Ll_transcript_487564

Id TrinityTRINITY_DN52318_c1_g1_i8
Name TranscriptLl_transcript_487564
SequenceAGGCTGAGAGTGAAGGTGAAGCTGAAGGAATGGCTGATGCCCATGATGTTGAAGGTGATGGAGCCTCATTGCCGTTTTCAGAACGCTTTCTGCTAACTGC AAAGCCTCTGGCAAAGCATGTTCCCATGCTATTACATGATAAAGAAAGGAATTCACAAGTTTTTTATGGAAACGATTCCTTCTATGTGCTGTTTAGACTT CATCAGGTACAAAAATATCTATTTACATTTTACAGGAAAAACCCCCACCCGCGGTCAAGATTTTCAATTCGAACATTGAAGCTCCATATATTTTCAAATT GCATGAACTCCATGCTCTGGTTCTATTTTCATTTAGAATATTCCCAATTTTTATTCCATTGTTAAAAAAACTTCAGATTGATACGTAAAAAGTACTAAGT CTAAATTACCCTTCTCACTTGGTTTTTACTTTTGTGATTTTTTAAGAAGTTCCTGGTACTACTCTGTGATTGGGTATCTGTTACCAGTAAAGTCATCTCA AAATGTTTGAGTCTGACCAGATGATTCTTTTGTTGAGTCCTCCTCTTTGGTAGAAGCACTTTATTTGGGGGAAAGTTCAAATTTCTAGCAATTGTAATCG AAGAGAAGAATATTTAATGATATGTAATTTTGTTGAGCTCTTCTAGTGACGAAATATTGTCCATGAAATGAAATGGATTAGGGTGTACCATAGGGTGTTG CTGGTCCCAAACTGAAATGGCGCTTAGTCCAGCTGCGAGTGTAGACCCACTTCCTCATATAATATTTTTGTTTCAGCAAGTGTGATGTTGCTGGCGTAGA CACAACCAATGGATGAAATTTGGTATCAACCTCATTTTGGTGTATCTAATTGACTAAGTAAAAGGATCCAATGATGTCTGAACCGAATGTAGATAATACT GATTTTGGACATTGTTTTTCTTGACTAAAATCTGGTTACCTCAGGGATTATGTGAGTCTGGGTAAAATGGTGGTGTCTAAAGAGATAATGAAGGACCTAG GACAACATGTATTCTTGGGAGAGGAGAACAATGGGTGGTACCTGGATGGTCATTGGATGAAGTCATGATGATGATGGATGGTGGTTAGAGGCCAGGAAAA TGGGAATTCTTGCTGTTATCAGGACCAACTTTGTGGGGATAGTAGTGGAGGTAAAATTAGAGTTGGGTTCCGGATGGTTCACAGCAAGGGATTAAGGACA GCCAATTCAGTGGTCGCCTAAGGAAAGGGTAGAAAGGATATCATTGACGAGAAGCTGCCACCATTTTGGTAATAGAATAATGCTGTTAACCATGTCCAGG GTTACTGTTAACCATATCATTGACGAGAAGCTGCCACCATTTTAAGGGAGCGAGGGACCTTTTATGTAGATTTTGAATAGCTGGAGGAGTGTCAATGTTT TGGGTGTGCATGAATTTATATGTGTGTATGGTTTAGGCTATACATTTCAAAGCTTATTATTTCAATGTATAATAATTTCTTTTGCTAATCTGACAGACAT TGTATGAGAGGATTCGATCAGCAAAGATTAACTCATCATCTGCTGAAAGGAAATGGAGGGCTTCAAATGATACAAGCTCCACAGATCAATATGACAGGTT CATGAATGCCCTTTACAGTTTACTGGATGGTTCTTCAAATGATACAAGCTCCACAGATCAATATGACAGGTTCATGAATGCCCTTTACAGTTTACTGGAT GGTTCTTCAGATAATACAAAATTTGAGGATGATTGCCGAGCGATTATAGGAACTCAATCATATCTCCTATTCACATTAGACAAGCTGATATATAAACTTG TTAAACAGCTCCAAGCTGTTGCCTCTGATGAGATGGATAGTAAGCTCCTCCAATTATATGCATATGAGAAATCAAGAAAACCTGGAAGATTTGTTGACAT TGTTTATCATGAAAATGCCCGTGTTCTTCTTCATGATGAGAACATATATCGTATTGAATATTCACCTGGACCAATGCAATTGTCCATTCAACTGATGGAC CATGGACTTGATAATCCTGAAATGGCTGCTGTGTTGGTGGACCCTAGTTTTTCATCCTATCTGCACAATGATTTCCTCTCTGTTGTCCCTGAGAAAAAGA AATCAAGAATTTTTTTGAGGAGGAATAAACGTAGATATGCTGGCAGTGATGAATTTGCAAGTCAAGCTATGGAAGGACTACAAGTTATTAATGGTCTCGA GTGTAAGATAGCTTGCAATTCTTCCAAGGTATTTTATTTAGTAAGATTTTCTTCCGAATGTGTTGTCTATGTTCTTTCTTCCATCAATCCTTACTATAGC TATGATCTTGCACATGTTGTTAATACCTTACATTTAGAGAGTGGGCCTCCGACAATGGTAAGTTGCTTGTCTTGTGACTTGGAGGTCATGAATTTAATTC ATGAAAATAGTCTTTTTACTTGCGAGCGTAAGACTGTATAGAACTACCCTCCCCAAACTCCACTAGGTGAAAGCCTTGTATATTAAGCCGTCCTTTTTTT CTTGCTAATACTTTGCATTTAATTAGAGTATGACCATATGCTATGATGTCTGTTGATTATTTCTCAGTTGCCACTCTTACATTTTTTTCTTGATACCTAT TGCACATTGTGTTAGGTGTCATATGTTTTAGATACCGAAGATTATTTGTATCGCATGAAAAAGAAAAGAAGAGCCTCGCATCCGAAGAGTTCATGCCATG ACCAGACAAAGTCTTCAAACATTTGTGCAAGAAGACAACAACAGTTCCACAAACTGTTTTCCATTACATGATGGTGTCGGTTTCGAGCTGGTGGATATGA GACACTGGATGAAAACAAGATGCTTCCAAGGGATGTTTTTCTGAAATTAATTTTTCACATTTTCCATTATTCCATACCAGCAGCTACCTAATAAAACTCT CACAGAAGAGGAAGCACTGAGAGGAGGTTGTTGTATACTGTACTTTGATGCCTGATATCACTTACAATATTGTAAATAGAGGATATTTTTTGAAAGCCAA TGGACGTTTTCTACATTCCGTTCATCCATATTTTTGTTGTACTTTTATTTTTCTTTCCTTTTATATTTTAGCTGTTACAGCTTTGTTGACCTTATTGAAT TATCAATATTTGATGGCTGCGATTGACCTCCAGTGTATACTGAAAAGTTGTTTTAGTTTCACATGGCAATTTAT BLAST
Tissuepods
Gene nameLI_gene_191727; 
Additional informationdetails; 

Expression of Ll_transcript_487564

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_487564
BlastpPaired amphipathic helix protein Sin3-like 5 from Arabidopsis with 62.74% of identity
BlastxPaired amphipathic helix protein Sin3-like 5 from Arabidopsis with 58.2% of identity
EggnogPaired AMPhipathic helix protein(COG5602)
KeggLink to kegg annotations (AT1G59890)
CantataDBLink to cantataDB annotations (CNT0002810)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019423160.1)
PfamC-terminal domain of Sin3a protein (PF16879.4)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;