Ll_transcript_487051

• Id Trinity: TRINITY_DN52322_c0_g1_i18
• Name Transcript: Ll_transcript_487051
• Sequence: GGGAAAAGCACTTTGATTTTGAGTTTCACCTCTCATACTTTCAAGGATCTTTCACCTACCATTGTGTAGATTTTAAATTGTGTTGGTTACTGTTGTTGAT GAGTTTGGTCCATGTAGTTGGGTTTGGTTTAAAAGTGGGGCATCTAGTTTTGGTGTTATGTTGCTGGATTGTGTCTATCATTTACCTCAACTGGTTAACT AAGGACGCGAAGGTGGGTTTTCTAGGGGGTAGTGACAGCAAGATGTGGTGGCTGAAATGGTTGGAGAAGATCTTAGGGAATAGTGGCCTAAGTCATCAAT ACTATTACCAATATATTGGGTCAAATAAAGTGAGGAAAGCATTGTGGAAGAAGCTTTTGCTGATATGGGTAATTGGTTGGTGCATAGTGTGTTTGTGGAT CTTTTGTTGCATGAGCTTACAAGTGATTGAGAAGAGGAAAGAAACATTGACAAGTATGTGTGATGAACGGGCTAGGATGCTGCAGGATCAGTTCAATGTG AGTATGAACCATATCCAAGCCATGTCCATTCTAATCTCAACTTTTCACCATGCCAAGGACCCCTCTGCCATTGACCAGAAAACTTTTGCCAGGTACACAG AAAGAACTGCTTTTGAGAGGCCCCTTACAAGTGGTGTTGCATATGCAGTAAGGGTGCTCCATTCTGAGAGGGAACAATTTGAGAAGCAACAAGGGTGGAC TATCAAGAGGATGGATAACCTTGAACCGAATCCAGTTCATAAGGACGAATATGCCCCCGAGTCATTGGAGCCATCCCCTATTAAGGAAGAATATGCCCCT GAGTCATTGGAGCCATCCCCTATTAAGGAAGAATATGCTCCTGTCATCTTTGCACAGGATACAATTTCACATGTCATTTCTGTTGATGTGCTTTCCGGAA AGGAAGACCGTGAAAATGTGTTACGTGCAAGAGAATCAGGCAAAGGGGTTTTAACTGCTCCCTTCAGGCTTCTCAAAACAAATCGTCTAGGGGTAATATT GACATTTGCTGTCTACAAAAGAGAACTTCCACCAAATGCAACCCCAAATGAAAGGATTCAAGCCACTAATGGGTATCTTGGCGGGGTTTTCGATATCGAG TCTTTAGTGGAGAAATTGCTTCAGCAACTTGCTAGCAAGCAAACAGTAATTGTTAGTGTGTATGATACTACAAATCATACCCACCCTATTCCCATGTATG GTTCAAATGTATCAGGTGATGGCTTCTATCATGTCAGTGCTCTCAGCTTTGGAGATCCTTTCAGGAAGCATGAGATGCATTGCAGGTTCAAACAGACACC ACCATGGCCATGGTTGGCAATAACTACATCAATTGGAATCCTTGTTATTGCACTCCTTGTTGGATATATTTTTCATGCCACTGTGAATCGAATTGCAAAA GTAGAGGATGATTACCATCAAATGACGGAGCTTAAAAAACGAGCCGAGGCAGCTGATGTTGCAAAATCTCAGTTCCTTGCTACTGTTTCCCATGAGATCC GAACACCAATGAATGGTGTGTTAGGTATGATGAACATGCTTATGGACACAGATCTAGATGTAACTCAACAGGAATATGTTAGAACAGCACAGGGAAGTGG AAAAGTGTTGGTATCAATTATAAATGAGGTTTTGGACCAGGCAAAGATTGCATCTGGCAAGCTAGAGCTCGAGGCAGTGTTGTTTGATATAAGAGCAATT TTCGATGATGTGATGTCACTATTTTCTGAGAAGTCTCAAGCAAAAGGAATAGAGTTGGCAGTCTATGTGTCAGATCGAGTTCCTGAAAAGCTAATAGGCG ATCCGGGAAGGTTTCGGCAAATCCTTACGAATCTCGTGGGTAACTCTATCAAGTTCACAGACAAAGGGCATATCTTTATCACCATCCATCTAGTTGAGGA GGTTGTCCACTCAATAGAAGTTGACAAAGAATTGACTTCAAAAGATACCCTAAGTGGTTTTGCCGTTGCTGATAGTCGCCGGAGCTGGGAAGGATTTGAG GCTTTCAGTCAAGAGGGACCACTTGGTTCTTTGTCATCAACCTCAAGTGATCTCATCAATTTGATTGTATCTGTTGAGGATACAGGTGAAGGAATTCCTT TAGAAGCACAGTCACTCATCTTCACTCCATTCATGCAGGTCGGTCCATCAATCTCTCGAAAACATGGGGGCACAGGCATTGGTCTAAGCATTAGCAAGTG TTTGGTTGAGCTAATGAATGGAGAAATTGGATTTGTGAGCGAACCTAAGATCGGATCCACTTTCACATTTACCGCTGTGTTCACCAATGGATGTCCTAAT TCCAGTGAGTGCAAAACCCAGCAAATCAATAACCAACCTCACACTGTATCCTCAGAATTTCAAGGCATGGTTGCGTTAGTTATTGACCCCCGCCCAGTTC GAGCTAAAGTGTCAAGATATCACGTTCAGAGACTTGGCATTCATGTTGAATTAGTTTCAGATTTATATCAAGGTTTATCCACCATAGGCAATGGCAATGT AGTTATCAATATGGTCCTGATTGAACAGGAGATATGGGATAGAGATTCAGCCATTTCGACCGACTTTGTCAATAGTGCTAGTAAAGTTGATCGCCGTGGT GCTCCTCCTCCAAAACTATTCATTCTTGCCAATTCTAGCAGTTCTATAACATCAGGTGTTCATAATCCAACTGTCATCATAAAACCTTTAAGAGCAAGTA TGCTTGCTGCTTCGCTACAACGAGCCATGGGCGTTGGGAACAAGAGGAATGTTCAAGCATTATCTCTCCACCATCTTCTTCCTGGCAGGAAAATTCTAAT TGTAGATGACAATAGTGTGAACCGCACCGTAGCGGCTGGTGCTTTGAAAAAGTATGGAGCTAGTGTGGTTTGTGCAAGCAGCGGAAAAGATGCCATCTCT TTGCTGAAGCCACCTCATCAGTTTGATGCCTGTTTCATGGATATTCAAATGCCCGAAATGGATGGTTTTGAGGCTACAATGAGAATTAGGGAGATGGAAC GCGGTATGAACAGAGAAATGTCTGCAGAAGCCTTTGAGAATAGTTCAAAATGGCATATACCAATTTTAGCTATGACTGCAGATGTGATGCAAGCTACACA TGAGGTTTGCCTAAACCGTGGCATGGATGGATATGTTTCAAAACCATTTGAAGCTGAACAGCTTTATAGAGAAGTTTCGCGGTTTTTCCAATCATCTTGA AATAGAAAATACAGATCTCATGTAAACCAGATGACTCATGATAATGGAAGCATCAGTGTCGGTTCGTCAGGATAGTTAGAAGTGCATAAATAGGTTCAGA AGTCTACTCAGAGGAGTGTACATAGGAGCCAAGTTTGATTGGTTGAGGGGAATTTGAAGACCCCAGGTGTATTATATGATACAAGTTCAGGTGTCTGATA ATAATAGTAGTGAAAGACACAATACTCTAGTAAATTTACATTCTATGTGCATTATTTATGTATATATGAGATTGATTCAGATGGGTTAGAAAGAAAGTAG CTTCTTGGTGCAAAGGTGGTAGAAGGGCACCATGCAGCATGCACCATATGAATTACAACAAAGACAAGTAGTTCTAGTGGCCAAGACAGCTTCTTAATAG TGCAAGATTTCAGCTTCTACAAAACATGTAATTGATACATTGTAATGTATAATATTTGAGCCATCTATCATTTTTTATTTATCAATTTGTGCATTTAAAG TTGTGGAATTCCTTTGACTTGTTATATATGTTGCCTTCCAACTTTGTTAGTTTTATGCAAAATAAAATACAGATCTGGGTCCACTTGTAATAACATGGTA AGATTGTATAGATGAGTTTAATACATAAATGTTGTTTTTAC
• Tissue: pods
• Gene name: LI_gene_191754;
• Additional information: details;

Expression of Ll_transcript_487051

FPKM

• PAB: 15.1
• PNAB: 14.3
• PS1: 11.6
• PS2: 5.1
• PS3: 8.8
• PW1: 11.2
• PW2: 12.7
• PW3: 7.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_487051

• Blastp: Histidine kinase 3 from Arabidopsis with 66.73% of identity
• Blastx: Histidine kinase 3 from Arabidopsis with 66.64% of identity
• Eggnog: Histidine kinase(COG0642)
• Kegg: Link to kegg annotations (AT1G27320)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416775.1)
• Pfam: CHASE domain (PF03924.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;