| Id Trinity | TRINITY_DN52322_c0_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_487053 |
| Sequence | GAAAAAGTTTATGCTTATTCTTGATATTCTGGTTCCATGCAAGGGTATTTTATGTGAACAAAAATATACAGCAATGCAAAATTACAAGCACACTCAGAGT TAAAGACTTAGCGTGTAGAAGTTGTCTAGTGCAATGGACGGATAGGGATGTGAACACAACTACAAAGTAAAGGAAAGTTGAGAAAAGCAGTGATTTCTGT TCAGTGGAACTTCAACTTTTTCTGCCATATATTATATACTATATCATCAAATATTTCTTTTTATATCAATTAGCATTGTGTTATATTAATATTTATGTCT CTCTAGTATTTTTTTATTTTTGAGTGGATAGTTGGAAAAGAGAAAATGGCCAATACAAGAAAACATTGTTGCTATCATATTCTTATCATGTCTTTTGCAA AATTCTCCTATCTCTCATTGTTCATGAACTCATTCTTTTAACTTCTATGTCTTTTCTAGCTTCATTTCTATCCACTCCATTAATTTTACTTCTATCTCAG TCTTTTAAAGTGTACTTCTTGTTCTACTTTGTAAAAATCTATGCTTTAAACCTTAAACATTAACACTATCTTGCTGCTTCTCTATATTGTCTGATCTTAC AAATTTGAACATCATTGCAAGCTGGGTTTCTTCATTGTGTAATGGTAACTTCAGATTTGTTAACTAAAAAAGGAATCTTTGCAGGATTTGGGAGGTGGTT GGTGTTTTTGTTCTTCATTTCTTGAATTCTAGTCTCTTGCAAGTTACAACCATTTCAGAACTTTTATTCAACAATAGGATTTTAGTGTTTGTCTGGAGAT TCTGTGGATTTGACAGTGATTCACAATTCCACTTACCTCTTGGAACTGTTAAAAGTTAAATCGTGTTGGTTACTATTGTTGATGAGTTTGGTCCATGTAG TTGGGTTTGGTTTAAAAGTGGGGCATCTAGTTTTGGTGTTATGTTGCTGGATTGTGTCTATCATTTACCTCAACTGGTTAACTAAGGACGCGAAGGTGGG TTTTCTAGGGGGTAGTGACAGCAAGATGTGGTGGCTGAAATGGTTGGAGAAGATCTTAGGGAATAGTGGCCTAAGTCATCAATACTATTACCAATATATT GGGTCAAATAAAGTGAGGAAAGCATTGTGGAAGAAGCTTTTGCTGATATGGGTAATTGGTTGGTGCATAGTGTGTTTGTGGATCTTTTGTTGCATGAGCT TACAAGTGATTGAGAAGAGGAAAGAAACATTGACAAGTATGTGTGATGAACGGGCTAGGATGCTGCAGGATCAGTTCAATGTGAGTATGAACCATATCCA AGCCATGTCCATTCTGATCTCAACCTTCCACCATGCCAAGAGCCCCTCGGCTATAGATCAGATAACCTTTGCTAGGTATACAGAAAGAACTGCTTTTGAG AGGCCACTTACAAGTGGTGTTGCATATGCTGTAAGGGTGCTCCATTCTGAAAGGGAACAATTTGAGCAGCAACAAGGGTGGACTATTAAGAGGATGGATA CTGTGGAGGAGAAACAAGTTGAAACGAATGATTATGATCCAGAGAAATTGGAGCCCTACCCCATTCAAGAAGAATATGCTCCTGTTATCTTTGCACAAGA TACACTTTCACATGTGATTTCTATTGATATGCTTTCTAGAAAGGAAGACCGTGAGAATATGATTCGTGCAAGAGAATCAGGCAAAGGGGTTTTAACTGCA CCCTTTAGGCTGCTCAAAACAAACCGTCTCGGGGTTATCCTGACATTTGCTGTCTATAAGAGAGATCTTCCATCAAATGCATCCCCAAATGAAAGGATTC AAGCAACTAACGGGTATCTTGGTGGAGTCTTTGATGTTGAGTCACTAGTGGAGAAATTACTTCAGAAACTTGCTAGCAAGCAAACTGTAATTGTTAATGT TTATGACATTACAAATCACACCCATCACATTGCCATGTATGGTTCAAACATTTCAGGAGATTCTTTCTATCATGCCAGCACTCTTAACTTCGGAGACCCT TTCAGGAAGCATGAGATGCACTGCAGGTTCAAACAGAAACCACCATGGCCATGGTTGTCAATAACTACTTCAATCGGCGTCCTTTTCATTGCACTCCTTG TTGGACATATTTTCTATGCCACTGTGAATCGAATTGCCAAAGTAGTAGATGATTACTGTGAGATGAGGGAGCTTAAGAAGAGAGCTGAGGCAGCTGATGT AGCAAAATCCCAGTTTCTTGCAACTGTTTCCCATGAGATCAGAACACCAATGAATGGGGTTTTAGGGATGCTGCATATGCTTATGGACACAGATCTTGAT GTAACTCAGAAGGAATTTGTCAGAACTGCAGAAGGAAGTGGAAAAGCTCTGATGTCACTTATAAATGAGGTTTTGGATCAGGCAAAGATTGAAGCTGGTA AGCTAGAGCTTGAAGCAGTACTTTTTGACTTGCGGGCAATTTTGGATGATGTGTTGTCACTGTTTTATGAGAAGTCTCAAGAAAAAGGAGTAGAGGTAAT ATTCCTCTCTCCTATTGTTTGCCCATCATGGTGGAGTTTTCATAATTTACATTGTGTAATGAGCAATGCCACACCTTCCTAATAAATCCTCCTAAATATC TTCATAATACTAGATAAAGTAGTCATTGTAAATGCTCATGTTCCCTTGTCTTGGAACTAGATAACCCTTTAAAATATTTCCATCTTTACTAATTAGGAGG ATTTTGAGGAGGATGTAGACTCATTCTTGTGTAATTATAGCTCATCGCTTTTCATGGTTTATTTGTCCTGGAGCACAGTTGGGAGTTTATGTGTCACATC AGGTTCCTGAGTTACTAATAGGTGATCCAGGAAGATTTCGACAAATAATTACAAATCTCGTGGGTAACTCAATTAAGTTTACAGACAAGGGGCATGTTTT TGTCACGGTTCATCTCATTGAGGAGGTTGTCAATTCAATAGAAGTTGATAAAGAATCAACCTCAGAAAATACCTTGAGTGGTTTCCCTGTAGCTGATAGT CGCCGAAGCTGGGAAGGATTCAAGGCTTTCAGTCACGAGGGACCTATCGGTTATTTCTCATCTTCCTCTAATGATCTCATTAGTTTGATTATATCTGTTG AGGATACAGGTGAAGGTATTCCTCTAGAAGCTCAGCCCCGCATCTTCACTCCATTCATGCAGGTAGGTCCATCCATCTCCCGCAAACATGGAGGAACAGG AATCGGCCTAAGCATTAGCAAGTGTTTGGTTTGCCTCATGAATGGGGAAATTGGATTTGTGAGTATACCAAAGATTGGATCCACCTTCACATTCACTACA GTCTTCGGGAATGGACTCCCCAGTCCAAATGAGTCTAAAATTCAGCAAATCGTCAACCAACCTCACCTTGCATCTTCAGAATTTGAGGGTAAGACTGCAA TGATTATTGACCACAGACCCGTTAGAGCAAAAGTGTCAAGATATCACATTCAAAGGCTTGGCATTCATGTTGAGATGGTTTCAGATTTAGATGAAGGTTT GTCCGCTGTGACCAATGGTAACATGTTTATTGATATGGTCCTCATTGAGCAGGAGGTATGGGACAAAGATTCAGACATGTCATCTCACTTTGTCAATAAC ATAGGGAAAATTGTTCATGTGATTCCTCCAAAGATGTTCATTCTTGTTAACTCTAGCAGTTCTTCTAGAGCAAGTACTATAACATCTAGTGTTCCTAACG CCATTGTTATCACAAAACCTCTGAGAGCGAGTATGCTTGTAGCCTCATTACAACGTGCTATGGGTCTTCAGAACAAGGGGACTCCTAGGAACGATGATGT CCCACGTTTGCCTCTTCGCCATCTTCTTCATGGGAGAAAAATTCTAATTGTAGATGACAATTGTGTGAACCGCATGGTAGCGGTTGCTGCTTTGAAAAAG TATGGAGCAGAAATGGTTTGTGTCAGCAGTGGAAAAGAAGCCATCTCTTCACTGAAGCCACCACATCAATTTGATGCCTGTTTCATGGATATTCAAATGC CAGAAATGGATGGGTTTGAAGCTACAAGGATTATACGGGACATGGAACTTAGCATGAATAATAAAGTGTCTGTGGATGACTGTGATAATGTTTCAAATTG GCATGTGCCCATTATAGCCATGACAGCAGACGTGATCCAGGCGACACAGGAGGAATGTCTAAAGTGTGGCATGGATGGATATGTTTCTAAACCATTTGAA GCTGAACAACTTTATAGAGAAGTTTCATTGATTTACCAGTCATCTTGAAAATAAAATAGGCACTAATCTAAACCGGGGGATTGTCGATAATCGAAGCTCG TCCGTCTTTACTCTAGGACACTCTGAAGTGCATAAATAGGTTCAGAAGTCTACTCAGAGTAAGTACCTTATTTTGGAAATGCATATTATAGCACTTCACT TCAAAAGCTTGACTATTTCTTCTAAAGTGACTGAAGAATGTTATCTATATATATCATCGAAAAAATGTGAGGCAGAGTGAATAAAAAAACCACTATTCTA GACTTCAGAAAGAGTCATGTTATCTGAACATCAAGTTTTGAATATCATACACACATATACAGATACATAGGGCATATCTTCTCACTTGATTTGTTCCCTT TATGTATGTATACATGCATACATACATATATATGACTTACTATTTATCTTCTTTGCATACATGCATTTGGAAATGCTTCAGAAAAACAAAGGAATCCGGT ATGATATCCTTGTTTCGATGTTAAAGAAAATTCCCCCCTTCAAAATGATTGATTCTTTCATTTGTGACCTATTCCATTGTCTTATTTTTGGTGTGCTTGA AGATCCTTGTTCTAAAATATTGTTTGTTGTGGCAGGGAGTGTACATAGGAGCCAAGTTTGATTGGTTGAGGGGAATTTGAAGACCCCAGGTGTATTATAT GATACAAGTTCAGGTGTCTGATAATAATAGTAGTGAAAGACACAATACTCTAGTAAATTTACATTCTATGTGCATTATTTATGTATATATGAGATTGATT CAGATGGGTTAGAAAGAAAGTAGCTTCTTGGTGCAAAGGTGGTAGAAGGGCACCATGCAGCATGCACCATATGAATTACAACAAAGACAAGTAGTTCTAG TGGCCAAGACAGCTTCTTAATAGTGCAAGATTTCAGCTTCTACAAAACATGTAATTGATACATTGTAATGTATAATATTTGAGCCATCTATCATTTTTTA TTTATCAATTTGTGCATTTAAAGTTGTGGAATTCCTTTGACTTGTTATATATGTTGCCTTCCAACTTTGTTAGTTTTATGCAAAATAAAATACAGATCTG GGTCCACTTGTAATAACATGGTAAGATTGTATAGATGAGTTTAATACATAAATGTTGTTTTTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_191754; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_487053
| Blastp | Histidine kinase 3 from Arabidopsis with 69.45% of identity |
|---|---|
| Blastx | Histidine kinase 3 from Arabidopsis with 69.45% of identity |
| Eggnog | Histidine kinase(COG0642) |
| Kegg | Link to kegg annotations (AT1G27320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416775.1) |
| Pfam | CHASE domain (PF03924.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |