Ll_transcript_487050

• Id Trinity: TRINITY_DN52322_c0_g1_i17
• Name Transcript: Ll_transcript_487050
• Sequence: GAAAAAGTTTATGCTTATTCTTGATATTCTGGTTCCATGCAAGGGTATTTTATGTGAACAAAAATATACAGCAATGCAAAATTACAAGCACACTCAGAGT TAAAGACTTAGCGTGTAGAAGTTGTCTAGTGCAATGGACGGATAGGGATGTGAACACAACTACAAAGTAAAGGAAAGTTGAGAAAAGCAGTGATTTCTGT TCAGTGGAACTTCAACTTTTTCTGCCATATATTATATACTATATCATCAAATATTTCTTTTTATATCAATTAGCATTGTGTTATATTAATATTTATGTCT CTCTAGTATTTTTTTATTTTTGAGTGGATAGTTGGAAAAGAGAAAATGGCCAATACAAGAAAACATTGTTGCTATCATATTCTTATCATGTCTTTTGCAA AATTCTCCTATCTCTCATTGTTCATGAACTCATTCTTTTAACTTCTATGTCTTTTCTAGCTTCATTTCTATCCACTCCATTAATTTTACTTCTATCTCAG TCTTTTAAAGTGTACTTCTTGTTCTACTTTGTAAAAATCTATGCTTTAAACCTTAAACATTAACACTATCTTGCTGCTTCTCTATATTGTCTGATCTTAC AAATTTGAACATCATTGCAAGCTGGGTTTCTTCATTGTGTAATGGTAACTTCAGATTTGTTAACTAAAAAAGGAATCTTTGCAGGATTTGGGAGGTGGTT GGTGTTTTTGTTCTTCATTTCTTGAATTCTAGTCTCTTGCAAGTTACAACCATTTCAGAACTTTTATTCAACAATAGGATTTTAGTGTTTGTCTGGAGAT TCTGTGGATTTGACAGTGATTCACAATTCCACTTACCTCTTGGAACTGTTAAAAGTTAAATCGTGTTGGTTACTATTGTTGATGAGTTTGGTCCATGTAG TTGGGTTTGGTTTAAAAGTGGGGCATCTAGTTTTGGTGTTATGTTGCTGGATTGTGTCTATCATTTACCTCAACTGGTTAACTAAGGACGCGAAGGTGGG TTTTCTAGGGGGTAGTGACAGCAAGATGTGGTGGCTGAAATGGTTGGAGAAGATCTTAGGGAATAGTGGCCTAAGTCATCAATACTATTACCAATATATT GGGTCAAATAAAGTGAGGAAAGCATTGTGGAAGAAGCTTTTGCTGATATGGGTAATTGGTTGGTGCATAGTGTGTTTGTGGATCTTTTGTTGCATGAGCT TACAAGTGATTGAGAAGAGGAAAGAAACATTGACAAGTATGTGTGATGAACGGGCTAGGATGCTGCAGGATCAGTTCAATGTGAGTATGAACCATATCCA AGCCATGTCCATTCTGATCTCAACCTTCCACCATGCCAAGAGCCCCTCGGCTATAGATCAGATAACCTTTGCTAGGTATACAGAAAGAACTGCTTTTGAG AGGCCACTTACAAGTGGTGTTGCATATGCTGTAAGGGTGCTCCATTCTGAAAGGGAACAATTTGAGCAGCAACAAGGGTGGACTATTAAGAGGATGGATA CTGTGGAGGAGAAACAAGTTGAAACGAATGATTATGATCCAGAGAAATTGGAGCCCTACCCCATTCAAGAAGAATATGCTCCTGTTATCTTTGCACAAGA TACACTTTCACATGTGATTTCTATTGATATGCTTTCTAGAAAGGAAGACCGTGAGAATATGATTCGTGCAAGAGAATCAGGCAAAGGGGTTTTAACTGCA CCCTTTAGGCTGCTCAAAACAAACCGTCTCGGGGTTATCCTGACATTTGCTGTCTATAAGAGAGATCTTCCATCAAATGCATCCCCAAATGAAAGGATTC AAGCAACTAACGGGTATCTTGGTGGAGTCTTTGATGTTGAGTCACTAGTGGAGAAATTACTTCAGAAACTTGCTAGCAAGCAAACTGTAATGGTTAATGT TTATGACATAACTAATAACACCCATCCGATTGCCATGTATGGTTCAAATGCTTCAGGGGATACATTCTATCATGTCAGCACTCTTAACTTTGGAGACCCT TTCAGGAAGCATGAGATGTACTGCAGGTTCAAACAGAATCCACCGTGGCCATGGTTGTCAATGACTACTTCATTTGGCATCCTTGTTATTGCGCTCCTTG TTGGACATATTTTCCATGCCACTGTGAATCGAATTGCCAAAGTAGAAGATGATTACCATGAGATGATGGAGCTTAAAAAACGAGCTGAGGTAGCTGATGT AGCAAAATCCCAGTTTCTTGCAACTGTTTCCCATGAGATCAGAACACCAATGAATGGCGTTTTAGGGATGTTGCATATGCTTATGGACACAGACTTAGAT GTTACCCAGCAGGAATTTGTCAGAACTGCACAGGGAAGTGGAAAAGCTCTTGTGTCACTTATAAATGAGGTTTTGGATCAGGCAAAGATTGAAGCTGGTA AGCTAGAGCTTGAAGCTGTGCTCTTTGACTTACGGGCAATTTTGGATGATGTATTGTCACTATTTTCTGAGAAGTCTCAAGAAAAAGGAGTGGAGTTGGG AGTTTATGTATCAGATCACGTTCCTGAGCTACTAATAGGTGATCCAGGAAGATTTCGACAAATAATTACTAATCTCATGGGTAACTCAATTAAGTTCATG GACAAGGGGCATATTTTTGTCACTATTCATCTTGTTGAGGAGGTTGTCCATTCAATAGAAGTTGACAAGGAATCAACGTCAGAAAATACATTGAGTGGTT TCCCAGTAGCGGATAGTCGCCAAAGCTGGGAAGGATTCAAGGCTTTCAGTCAAGAGGGACCTCTTGGTTCTTTCTCATCTTCCTCCGGTGATCTCATCAA TTTGATTGTATCTGTTGAGGATACAGGTGAAGGTATTCCTCTTGAAGCTCAACACCACATCTTCACTCCGTTCATGCAGGTAGGTTCATCCATCTCCCGC AAACACGGGGGAACGGGTATTGGCCTAAGCATTAGCAAATGTTTGGTTCACCTCATGAATGGGGAAATTGGATTTGTGAGCATACCAAAGATTGGGTCAA CTTTCACATTCACTGCAGTCTTCACAAATGGACTCCCCAGTTCAAACGAGCGTAAAACTCAGCAAATCATCAACCAAACTCACCCTGCATCCTCAGAATT TGAGGGCATGACTGCAATGATTATTGATCACAGACCTGTTAGAGCAAAAGTGTCAAGATATCACATTCAAAGGCTTGGCATTCATGTGGAAATGGTTTCA GATTTAAATCAAGGTTTGCCCAATGTAGCCAACGGGAATATTGTTATTAATATGATCCTCATTGAGCAGGAGGTCTGGGATAGAGATTCAGGCATGTCAT CTCACTTTGTCAATAACATATGCAAAATTGTTCATGTGGTTCCTCCGAAGATGTTTATTCTTGTTAATTCTAGTCGTTCTAGAGCAAGTGCTGTAATATC CGGTGTTCATGATCCCGCTGTCATCACAAAACCTCTGAGAGCAAGTATGCTTGCAGCCTCACTGCAACGTGCGATGGGTGTTCGGAACAAGGGGGCTCAT AGAAATAGCGATCTCCCAAGTTTGTCTCTTTGCCATCTTCTTCGTGGGAGAAGGATTTTAATTGTTGATGACAATAGTGTGAACCGCATGGTAGCGGCTG CTGCTTTGAAAAAGTATGGAGCTGAGGTGGTTTGTGTCAGCTGTGGAAAAGAGGCCATCTCTTCACTGAAGCCACCCCATCAGTTTGATGCATGTTTCAT GGATATTCAAATGCCAGAAATAGATGGGTTTGAAGCTACAAGGATTATTCGGGACATGGAAATTAGCCTGAACAGTGAAGTGTCTGTGGATGACATTGAC AATGTTTCAAACTGGCATGTGCCAATTCTAGCTATGACAGCAGACGTTATCCAGGCAACACAAGAGCAATGCCTGAGGTGTGGCATGGATGGATATGTTT CTAAACCATTTGAAGCCGAACAGCTATATATAGAAGTTTCACGGTTTTTCCAGTCATCTTGAAAAGAAAATAGGTGCTTATCTAGCTTTCCCGTCTTTAC TCCAGGACACTCTGAAGTGCATTAATAGGTTCAGAAGTCTCCTAAGAGTAAGTACAAGTACATAGCATTCATCACTTAAAAGTTTGATGGTTTTTTTCTA TCAGAGACTGAATAATTTTAAAGGAGTGACGAAAGGATAAAAAAAGTTGTCGAGTGCAGAAATGTTTTAATATACATTTTTGGTCTATTCCATTGTTGTC TGTGAAATTCTTAGGTGTCTGTTGCTCTATAACATTTGATGTGTATCATGTCAGTTACATTGGCAGTGAGAGACAATAATGGCTCAACTTACATAGTATA CTTCCAATGATACAGAGCAAGAGATTTTTCTTACTTTAGGGCCAATTCTGAAATTCTAGTCTTTTGTGCTATTTTTTAAGGTACTTGGTTTAAAATATTT GTTATTGTGGTAGGGAGTGTACATAGGAGCCAATTTGATTGGTTGCAATTGAGTTTTACTTGGTAGTTAAAACTTAAGAGTATCAAATCCCTCTTATTCT TCCTTATAAAGTGTCTCTTATCTCACCCATCCTAAACCGGAGATCGAAAGTAATTGAGGGTTTTTTGTAGGTTATGGTGTCATATAGTTGTGTATACAAC TTTTAAGAGTACTGTGGAGTCTAGAATAGGCATGCCACATTTTCTGTGTATTGATGTATTCATGAGAGGTTGATTCAGGTGAAAGAAGGGAAATTAGCTT CTTGGAAAC
• Tissue: pods
• Gene name: LI_gene_191754;
• Additional information: details;

Expression of Ll_transcript_487050

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.6
• PS2: 0.6
• PS3: 1.5
• PW1: 0.8
• PW2: 0.6
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_487050

• Blastp: Histidine kinase 3 from Arabidopsis with 66.89% of identity
• Blastx: Histidine kinase 3 from Arabidopsis with 66.89% of identity
• Eggnog: Histidine kinase(COG0642)
• Kegg: Link to kegg annotations (AT1G27320)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463726.1)
• Pfam: CHASE domain (PF03924.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;