Ll_transcript_486761

Id TrinityTRINITY_DN52321_c2_g1_i15
Name TranscriptLl_transcript_486761
SequenceTAACCCTTTGTGGGGCGTGATTCTAGACCAGTATTATCGTAATATAAAAGAAAAAGGCAAGGGTTAGAGACAGATGATGAAGAAAAGCTATAACCTTTTC TCCTGCTCCTGAACTCCGCGTTTTTCTCGTGAACCGGCGCCGTTTTAATTTTCTCTTCACTCTTTCACTCTTCTTCGCTACTTCACTATCCTTAAACTCT CTCGCTCCTCTTTCTCTCTCTATCTCCCTCGTTTTTCGCGCTCACACGGCGTCGCTTTGAAGCTTACCTCGTAGTTACTCTGAACTTCGTTTTCCGATCA TTCTTCGTTCTCCGAAGCGCATTCACTCGCTTCATCCAAGCTGCTTGAATATTTCTGCCTAGTGCAAGGTTACCAAGTTCCATGGAGAATGACCTCTTTC AAGAGCAGAAATTGCCACAAGGTCTCATAAAAGCAATCAAGTTTGATGTCTTAATTGAGGCAGATATAGAAAAAATGGTTGCTTTGGAGATAAATGCAGC CGGGCAGGTCAACTGTTCTGACCTGGGACTCCCAAATCTATCTTCCGAGTGCACAACATGTGGCGGTAAATCTTCGGATAAAAATTCTTGTGAAGGTCAT TATGGAGTAATTAAATTTCCTTTTGTCATACTCCATCCATATTTTATGTCAGAGATTGCAAAAATCTTGAACAAAATTTGCCCTGGATGTAAATCTATTC GACGAGAATTACAGAACAAGGCTGCTCAATTACTCTCTGGATTCAAGCAGTTTAACGGTTGCAAATATTGTTCTGGAAATTCTATGGTTCGCTATCCAAC AATGAAATTTAGAGTTTCCTCAAATGACCTCTATAGAAGAACTGCAATTATAGCTGAGGTTAATGATAAGGCTCCAAAGAAGAAGTCTTTGGGTCTAGGA TTGCCTGATGATTATTGGGATATTATTCCTGTAGATGCTCAACAAGAAGAAAGTTGTATAAAATCAAATAGAAGGGTTTTATCACCTGCCCAGGTTTGCT CTTTGTTGACTGATGTTGATCTAAACTTTATTGAAAAATTTGTTCCGCGAAAGGATTTGCTTTGTCTCAAGTACTTCCCAGTGACACCAAATTGCCATCG TGTGACAGAGTTTGCACATGCATTTTGTAATGGAAGCCGGTTGAGTTTTGATGACAGGACCAGAAATTGCAAGAAGTTGGTTGATTTTAGGGGTACAGCT AATGAGTTAAGTTCTCGTGTTTTGGATTGCATGAGGATCTCTAAGCTAAATCCTGACAAAACACCAAGTAATAATATTTTTGCCGAGATTCAGAAAAGAA GAGTTGGTGAAAATGCTTGCAATTCATCTGGTTTGAGATGGATGAAAGATGTGGTTCTTGGAAAACGCAATAGTAGTTCATTCCGTACCGTGGTTGTCGG TGATCCAGACCTTGAGCTTAGTGAGGTTGGATTACCTTGTCAGATTGCAGAAAGTTTGGAGGTTTGTGAACATGTGAACAGGCAGAATAGGGAAAAATTG TTTGATTGTTGTGAGTTACGCATGTTAGAGAAGGGACATATAAAGGTCTGCAGAAAGGGTAATCCAATTAAATTGTTTAAGAAGGAAGACCTTAAGATAG GAGACATATTTTATAGGCCCCTTACTAACGGGGATATAGTGCTGATAAATAGGCCTCCTTCCATACATCAACATTCTATGATTGCCCTCTCAGTTAAGGT CCTTCCGATATCTAATGTGGTATCTATTAACCCAATCTGCTGTTCCCCACTGAGTGGGGATTTTGATGGTGATTGCCTTCATGGGTATATTCCACAGTCA GTTGGTTCCAGAGTTGAGCTTAGTGAGCTGGTTGCTTTAGATAGGCAATTGATTAATGGGCAAAGTGGTGGAAATTTGCTTTCACTTTCTCAGGATAGTT TAACTGCTGCTTATTTGCTGATGGAAGATGGGGCTCTTTTGAATGTTTACGAAATGCAGCAACTTCAAATGTTTTGCCCTTACAAGTTAACACTTCCTGC CATTGTAAAAGCTTCTTCGAATAATTCCTCATTTTGGACTGGCAAGCAATTGTTTAGCATGCTCTTGCCTTCAAAATTTGACTACTCTTTTCCTCCGGAT GATGTTTTTGTTAAAGATGGGGAGCTTATATCTTCCTCCGAAGCTTCTGGCTGGCTACGTGATTCGGACTGCAATGTTTTCCAGAGTCTTTTGCACCATT TTAAAGGGAAAACTCTGGACTTTTTATATGCTGCACAGAAAGCTCTTTGTGAGTGGTTGTCTATGACAGGTTTTAGTGTTTCCCTGTCAGATTTGTACCT CTCTTCTGATTCCTATTCGCGGAAAAATATGATGGAGGAAATCTCATATGGTTTACAAGCAGCAGAGGAGGCATGCAACTTCAAACAGTTACTAGTGGAT GATTATTGTGATTTTCTGTCAGGAAATGTTCAAGATATTACTGTTAAAGTGGATCGTCTTAATCATGAAAGGCAAATATCTGCTTCGCTGAGTCAAGTGT CTGTTGATGCTTTTAGACAGGTTTTTCGAAGTATTCAAAGTTTAGCTGACAAATATGCATGCAAGAGCAATACTTTCCTTGCTATGTTTAAGGCTGGAAG CAAGGGTAATTTACAGAAGCTAGTGCAACATTCCATGTGTCTTGGCTTGCAGCATTCTCTGGTTCGTTTGTCATACAGAATTCCCCGCCAACTTTCTTGT GCTGCTTGGAATAGGCAGAAGAGGCTTGATTCAATCAAGAAGTTTTTAGGAACTCCTCAATCTGTCCAGTCTTACATTCCGTATGCTGTGGTTGAAAACT CTTTTATGACTGGGCTAAATCCACTTGAATGTTTTGTTCATTCAGTGACAAACCGTGATAGCTCTTTCAGTGACAATGCAGATCTTCCTGGAACGCTGAC ACGCAGACTTATGTTTTTTATGCGTGATTTGTATGATGCATATGATGGAACAGTGAGAAACTTATACGGTAATCAAGTTATTCAATTTGCTTATGATACC GACAAGGACTCATCTTCTGATAGATGTTACCAAGAATATACCATGGATGGTGAACCAGTTGGAGCCCTTTCTGCTTGTGCAATTTCTGAGGCTGCATACA GTGTTTTGGGTCAGCCAATCAGTCTGCTAGAAGCATCACCTCTGTTAAATTTAAAAAATGTTTTAGAATGTGGTTCAAAGAAAAGAGGCGGTGATCAGAC TGTGTCATTATTCTTGTCCAAGAAACTTGCTAAACATAGATATGGGTTTGAGTATGCAGCCTTGGAAATTAAGAATTATTTGGAAAGGATGATGTTCTCA GACATTGTTTCTACGGTAATGATAATATTCACCCCACAGTCTTGCAGCCAAGAAAAGTATAGTCCTTGGGTTTGCCATTTCCATCTAGACAGGGAAATTG TAAAGAGAAGAAAATTAAAAATGCATTCTATCATTGACTCTCTTTACCAGAGGTGTGACTCACTAAGAAAAGAGTCAAAAGTCACTTTTCCCAATTTGAT TATATCAAGCAAGAAGTGTTCTGCAAATAAAAGGAAGGAGGGAGAAGATTGTGTCACTGTTACAATTGTTGAAAACTCTGGGGATTCTTTACAAGTCGAT GCTGTTCGGGAGTTGATGTTACCTTTGCTTCTTGGAGCAGCTATAAAAGGATTTCTGGAGATCACAAAGGTTGATATTCTCTGGAGTAATCTGTCGGAAG TATCAAATTCTAGTAACGGTTCTTTAGGTGGTGAACTGTACTTGAAAGTTACTATCTCCAGTGGTGGTGGCAGTGGTAGATTCTGGGGATTTCTCATAAA CTGTTGTCACAAGATAATGCATATGGTTGACTGGACACGAAGTCATCCCGATAACATTCATCATTTCTGCTCAGCCTATGGAATAAATGCAGGCTGGCAA TATTTTCTCCGCAGTTTGGCATCTGCTACATCTGCTACTGGAAAGACAATCCTTCCTAAGCATCTGCGTCTTGTTGCCAATAGTCTGTCAGCTACTGGGG AGTTTGTAGGATTAAATGCTAAAGGCATGAAAAGGCAAAGACAACATGCATCTGTCGCGTCACCCTTTGTGCAAGCATGCTTTTCTAATCCAGGTAGTTG TTTTATAAATGCTGCTAAGTCCGGAGTCAAGGACAACCTCCGAGGCAGCATAGATGCATTGGCTTGGGGGAATTGTCCGTCCATAGGGACAAGTGGACAA TTTGATATCTTTTATGCAGATAAGGGACAAGAGATTGCTAAATCTGTAGATGTGTATAACCTACTTGAAGCAAGTATTGACCAACTGAATGAAAAGATTG ATACCCCTGATGCTCACAACTATTCATTTGACAAATGCGGCTCTGGGTATAGATACAAAAATGGTGATTCTACCTTGAAACAGTTTAAGCAAGTGAAAAG CAATATAAGAAATTTTGTGACTGTAAAGGATATTCAGAAACTGACTTATGCATCAAGGTCCATATTGAACAATTATTTGATTGATCAGCAACTAAGTGAC AGGGACTTGTCAACTATGCTGAGGGTTTTGCATTTTCACCCGCATAAAGATGAGAAGTTTGGTGCCGGACCACAGGGCATAAAGGTTGGGCATCATCCTA TATATAAGGATACCCGCTGTTTCTTCATAGAACGAACTGATGGGAC BLAST
Tissuepods
Gene nameLI_gene_191748; 
Additional informationdetails; 

Expression of Ll_transcript_486761

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_486761
BlastpDNA-directed RNA polymerase IV subunit 1 from Arabidopsis with 50.1% of identity
BlastxDNA-directed RNA polymerase IV subunit 1 from Arabidopsis with 50.28% of identity
EggnogDNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
KeggLink to kegg annotations (AT1G63020)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019445105.1)
PfamRNA polymerase Rpb1, domain 1 (PF04997.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;