGTCCTTGATGGTGAGCTAGCAGCAG TCGCCTTTAAGCATGGACATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCACTTTATGCTGGTGAAGGATGGCAGGACTTGTTGGCTGAGGT CCTTCCCAGTTTAGCTGAGTGTCAGAAGATACTCAATGATCAAGCTGGCTACTTACTATCCTGTGTGAGGTTACTTTCTCTTGATGAAGGACTATTTTTG ACCAAGGAGCGTCAAGCGTTTCAGTCAGAAGTTCTACGTCTTGCTCATAGTGAAATGAAGGACCCTGTACCTCTTGATGTATCATCATTAATTACATTTT CTGGCAATCCTGGGCCTCCGATGGAGTTATGTGATAGGGATCCTGGTTCCCTTTCTGTAACTCTTTGGAGTGGTTTTCCAGATGATATTACTCTTGATTC AATCAGTCTTACATTAACACCAACACACAATGCTGATGAAGGTGTAAAGGCGTTGAAGAGTTCTACAGCTATTGTCTTGCATCCTGGTCGGAATACTATT ACCTTGGATCTACCACCTCAGAAACCAGGGTCATATGTTCTTGGAGTTCTTACTGGTCAGATTGGACAGCTGAGTTTTAGATCTCATAGTTTTTCAAAAG TTGGTCCTGCAGATAATGATGATTTTATGAGTTACGAAAAGCCAGCTAAACCTATTCTGAAGGTTGCCAAACCTAGAGCACTCGTTGATCTTGAAGCGGC TGTTTCATCTGCCTTGTTAATAAATGAGCATCAATGGGTTGGCATTTTAGTTCGACCTATAAATTACTCTCTCAAAGCTGCTGTCTTGCATATTGATACT GGTCCCGGATTGGAGATTGAAGATTCACATGTAATTGAGATGGAAAGCTATTCCAGTGTATCACAGAATGATGATGTACAGGTTCAGAAAGACGGTTCTC TAATAGGATCTTTGAATTCTGGAAAAAAATTTGAACGTTTGTCTCTTCAAGATGGTAAAATAGAGTTTCCAAATTGGGCAAGTGAGACACCTTCTACTCT TTGGGTTCTGATTCGAGCCGTCAGTGAGACGCTCAGCAGAGGATCGTCTTCAGCCGCAACTAGAAGTGAGAGTATTGTAGATGGAATGAGAACAATAGCT CTGAAACTTGAATTTGGAGTATTCCACAATCAGATATTTGAAAGGACCCTAGCAGTTCATTTTACATATCCTTTCTATGTTACAACGTGTGTTACTGATA AATGCAATGACGGTACCCTGCTTCTTCAGGTTATACTTCACTCTGAAGTAAAGGCTAAACTGACCATATATGATGCCTGGCTCGATCTTCAAGATGGATT TGTACATAGTGGAGAAACGGAGGGTAGACCTACTTCAAGTGACTTCCCACTAGTCATATCTCCCACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTT GGCAAGACAAATGAACAAGAAGCCAGAAAGCAATCAGAAAGCATATTAAATATCAGATATGGAATTTCCGGCGATAGAACAATTGGAGCCCACCCTCCTC TCATGAATGAGTCTACTATAGTTGATGGTGCCAGACAAGAGATGATCTTCAGGAGCGTTATTACTTTGCAAAAGCCTGTGCTTGATCCATGCCTAGCTGT TGGTTTTCTTCCTCTCCCTTCAGATGGCCTAAGAGTTGGGCAACTAGTCAAGATGCAATGGAGGGTGGAAAGGTTAAAGGATTTGGATAAAAAAGAAATC TCTGAACAGAATGCTGAAGTGCTATATGAGGTAAATGCTAATTCAGGAAATTGGATGATAGCTGGGAGGAAAAGAGGGCATGCATCTCTCTCTACGAAAC AAGGTGCAAGGATCGTTATCTCAATTTTATGCATGCCACTGGTGGCTGGTTATGTACACCCGCCAATACTTGGGCTACCGGATGTTGATGACACTGATAT AAGCTGTAAACCTGCCGGACCACATCTTGTTTGTGTTTTACCCCCAGCTCTCAGCTCATCCTTCTGCATTCCAGTTAATTCATGAGCTTAGCAATCCTTT CCACTCAACTTTCATTGAGTTTTTGTGTTCTATTACCAGTCTGAGAAAATTTTACTTAGGTTCAGTCAAGTAGCAAAGTGTGACATTTCCCTTAGCATGT TTTCTTTGTTGTGTGAAAATCTCCATAGGTGGATTTGTGTTGCTTATGGCCTTTATAGGCAGTGTTCAGAGTATCAGCAGCAACTTTAGAGCGCATGTAG GAAATGTGTGCTCTTACTTGTACACCATAGAATAGATAGAGATCATTGCATTCTTTTTGTCTCATGAAATGATAAAATTTGGCAGGAACAAAAATGTTCA AACTTTGTCAATTTTACTCGCTCCTTGAAAACCATAATTGCCAATTCACAATGACTTCAATTTTTTTTTTGCCTTAAAACGTTACTCAATTTCATAATAC CATTTTTGTTGGAAAA
• Tissue: pods
• Gene name: LI_gene_191605;
• Additional information: details;

Expression of Ll_transcript_485982

FPKM

• PAB: 1.3
• PNAB: 12.2
• PS1: 11.2
• PS2: 5.7
• PS3: 10.7
• PW1: 8.7
• PW2: 9.2
• PW3: 6.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485982

• Blastp: Trafficking protein particle complex II-specific subunit 130 homolog from Arabidopsis with 72.41% of identity
• Blastx: Trafficking protein particle complex II-specific subunit 130 homolog from Arabidopsis with 73.15% of identity
• Eggnog: trafficking protein particle complex(ENOG410XNVF)
• Kegg: Link to kegg annotations (AT5G54440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443977.1)
• Pfam: Trafficking protein particle complex subunit 10, TRAPPC10 (PF12584.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;