Ll_transcript_486752

Id TrinityTRINITY_DN52321_c2_g1_i7
Name TranscriptLl_transcript_486752
SequenceCAACAATTTAGTAACCGATAAAGTTTGGCCCTGGGGAGAAAAGAGAAATTCTGGGTGGGTCCTTGCATAGGGGTAGCATCGTAATAAAACCCAAAGCAAG GGCTATTACCTTTTTATCTTCTTGGCCTTGTTCTTCATCAGTCTCTCTCACTTCTGAACTCTCAGCGTTTGTCTCGTGAACACTGGTTATTTTGGTAGAC CAAACCGGCGCCGTTTTAATCTTCTCTTCAATCTTTCATTCTCTCTTCGCTTCTGAACTCAGCGTTTCTATCCCTCATACGGCATCGTTTCGAAGCTCAC CTCATCAGTAGTGTTTCTAACCTGCGCTTTCCGATCACTGCTCCGTTATCGTAAGCGCATTTAGTCGCTTCTCATAAGCTGCTGAAATTTTCTGCCTAGC GCAAGGTTACTGAGTTCCATGGAGGATGACCTCTTTCAAGAACAGAAATTGCCACAAGGTCTCATAAAAGCAATAAAGTTGGATGTCTTAAATGAGGCGG ATATAGATAAAATCGCTGCTTTGGAGATAAATGCAGCCGGGCAGGTCAACTGTTCTGACCTGGGACTCCCAAATCTATCTTCCGAGTGCACAACATGTGG CGGTAAATCTTCGGATAAAAATTCTTGTGAAGGTCATTATGGAGTAATTAAATTTCCTTTTGTCATACTCCATCCATATTTTATGTCAGAGATTGCAAAA ATCTTGAACAAAATTTGCCCTGGATGTAAATCTATTCGACGAGAATTACAGAACAAGGCTGCTCAATTACTCTCTGGATTCAAGCAGTTTAACGGTTGCA AATATTGTTCTGGAAATTCTATGGTTCGCTATCCAACAATGAAATTTAGAGTTTCCTCAAATGACCTCTATAGAAGAACTGCAATTATAGCTGAGGTTAA TGATAAGGCTCCAAAGAAGAAGTCTTTGGGTCTAGGATTGCCTGATGATTATTGGGATATTATTCCTGTAGATGCTCAACAAGAAGAAAGTTGTATAAAA TCAAATAGAAGGGTTTTATCACCTGCCCAGGTTTGCTCTTTGTTGACTGATGTTGATCTAAACTTTATTGAAAAATTTGTTCCGCGAAAGGATTTGCTTT GTCTCAAGTACTTCCCAGTGACACCAAATTGCCATCGTGTGACAGAGTTTGCACATGCATTTTGTAATGGAAGCCGGTTGAGTTTTGATGACAGGACCAG AAATTGCAAGAAGTTGGTTGATTTTAGGGGTACAGCTAATGAGTTAAGTTCTCGTGTTTTGGATTGCATGAGGATCTCTAAGCTAAATCCTGACAAAACA CCAAGTAATAATATTTTTGCCGAGATTCAGAAAAGAAGAGTTGGTGAAAATGCTTGCAATTCATCTGGTTTGAGATGGATGAAAGATGTGGTTCTTGGAA AACGCAATAGTAGTTCATTCCGTACCGTGGTTGTCGGTGATCCAGACCTTGAGCTTAGTGAGGTTGGATTACCTTGTCAGATTGCAGAAAGTTTGGAGGT TTGTGAACATGTGAACAGGCAGAATAGGGAAAAATTGTTTGATTGTTGTGAGTTACGCATGTTAGAGAAGGGACATATAAAGGTCTGCAGAAAGGGTAAT CCAATTAAATTGTTTAAGAAGGAAGACCTTAAGATAGGAGACATATTTTATAGGCCCCTTACTAACGGGGATATAGTGCTGATAAATAGGCCTCCTTCCA TACATCAACATTCTATGATTGCCCTCTCAGTTAAGGTCCTTCCGATATCTAATGTGGTATCTATTAACCCAATCTGCTGTTCCCCACTGAGTGGGGATTT TGATGGTGATTGCCTTCATGGGTATATTCCACAGTCAGTTGGTTCCAGAGTTGAGCTTAGTGAGCTGGTTGCTTTAGATAGGCAATTGATTAATGGGCAA AGTGGTGGAAATTTGCTTTCACTTTCTCAGGATAGTTTAACTGCTGCTTATTTGCTGATGGAAGATGGGGCTCTTTTGAATGTTTACGAAATGCAGCAAC TTCAAATGTTTTGCCCTTACAAGTTAACACTTCCTGCCATTGTAAAAGCTTCTTCGAATAATTCCTCATTTTGGACTGGCAAGCAATTGTTTAGCATGCT CTTGCCTTCAAAATTTGACTACTCTTTTCCTCCGGATGATGTTTTTGTTAAAGATGGGGAGCTTATATCTTCCTCCGAAGCTTCTGGCTGGCTACGTGAT TCGGACTGCAATGTTTTCCAGAGTCTTTTGCACCATTTTAAAGGGAAAACTCTGGACTTTTTATATGCTGCACAGAAAGCTCTTTGTGAGTGGTTGTCTA TGACAGGTTTTAGTGTTTCCCTGTCAGATTTGTACCTCTCTTCTGATTCCTATTCGCGGAAAAATATGATGGAGGAAATCTCATATGGTTTACAAGCAGC AGAGGAGGCATGCAACTTCAAACAGTTACTAGTGGATGATTATTGTGATTTTCTGTCAGGAAATGTTCAAGATATTACTGTTAAAGTGGATCGTCTTAAT CATGAAAGGCAAATATCTGCTTCGCTGAGTCAAGTGTCTGTTGATGCTTTTAGACAGGTTTTTCGAAGTATTCAAAGTTTAGCTGACAAATATGCATGCA AGAGCAATACTTTCCTTGCTATGTTTAAGGCTGGAAGCAAGGGTAATTTACAGAAGCTAGTGCAACATTCCATGTGTCTTGGCTTGCAGCATTCTCTGGT TCGTTTGTCATACAGAATTCCCCGCCAACTTTCTTGTGCTGCTTGGAATAGGCAGAAGAGGCTTGATTCAATCAAGAAGTTTTTAGGAACTCCTCAATCT GTCCAGTCTTACATTCCGTATGCTGTGGTTGAAAACTCTTTTATGACTGGGCTAAATCCACTTGAATGTTTTGTTCATTCAGTGACAAACCGTGATAGCT CTTTCAGTGACAATGCAGATCTTCCTGGAACGCTGACACGCAGACTTATGTTTTTTATGCGTGATTTGTATGATGCATATGATGGAACAGTGAGAAATTT ATACGGTAGTCAAGTTATTCAATTTGCTTATGATGCTGATAAGGACTCATCTCCCGATAGCTGTTATCAAGAGTATACCACGGGTGGGGAACCAGTTGGA GCACTTTCTGCTTGTGCGATTTCTGAGGCTGCATATAGTGCTTTGGGTCAGCCAATCAGTCTACTTGAAGCATCACCTCTGCTAAATTTAAAAAGGGTTC TAGAATGTGGTTCAAAGAAAAAAGGTGGTGATCAGACTGTTTCAGTATTCTTGTCCAAGAAACTTGGTAAACAGAGAAATGGGTTTGAGTATGCAGCCTT GGAAATTAAGAATTATTTGGAAAGGATGATGTTCTCAGACATTGTTTCTACCGTAATGATAATATTCAGCCAGCATTCTTGCAGCCAAGAAAAGTATAGT CCTTGGGTTTGCCATTTCCATCTAGACAAGGAAATTGTAAAGAAAAGAAAATTTACAATGCATTCTATCATTGATTCTCTTTACCAGAGATGTGACACAC TAAGAAAAGAGTCAAAAGTCAATTTTCCTAATTTGGTAATATCAAGCAAGAAGTGTTCTGCAAATAATGGAAAGGAGGGAGAGGATTGTGTTACTGTTAC GATTGTTGAAAACTCTGAGGATTCAATACAAGTCGATGCTGTTCGGGACTTGATGTTACCCTTGCTTCTTGGAACAGCTATAAAAGGATTTCTGGAGATC AAGAAGGTTGATATTCTCTGGAGTAATCCGTCGAAAGTATCAAATTCTAGTAACCGTTCTTTTGGTGGCGAATTGTACTTGAAAGTTACTATGTCTAGTG ATGGCAGCCGTGGTAGATTCTGGGGTGTACTCATAAACCATTGTCACAAGATAATGCATATGATTGACTGGACACGAAGTCATCCTGATAACATTCATCA TTTCTGCTCAGCCTATGGAATAAATGCAGGCTGGCAATATTTTCTCCATAGTTTAGCATCTGCTACATCTGATACCGGCAAGGCAATCCTTCCGAAGCAT TTGCGACTTGTTGCCAATAGTCTGTCAGCTAGTGGAGAATTTGTAGGACTAAATGCTAAAGGCATGACACGGCAAAGACAACATGCATCTGTTGCGTCAC CCTTTGTGCAAGCATGCTTTTCTAATCCAGGTAGTTCTTTTATAAAAGCTGCTAAGTGTGGAGTCAAGGACAACCTCCGGGGCAGCATAGATGCATTGGC TTGGGGAAACTGTCCGTCCATAGGGACAAGTGGACAATTTGATATCTTATATGCAGATAAGGGACAAGAGCTTGCTAAATCTGTGGATGTGTATAACCTT CTTGAGGCCAGTTTTGACCAGCTGAATGAAAAGATTGATACACCTGATGCTCGCAGCTATTCATCTGACAAATATGGTTCTGGGTATAGATATAAAAATG ATGGTTATACCATAAAACAGTTTAAGCAGGCAAAAAGCAGTATAAGAAATTTTGTGACTGTGAAGGATATTCAGAAGCTGACTTATGCATCAAGTTCCAT ACTGAACAATTATTTGATTGATCAGCAACTAAGTGACAGGGACCTGTCAACGATGCTTCGGGTTTTGCATTTTCATCCACATAAAGATAAGAAGTTTGGC ACTGGACCACAGTGCATAAAGGTCGGACAGCATCCTATATATACGGATACCCGCTGCTTTTTCATAGAACGAACTGATGGGACTGTTGAAGATTTTTCGT ACCGCAAGTGCATTCTGGGTGCTCTTGAGATTATTGACCCTGAAAAAGCTAAGAGCCAGAAGAAAAGATGGTCAGGAGATAATGTTGAAAATGAAAAGAG CCAGAAGAAAATATGGTCTGAAGATAATGTTGAAAAGGCAAAGAGCCAGAAGAAAAGATGGTGGGAAAATAATGTGTAAGCTGTCTCTATTCATGTCCAA ACATAATAAGTGACTGGCATTTAATCTGGTGACAGCCACAGACTTGTAAAATATGAGGGGATGTTTTGTCTGAAGAAATCCTTCTAATGCGCAGTTAGAA GGGTAATAATGGTGCCATAACTCTTACAAATCACAAAAAAACAACATTGTTTTTCCACTTTTGATTTTAAAGAGTCAACTGTAGGGGAAGCATAGTTGTT TTTTGTGGGTTTAGAGTTATGTCATTGGCATTACTCCAGCTGAAAGGTGAATAATCTGGAGCCTTCTTTGTTGTATACTATCTCAAAGCTAGATTGGGTA GTAACTTTAATCAAATGTAGCTTGATGAATTTGTTCGTCCGGTAGAGGCAGTGCTGCGAATCAAGATGAAATTGATAATTATTGTGGCAGCACGGTTTGA AACTAAGAAGATAACGGCCAGAAGGGAGCATACAAGTTGAAAGGCAAGTGGTAGCACATTTATGTAATATGTAACACTAACTTGTTCCTTGTTATGATGA AGAAAGAATGGGGTCTTTACCTATAGCTTCCTTTTGCTACTTCCACTATTAGTTTACTTGCCTCCGATGACGCCCGGCAGAGAAATATGTAGTGGAAGCA GCAACGAGAAGCTTTTAAAGGATTACCATAGACCAGATGTATTATTGGGTGTGTGGCATTTATATGTATATTTGTTTAGACTATGTTCAAATCCTATGGT GTCTCCTCTGTTCTCCCCTCATGCACACAAATTGAATGCTAATACCATTTCTTGGTGTATATTTCACCCTTAACGTCCGTGGAAGAGATTTGTTTATTTT TGTGTGTAGTCAACTCCATTTGATGGGATTCAAGTTTTTTGTACCAAATGTTCCATAATTGAATGTAAAGATTAATCTCTTGGGTCTACTGAAGTTTTTT TATGGCACAAGGCAGTGATTGGTATTTTATTACATGTTATTTAGTTTGATAGAAAGCAACCAGTTAGTTTCTTTGACTAGATTATTTCTTTCCTTTCGCG TTTCGTGAAGTTTCAATGTAG BLAST
Tissuepods
Gene nameLI_gene_191748; 
Additional informationdetails; 

Expression of Ll_transcript_486752

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_486752
BlastpDNA-directed RNA polymerase IV subunit 1 from Arabidopsis with 49.83% of identity
BlastxDNA-directed RNA polymerase IV subunit 1 from Arabidopsis with 49.83% of identity
EggnogDNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
KeggLink to kegg annotations (AT1G63020)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421599.1)
PfamRNA polymerase Rpb1, domain 1 (PF04997.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;