Id Trinity | TRINITY_DN52301_c0_g1_i9 |
---|---|
Name Transcript | Ll_transcript_485974 |
Sequence | ACTAGATCAAAACACTTTCACTTTCACTTTCACTTCCATGGATCTGAATTGAGTTTCCAGAAACTTCCATAGATCCATCATGTCCAATTTCCTCTCTCAG TTCCAAGCTTTCAAGAACACTGTCAATCACCTTGTTATTGCAGTGGAGGATGTGAATGATTTGTGGCCAACTGTGAAGAATGCTTTTGAGGCAAGATTGC CATTCAAAAGGGCATCTTTGAATAACAAGACACGAAACTCTGTCTTCGTTGAGAAATTGCCAGCTGAGTTCATATTAACTACAGATTCGAGACTCCGAAG TCGTTTCCCGCAGGAGCAATTGTTGTCTTGGTTTCGAGAGCCGTATGCAACTGTTGTACTTGTTACCTGTGAGGATCTTGACGAGTTCAAAACCATCCTT AAACCTCGCCTGAAATTAATTGTCCAAAATGATGAGAGGGAATGGTTTATTGTATTTGTATCTAAAGCTCATCCAGCTAATGATCAGGCGAACAAAATGG CAAAGAAAGTATATGCTAAAATTGAAGTTGAGTTTAGCTCCAAAAAAAGAGAAAGATGTTGCAAATACGATATGCATTTCCCTGAAGCAAACTTTTGGGA AGATTTGGAATCAAAGATAATGGAATGCATCAGAAATACACTGGACAGGCGTGTACAGTTTTATGAGGATGAGATTCGAAAGCTTAGTGAACAGCGTCTC ATGCCAGTCTGGAACTTCTGTAATTTTTTCATTCTGAAGGAAAGCTTGGCATTTATGTTTGAAATGGCTCACCTTGATGAAGATGCCTTACGGGAATATG ATGAACTAGAACTCTGCTATCTTGAAACAGTTAACATGACCGGAAAGCAAAGGAACTTTGGAGGTGCAGACCATGGGGATGATCAAGCAGCATTGCTTAA TCCAGGAAACAAAGCATTGACACAGATTGTCCAAGAGGACTCGTTTAGGGAGTTTGAATTTAGACAATATCTATTTGCCTGTACATCAAAGCTCTTATTC AAGCTGAATCGTTCCTTTGAGGTTGCATCACGGGGTTATTCTTTCATAATAAGCTTTTCAAAATCTTTGGCATCACATGAGCATAGTCTGCCTTTTTGTA TGCGTGAAGTCTGGGTGATAACTGCTTGCTTGGCTTTAATTGAAGCAACAATTTCTCATTATAATGAAGGACATGTGGTGCCTGACATAGAGAAGGAGTT CTTTCGTCTTCTGGGTGACCTGTATTCACTTGCTAGAGTTAAGTTCTTAAGAATTGCATATTTAGTTGGGTATGGAACTGATATAGAAAGAAGTCCTGTC AACAGTGCTTCTCTCAGCTTACTTCCTTGGCCTAAGCCAGCAGTTTGGCCTTCTGTTCCCGCTGATGCATCAGTAGAGGTGCTTGAGAAAGAGAAGCTGA TTCTCCAAACAACTCCTAGAACCAAGCACTTTGGTATCCATAGGAAACCCCTGCCTCTTGAACCTACTGTACTTCTACGAGAGGCCAACAGGCGGAGGGC TTCACTTTCAGCTGGAAATGTGTTTGAAATGTTTGACAGTCGTCAGGTTACATTGGATGGATCACCATCACAAAAACTACATGCAAGTTCCATGATACGT ACTTATTCTTCACCAGGAAACGTTGATAGCTCAATTGACCGACCTATGAGGCTTGCTGAGATTTATATAGCCGCTGAGCATGCTTTGAAGCAAACCATTT CTAATCCAGAACTGTTGACATCATTATCATCATCCGAGGAGTTTGAGGTATCAACATGGGCTGAAGTCAGGAGTGCATGAAATGATTCTCAAGGATCTCT TCTTGAGAGCTTCTCATCGTGTCTCTGATTGTTTGTTTTATTAATTTTTCCCTTATGAACAAATATTGAGTACTTGTAACTATTTTCTTGATATCACTTC TGGTGCTAATTGGGCTTCATCTTCATTTATCCCATACTTGTTTGTTCCATGCTGGCAGCAAAAATATTTGGAGCTAACTAAAGGTGCTGCTGACAATTAC CATCGTTCCTGGTGGAAAAGACATGGAGTTGCTCTTGATGGTGAGATAGCAGCAGTCACCTTTAAGCATGGACATTTTGATCAAGCTGCAAAATCATATG AAAAGGTTTGTGCACTTTATGCTGGTGAAGGATGGCAAGACCTGTTGGCTGAGGTCCTTCCCAATTTAGCTGAGTGTCAGAAGATACTCAATGATCAGGC TGGCTACTTACTGTCCTGTGTGAGGTTACTTTCTCTTGATGAAGGACTATTTTTGACGAAGGAGCGACAAGCTTTTCAGTCAGAAGTTCTTCGTCTTGCT CATAGTGAAATGAAGGACCCTGTACCTCTTGATGTATCATCATTAATTACGTTTTCTGGCAACCCTGGGCCTCCGATGGAGTTATGTGATAGGGATCCTG GTTCCCTTCCTGTAACTGTTTGGAGTGGTTTTCCAGATGATATTACTCTTGATTCAATCAGTCTTACATTAACACCAACACACAATGCTGACGAAGGTGT GAAGGCATTGAAGAGTTCTACAGCTATCGTTTTACATCCTGGTCGGAATACTATTACCTTGGATCTACCACCTCAGAAACCAGGGTCATATGTTCTTGGA GTTCTTACTGGGCAGATTGGGCAGTTGAGGTTTAGATCTCATAGTTTTTCAAAAGGTGGTCCTGAAGATAGTGATGATTTTATGAGTTATGAAAGGCCAG CTAAACCTATTCTGAAGGTCGCCAAACCTAGAGCCCTCGTTGATCTTGAAGCTGCTGTTTCATCTTCCTTGTTAATAAATGAATATCAATGGGTTGGCAT TTTAGTTCGACCGATTAATTATTCTCTCAAAGCTGCTGTCTTGCATATTGATCCTGGTCCGGGATTAGAGATTGAAGACTCACATGTAATTGAGATGGAA AGCTCTTCCAGTGTGTTACAGAATGATGATGAGCAGGTACAGGAGGATGGTGCTCAAATAGGATCTTCGAATTCTGGAAAAAGGTCCGAATGTTTGTCTC TTCATGATGGTAAAATAGAGTTTCCAAGTTGGGCAAGTGACACACCTTCTACACTTTGGGTTCTGATTCGTGCCGTCGGTGACTCGCTCAGCAGAGGATC ATCTTCAGCCACCACTAGAACAGAGAATATTGTAGATGGAATGAGAACAGTAGCTCTGAAACTTGAATTTGGAGTATTCCACAATCAGATATTTGAAAGG ACCCTTCCGGTGCATTTTACGTATCCTTTCTATGTTACGACCCGTGTTACTGATAAATGCAATGATGGTACCCTGCTTCTGCAGGTTATACTTCACTCTG AAGTAAAGGCTAAATTGACCATATATGATGCCTGGCTCAATCTTCAAGATGGATTTGTTCATACTGGAGAAAGTGAAGGTAGACCTAATTCTAGTGATTT CCCACTGGTCATATCTCCCACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTAGGCATGACAAATGAAGAAGGTAATCACACTGGCAGATATCAATCA AACGATGTTATTGTTGCTTTTTAATATATTAACAAATAATTTGGCAAGTGCCCTAACTTTCATAATTACTGTATGACAAGTGCCCTATAGCAATATGGAT GAAGAATTTGGGAGCTGATAAACACAATTATTTCCTAGTGCAGGAAGTGTGTTTTTGTAATTCTAACCATTGCAAGTGTTACTGATTAGTTGACTTATTG TAGTTCAAGTTTAATAAATTCTGGCCCTCCATGGTTGTCAATAAACTCTGCTAGTTAATATCTTTATTCCCATGATGTTGCGAATTACATGTTGATATTT CTGAACATGAAAGAAAAACTATTTGCTTATGTATTAACCTGTAATCTATGCTTAGAACTAACAGTGTGGTTTCCAGTTTTTATTAGTTGCACAGGCACAA TTGATAAGTGATATATATGAAACTTGCTAAATCACATTTTCTTTTTATTCATTATGTTTTTCTTTAAGTGATTTTACGTATTATGGAAGAGTGGCATTAA TCAATCACTTATGTTCTATCCACACCTTTGAAAATATAAAAGCCTGATTTCTGCAATTAATCAACTGATTGATTTGTAACCCATAAAAATGCAGAAGCCA CAAAGCAATCAGAAAGCATATTAAATATCAGATACGGAATTTCTGGCGATAGAACAATTGGAGCCCATCCCCCTCTCATGAATGAATCTACTAGAGTTGA TGGTGCCAGACAAGAATTGATTTTCAGGACCGCAATTGCTTTGCAAAGGCCTGTGCTTGATCCATGCCTAGCTGTTGGTTTTCTTTCTCTCCCTTTGGAT GCCCTAAGAGTTGGGAAACTAGTAAAGATGCAATGGCGGGTGGAAAGGTTAAAAGATTTCGATAAAAAAGAAGTCTCTGAACATAATGATGAGGTGCTAT ATGAGGTAAATGCTTATTCTGGAACTTGGATGATAGCTGGGAGGAAAAGAGGACATGTATCTCTCTCCAGAGAAGAAGGTGCAAGAATCACTATCTCAAT TTTATGCATGCCACTGGTGGCTGGTTATGTGCGGCCACCAATACTTGGGCTGCCGGATGTTGATGATGCAGATATAAGCTGCAAACCTGCCGGACCACAT CTTGTTTGTGTTTTGCCCCCAGCTCTCTGCTCATCCTACTGCATTCCAGTTGATTCACGAGCTTAGCAATGTCATTCCAGTCAAGTTTGATCCAGTTTTA TTGTTCTATCACCAGTCTGAAAATTTTACTTAGGTCCAGTCATATATAGAAGTGAACCATTTTTTCCGCCGGTTACGTTGTGTGAAAATCTTCATAGTTG GATTTGTGTTGCTTATGGCTCCAGAGTGCATTCAAATCTTGGAAACAACTTCTTCATTCAAGGATAAGGCTGTGTTCATCTATTCTTCTCAAACCCGACT AAGTGATAGGCCTTGTGCATTATCCGTCCTTTATGGCCTTTAGGCTGCATTCAGAGTATCTCAACAGCAACCCTGGTGCATGTACATTGGAAATTTGTGC TCTTCCTTGTACCATAGATTAGAATATACGTGGAGGATAACATTCTTTTGTCTCTCATATATGGAATTAATTTTTTTTTGATAGAAACCAAAATATTGAA AAATTATCTATTTTACTTCCTGCTTTAAGAGCAGAATTGCCAATTCATAATAAATTTAATTTATTTATGTTTGCCACGCCAAAGCATTTAACCTTTCC BLAST |
Tissue | pods |
Gene name | LI_gene_191605; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_485974
Blastp | Trafficking protein particle complex II-specific subunit 130 homolog from Arabidopsis with 76.64% of identity |
---|---|
Blastx | Trafficking protein particle complex II-specific subunit 130 homolog from Arabidopsis with 77.41% of identity |
Eggnog | trafficking protein particle complex(ENOG410XNVF) |
Kegg | Link to kegg annotations (AT5G54440) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443977.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |