Id Trinity | TRINITY_DN52304_c1_g1_i33 |
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Name Transcript | Ll_transcript_487204 |
Sequence | ATTAACTAATCTAACTAACTCGGCCAACTCAGCATCTAGCGCTAAGCTGGACATACTGTAACACATCATATGCTCTTGTTACTAAAAGGTTGTAGTTAGC GTTTTAATGTGTTTTATTTAAACTTAAATGTTTTCCCAGCATGCTAAGAAATCAGTACTCTAAAGGTTGTAGAGGATGGATGGATCTGATCTTTTCCTAT CCTTGACTGCATCGTTGTGCTGTAGACATCATTGATAACTGCTACCTGTTGTTGGCGTAAATTTGGAATACTGGAATCAACATCTAAATAAATGCCTAAA ATATGTCTAGAGAAATGCTGCATACAACATCATGTCATGTCAGTATCATCCTTAATGCAGGTATATCCTTTTGGTAGTGCAACTGATTCTATGCATTCAG ATCCTTCTGAGAAAGAAGATGCACAAAGTTCTCTTAACTATTCTTTTAAGCAAGGGTATGCCCTATGCATTGTTGTATTACTTTCATTTTCCATCCTTGC CATTGCTCAATAAGCATAATTCCTTTTTATTACGCAAGCTATTGTTACTATTATTATTCTGTTATTTTTGTCATTTGTTAATTTTTCATTGTCATTTCTC TGTCACTCTCTTGGGCAAGAAGAATTCATCCACCACCTACTTTTGGTTCATCCTCTAACCTGGAAGCTCTTGCACTTCAAACAACTAAAAATAACATTGA AGATGGGGACAGTGCCATGGGCATGACACCATATTTTCCCCGGCCCATGCATGAGATTACCTTTTCAACAATTGACAAGCCCAAACTCCTTAGTCAGTTA ACTTCAATACTCGGTGAGATGGGACTGAACATTCAAGAAGCTCATGCATTTTCCACCACCGATGGGTTTTCTCTGGATGTCTTTGTCGTCGAGGGATGGC CAAATGAGGAAACTGAGGAGCTTAAAAGTGTGTTGGAAAGGGAAATTTTGAAGGTTAAGGAACAATATCTGTCAAAACAGGGCATACTTCTTGCTGCCAA TGAACAATACCAAGCAAGGATGGAATCCTCCCCTCACTGCATACAAATACCTTCCGATGGAGCGGATGTTTGGGAGATTGATACTAACCAGCTGATCTAT GGAAACAGAGTTGGCTCTGGGTCATTCGGTGACTTGTACAGAGGTACATATTGCAGTCAAGAAGTGGCTATCAAAGTTCTTAAGCCTGACCGCATAAGTA CAGATATGCTGAAAGAGTTTGCACAGGAAGTCTATATCATGAGGAAGATTCGACACAAGAATGTTGTCCAGTTCATTGGTGCATGTACCCGGCCACCAAA TCTTTGTATTGTTACAGGTAAATAGGAGAGAACCCTGAGAATTTACTAAGTCATTTATTCATAGTTTCATATGTTACTTTAGAGGGTGAGCTTTGGTGTC ACAATAAGGTTGCTTTCTTGTGACTTGGTGGTCACAGGTTGCAGAAAAATCCTCTCCACTTATTGTGGCGGTTGTGTACATTTGACCCTCTCCGAATCCC TCAATGGTGGAAAGCCTTGTGCACAAGCCTTCTCGCTTTATATTCATATCCTTAGTCTATTCTTTAAGTTTCACTAGTTTTGGCATGTGTATAAAGTCTA AAATAACCTGTTTATGCTGTATCCAGTAATTTAATTTCTAAGATGATTT BLAST |
Tissue | pods |
Gene name | LI_gene_191624; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_487204
Blastp | Serine/threonine-protein kinase STY8 from Arabidopsis with 69.27% of identity |
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Blastx | Serine/threonine-protein kinase STY17 from Arabidopsis with 63.98% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT2G17700) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423886.1) |
Pfam | ACT domain (PF01842.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |