Id Trinity | TRINITY_DN52322_c0_g1_i7 |
---|---|
Name Transcript | Ll_transcript_487039 |
Sequence | GAAAAAGTTTATGCTTATTCTTGATATTCTGGTTCCATGCAAGGGTATTTTATGTGAACAAAAATATACAGCAATGCAAAATTACAAGCACACTCAGAGT TAAAGACTTAGCGTGTAGAAGTTGTCTAGTGCAATGGACGGATAGGGATGTGAACACAACTACAAAGTAAAGGAAAGTTGAGAAAAGCAGTGATTTCTGT TCAGTGGAACTTCAACTTTTTCTGCCATATATTATATACTATATCATCAAATATTTCTTTTTATATCAATTAGCATTGTGTTATATTAATATTTATGTCT CTCTAGTATTTTTTTATTTTTGAGTGGATAGTTGGAAAAGAGAAAATGGCCAATACAAGAAAACATTGTTGCTATCATATTCTTATCATGTCTTTTGCAA AATTCTCCTATCTCTCATTGTTCATGAACTCATTCTTTTAACTTCTATGTCTTTTCTAGCTTCATTTCTATCCACTCCATTAATTTTACTTCTATCTCAG TCTTTTAAAGTGTACTTCTTGTTCTACTTTGTAAAAATCTATGCTTTAAACCTTAAACATTAACACTATCTTGCTGCTTCTCTATATTGTCTGATCTTAC AAATTTGAACATCATTGCAAGCTGGGTTTCTTCATTGTGTAATGGTAACTTCAGATTTGTTAACTAAAAAAGGAATCTTTGCAGGATTTGGGAGGTGGTT GGTGTTTTTGTTCTTCATTTCTTGAATTCTAGTCTCTTGCAAGTTACAACCATTTCAGAACTTTTATTCAACAATAGGATTTTAGTGTTTGTCTGGAGAT TCTGTGGATTTGACAGTGATTCACAATTCCACTTACCTCTTGGAACTGTTAAAAGTTAAATCGTGTTGGTTACTATTGTTGATGAGTTTGGTCCATGTAG TTGGGTTTGGTTTAAAAGTGGGGCATCTAGTTTTGGTGTTATGTTGCTGGATTGTGTCTATCATTTACCTCAACTGGTTAACTAAGGACGCGAAGGTGGG TTTTCTAGGGGGTAGTGACAGCAAGATGTGGTGGCTGAAATGGTTGGAGAAGATCTTAGGGAATAGTGGCCTAAGTCATCAATACTATTACCAATATATT GGGTCAAATAAAGTGAGGAAAGCATTGTGGAAGAAGCTTTTGCTGATATGGGTAATTGGTTGGTGCATAGTGTGTTTGTGGATCTTTTGTTGCATGAGCT TACAAGTGATTGAGAAGAGGAAAGAAACATTGACAAGTATGTGTGATGAACGGGCTAGGATGCTGCAGGATCAGTTCAATGTGAGTATGAACCATATCCA AGCCATGTCCATTCTGATCTCAACCTTCCACCATGCCAAGAGCCCCTCGGCTATAGATCAGATAACCTTTGCTAGGTATACAGAAAGAACTGCTTTTGAG AGGCCACTTACAAGTGGTGTTGCATATGCTGTAAGGGTGCTCCATTCTGAAAGGGAACAATTTGAGCAGCAACAAGGGTGGACTATTAAGAGGATGGATA CTGTGGAGGAGAAACAAGTTGAAACGAATGATTATGATCCAGAGAAATTGGAGCCCTACCCCATTCAAGAAGAATATGCTCCTGTTATCTTTGCACAAGA TACACTTTCACATGTGATTTCTATTGATATGCTTTCTAGAAAGGAAGACCGTGAGAATATGATTCGTGCAAGAGAATCAGGCAAAGGGGTTTTAACTGCA CCCTTTAGGCTGCTCAAAACAAACCGTCTCGGGGTTATCCTGACATTTGCTGTCTATAAGAGAGATCTTCCATCAAATGCATCCCCAAATGAAAGGATTC AAGCAACTAACGGGTATCTTGGTGGAGTCTTTGATGTTGAGTCACTAGTGGAGAAATTACTTCAGAAACTTGCTAGCAAGCAAACTGTAATGGTTAATGT TTATGACATAACTAATAACACCCATCCGATTGCCATGTATGGTTCAAATGCTTCAGGGGATACATTCTATCATGTCAGCACTCTTAACTTTGGAGACCCT TTCAGGAAGCATGAGATGTACTGCAGGTTCAAACAGAATCCACCGTGGCCATGGTTGTCAATGACTACTTCATTTGGCATCCTTGTTATTGCGCTCCTTG TTGGACATATTTTCCATGCCACTGTGAATCGAATTGCCAAAGTAGAAGATGATTACCATGAGATGATGGAGCTTAAAAAACGAGCTGAGGTAGCTGATGT AGCAAAATCCCAGTTTCTTGCAACTGTTTCCCATGAGATCAGAACACCAATGAATGGCGTTTTAGGGATGTTGCATATGCTTATGGACACAGACTTAGAT GTTACCCAGCAGGAATTTGTCAGAACTGCACAGGGAAGTGGAAAAGCTCTTGTGTCACTTATAAATGAGGTTTTGGATCAGGCAAAGATTGAAGCTGGTA AGCTAGAGCTTGAAGCTGTGCTCTTTGACTTACGGGCAATTTTGGATGATGTATTGTCACTATTTTCTGAGAAGTCTCAAGAAAAAGGAGTGGAGTTGGG AGTTTATGTATCAGATCACGTTCCTGAGCTACTAATAGGTGATCCAGGAAGATTTCGACAAATAATTACTAATCTCATGGGTAACTCAATTAAGTTCATG GACAAGGGGCATATTTTTGTCACTATTCATCTTGTTGAGGAGGTTGTCCATTCAATAGAAGTTGACAAGGAATCAACGTCAGAAAATACATTGAGTGGTT TCCCAGTAGCGGATAGTCGCCAAAGCTGGGAAGGATTCAAGGCTTTCAGTCAAGAGGGACCTCTTGGTTCTTTCTCATCTTCCTCCGGTGATCTCATCAA TTTGATTGTATCTGTTGAGGATACAGGTGAAGGTATTCCTCTTGAAGCTCAACACCACATCTTCACTCCGTTCATGCAGGTAGGTTCATCCATCTCCCGC AAACACGGGGGAACGGGTATTGGCCTAAGCATTAGCAAATGTTTGGTTCACCTCATGAATGGGGAAATTGGATTTGTGAGCATACCAAAGATTGGGTCAA CTTTCACATTCACTGCAGTCTTCACAAATGGACTCCCCAGTTCAAACGAGCGTAAAACTCAGCAAATCATCAACCAAACTCACCCTGCATCCTCAGAATT TGAGGGCATGACTGCAATGATTATTGATCACAGACCTGTTAGAGCAAAAGTGTCAAGATATCACATTCAAAGGCTTGGCATTCATGTGGAAATGGTTTCA GATTTAAATCAAGGTTTGCCCAATGTAGCCAACGGGAATATTGTTATTAATATGATCCTCATTGAGCAGGAGGTCTGGGATAGAGATTCAGGCATGTCAT CTCACTTTGTCAATAACATATGCAAAATTGTTCATGTGGTTCCTCCGAAGATGTTTATTCTTGTTAATTCTAGTCGTTCTAGAGCAAGTGCTGTAATATC CGGTGTTCATGATCCCGCTGTCATCACAAAACCTCTGAGAGCAAGTATGCTTGCAGCCTCACTGCAACGTGCGATGGGTGTTCGGAACAAGGGGGCTCAT AGAAATAGCGATCTCCCAAGTTTGTCTCTTTGCCATCTTCTTCGTGGGAGAAGGATTTTAATTGTTGATGACAATAGTGTGAACCGCATGGTAGCGGCTG CTGCTTTGAAAAAGTATGGAGCTGAGGTGGTTTGTGTCAGCTGTGGAAAAGAGGCCATCTCTTCACTGAAGCCACCCCATCAGTTTGATGCATGTTTCAT GGATATTCAAATGCCAGAAATAGATGGGTTTGAAGCTACAAGGATTATTCGGGACATGGAAATTAGCCTGAACAGTGAAGTGTCTGTGGATGACATTGAC AATGTTTCAAACTGGCATGTGCCAATTCTAGCTATGACAGCAGACGTTATCCAGGCAACACAAGAGCAATGCCTGAGGTGTGGCATGGATGGATATGTTT CTAAACCATTTGAAGCCGAACAGCTATATATAGAAGTTTCACGGTTTTTCCAGTCATCTTGAAAAGAAAATAGGTGCTTATCTAGCTTTCCCGTCTTTAC TCCAGGACACTCTGAAGTGCATTAATAGGTTCAGAAGTCTCCTAAGAGTAAGTTCCCCATTTAACAGCCAGTGCATAGTCTTTCACCACTTAAAAGTTTG ATGGTTTTTCCATAAGAGACTGAAGATTTTATTTTTTTAAAAGGAGTGGTGAAAGGATTAAAAAAAAAAATACTTGCAGAGTGCATGAATGGTTGAGTTT ACCTTTTTGACTTATTCCATTGTCTTCTGTGAGATTCCTTGGTAACTATTGCTCTATATCATTGCATGTGTATCACATAATTTGAAGTGAGAGACAACAA TGACTCACAAAAACTTACATGTGACACACTCAATGTTACAGATCTCTTTTCCTTGTGTTGTGTTTGAAGGTCCTTGGTTTAAAATATTTGCTTTTGTGGC AGGGAGTGTACAAAGGAGCCAAATTTGATTGGTTGTAATTGGTAGTTAAGGTATCAATTCTCTCTAGTTCTTCGTTGTAAAGTCAGTTTCTTATCTCACC CATCTTAAACTGCAAAATGGAAATGATTGAGGTTTTTTGAATACCCTGATGTATTATAATAGAGATTCTAGTGTCACATACTTGTGTAGTGTATGTAACT ATGTATACAACTTATAAGAGTACTGTAGAGACTGGCCTAGGCAAGTCACATTTTGTGTATTAATGTATGTATTCATAAGAGGTTGATTCTGGTAAAAGAA AGAATTATAGCTTCTTGTTGGCAACAAAGTGGAGGAGGTGCACACCATAAAACCATGTAAATGTATGATTCACAATAGTGATGGTGTTTGATGAGTACCT ACAGCAACATTGCTTCATTTTTTAGGTAAAAACATTGCTTCCTTTTGTTTCTAAACAATGCCTGATTCTGTTTTTAAACATTTAACTGATACATTGTCCT AAGTATTTGAGTAATTCGCCGATATCTACA BLAST |
Tissue | pods |
Gene name | LI_gene_191754; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_487039
Blastp | Histidine kinase 3 from Arabidopsis with 66.89% of identity |
---|---|
Blastx | Histidine kinase 3 from Arabidopsis with 66.89% of identity |
Eggnog | Histidine kinase(COG0642) |
Kegg | Link to kegg annotations (AT1G27320) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463726.1) |
Pfam | CHASE domain (PF03924.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |