Ll_transcript_487040

• Id Trinity: TRINITY_DN52322_c0_g1_i8
• Name Transcript: Ll_transcript_487040
• Sequence: GAAAAAGTTTATGCTTATTCTTGATATTCTGGTTCCATGCAAGGGTATTTTATGTGAACAAAAATATACAGCAATGCAAAATTACAAGCACACTCAGAGT TAAAGACTTAGCGTGTAGAAGTTGTCTAGTGCAATGGACGGATAGGGATGTGAACACAACTACAAAGTAAAGGAAAGTTGAGAAAAGCAGTGATTTCTGT TCAGTGGAACTTCAACTTTTTCTGCCATATATTATATACTATATCATCAAATATTTCTTTTTATATCAATTAGCATTGTGTTATATTAATATTTATGTCT CTCTAGTATTTTTTTATTTTTGAGTGGATAGTTGGAAAAGAGAAAATGGCCAATACAAGAAAACATTGTTGCTATCATATTCTTATCATGTCTTTTGCAA AATTCTCCTATCTCTCATTGTTCATGAACTCATTCTTTTAACTTCTATGTCTTTTCTAGCTTCATTTCTATCCACTCCATTAATTTTACTTCTATCTCAG TCTTTTAAAGTGTACTTCTTGTTCTACTTTGTAAAAATCTATGCTTTAAACCTTAAACATTAACACTATCTTGCTGCTTCTCTATATTGTCTGATCTTAC AAATTTGAACATCATTGCAAGCTGGGTTTCTTCATTGTGTAATGGTAACTTCAGATTTGTTAACTAAAAAAGGAATCTTTGCAGGATTTGGGAGGTGGTT GGTGTTTTTGTTCTTCATTTCTTGAATTCTAGTCTCTTGCAAGTTACAACCATTTCAGAACTTTTATTCAACAATAGGATTTTAGTGTTTGTCTGGAGAT TCTGTGGATTTGACAGTGATTCACAATTCCACTTACCTCTTGGAACTGTTAAAAGTTAAATCGTGTTGGTTACTATTGTTGATGAGTTTGGTCCATGTAG TTGGGTTTGGTTTAAAAGTGGGGCATCTAGTTTTGGTGTTATGTTGCTGGATTGTGTCTATCATTTACCTCAACTGGTTAACTAAGGACGCGAAGGTGGG TTTTCTAGGGGGTAGTGACAGCAAGATGTGGTGGCTGAAATGGTTGGAGAAGATCTTAGGGAATAGTGGCCTAAGTCATCAATACTATTACCAATATATT GGGTCAAATAAAGTGAGGAAAGCATTGTGGAAGAAGCTTTTGCTGATATGGGTAATTGGTTGGTGCATAGTGTGTTTGTGGATCTTTTGTTGCATGAGCT TACAAGTGATTGAGAAGAGGAAAGAAACATTGACAAGTATGTGTGATGAACGGGCTAGGATGCTGCAGGATCAGTTCAATGTGAGTATGAACCATATCCA AGCCATGTCCATTCTGATCTCAACCTTCCACCATGCCAAGAGCCCCTCGGCTATAGATCAGATAACCTTTGCTAGGTATACAGAAAGAACTGCTTTTGAG AGGCCACTTACAAGTGGTGTTGCATATGCTGTAAGGGTGCTCCATTCTGAAAGGGAACAATTTGAGCAGCAACAAGGGTGGACTATTAAGAGGATGGATA CTGTGGAGGAGAAACAAGTTGAAACGAATGATTATGATCCAGAGAAATTGGAGCCCTACCCCATTCAAGAAGAATATGCTCCTGTTATCTTTGCACAAGA TACACTTTCACATGTGATTTCTATTGATATGCTTTCTAGAAAGGAAGACCGTGAGAATATGATTCGTGCAAGAGAATCAGGCAAAGGGGTTTTAACTGCA CCCTTTAGGCTGCTCAAAACAAACCGTCTCGGGGTTATCCTGACATTTGCTGTCTATAAGAGAGATCTTCCATCAAATGCATCCCCAAATGAAAGGATTC AAGCAACTAACGGGTATCTTGGTGGAGTCTTTGATGTTGAGTCACTAGTGGAGAAATTACTTCAGAAACTTGCTAGCAAGCAAACTGTAATGGTTAATGT TTATGACATAACTAATAACACCCATCCGATTGCCATGTATGGTTCAAATGCTTCAGGGGATACATTCTATCATGTCAGCACTCTTAACTTTGGAGACCCT TTCAGGAAGCATGAGATGTACTGCAGGTAAGAGTAATGCTGCAGGAGGAGTTTGTATCTTCGTCCTTCTGCCAAATAGGTTCAAACAGAATCCACCGTGG CCATGGTTGTCAATGACTACTTCATTTGGCATCCTTGTTATTGCGCTCCTTGTTGGACATATTTTCCATGCCACTGTGAATCGAATTGCCAAAGTAGAAG ATGATTACCATGAGATGATGGAGCTTAAAAAACGAGCTGAGGTAGCTGATGTAGCAAAATCCCAGTTTCTTGCAACTGTTTCCCATGAGATCAGAACACC AATGAATGGCGTTTTAGGGATGTTGCATATGCTTATGGACACAGACTTAGATGTTACCCAGCAGGAATTTGTCAGAACTGCACAGGGAAGTGGAAAAGCT CTTGTGTCACTTATAAATGAGGTTTTGGATCAGGCAAAGATTGAAGCTGGTAAGCTAGAGCTTGAAGCTGTGCTCTTTGACTTACGGGCAATTTTGGATG ATGTATTGTCACTATTTTCTGAGAAGTCTCAAGAAAAAGGAGTGGAGTTGGGAGTTTATGTATCAGATCACGTTCCTGAGCTACTAATAGGTGATCCAGG AAGATTTCGACAAATAATTACTAATCTCATGGGTAACTCAATTAAGTTCATGGACAAGGGGCATATTTTTGTCACTATTCATCTTGTTGAGGAGGTTGTC CATTCAATAGAAGTTGACAAGGAATCAACGTCAGAAAATACATTGAGTGGTTTCCCAGTAGCGGATAGTCGCCAAAGCTGGGAAGGATTCAAGGCTTTCA GTCAAGAGGGACCTCTTGGTTCTTTCTCATCTTCCTCCGGTGATCTCATCAATTTGATTGTATCTGTTGAGGATACAGGTGAAGGTATTCCTCTTGAAGC TCAACACCACATCTTCACTCCGTTCATGCAGGTAGGTTCATCCATCTCCCGCAAACACGGGGGAACGGGTATTGGCCTAAGCATTAGCAAATGTTTGGTT CACCTCATGAATGGGGAAATTGGATTTGTGAGCATACCAAAGATTGGGTCAACTTTCACATTCACTGCAGTCTTCACAAATGGACTCCCCAGTTCAAACG AGCGTAAAACTCAGCAAATCATCAACCAAACTCACCCTGCATCCTCAGAATTTGAGGGCATGACTGCAATGATTATTGATCACAGACCTGTTAGAGCAAA AGTGTCAAGATATCACATTCAAAGGCTTGGCATTCATGTGGAAATGGTTTCAGATTTAAATCAAGGTTTGCCCAATGTAGCCAACGGGAATATTGTTATT AATATGATCCTCATTGAGCAGGAGGTCTGGGATAGAGATTCAGGCATGTCATCTCACTTTGTCAATAACATATGCAAAATTGTTCATGTGGTTCCTCCGA AGATGTTTATTCTTGTTAATTCTAGTCGTTCTAGAGCAAGTGCTGTAATATCCGGTGTTCATGATCCCGCTGTCATCACAAAACCTCTGAGAGCAAGTAT GCTTGCAGCCTCACTGCAACGTGCGATGGGTGTTCGGAACAAGGGGGCTCATAGAAATAGCGATCTCCCAAGTTTGTCTCTTTGCCATCTTCTTCGTGGG AGAAGGATTTTAATTGTTGATGACAATAGTGTGAACCGCATGGTAGCGGCTGCTGCTTTGAAAAAGTATGGAGCTGAGGTGGTTTGTGTCAGCTGTGGAA AAGAGGCCATCTCTTCACTGAAGCCACCCCATCAGTTTGATGCATGTTTCATGGATATTCAAATGCCAGAAATAGATGGGTTTGAAGCTACAAGGATTAT TCGGGACATGGAAATTAGCCTGAACAGTGAAGTGTCTGTGGATGACATTGACAATGTTTCAAACTGGCATGTGCCAATTCTAGCTATGACAGCAGACGTT ATCCAGGCAACACAAGAGCAATGCCTGAGGTGTGGCATGGATGGATATGTTTCTAAACCATTTGAAGCCGAACAGCTATATATAGAAGTTTCACGGTTTT TCCAGTCATCTTGAAAAGAAAATAGGTGCTTATCTAGCTTTCCCGTCTTTACTCCAGGACACTCTGAAGTGCATTAATAGGTTCAGAAGTCTCCTAAGAG TAAGTACAAGTACATAGCATTCATCACTTAAAAGTTTGATGGTTTTTTTCTATCAGAGACTGAATAATTTTAAAGGAGTGACGAAAGGATAAAAAAAGTT GTCGAGTGCAGAAATGTTTTAATATACATTTTTGGTCTATTCCATTGTTGTCTGTGAAATTCTTAGGTGTCTGTTGCTCTATAACATTTGATGTGTATCA TGTCAGTTACATTGGCAGTGAGAGACAATAATGGCTCAACTTACATAGTATACTTCCAATGATACAGAGCAAGAGATTTTTCTTACTTTAGGGCCAATTC TGAAATTCTAGTCTTTTGTGCTATTTTTTAAGGTACTTGGTTTAAAATATTTGTTATTGTGGTAGGGAGTGTACATAGGAGCCAATTTGATTGGTTGCAA TTGAGTTTTACTTGGTAGTTAAAACTTAAGAGTATCAAATCCCTCTTATTCTTCCTTATAAAGTGTCTCTTATCTCACCCATCCTAAACCGGAGATCGAA AGTAATTGAGGGTTTTTTGTAGGTTATGGTGTCATATAGTTGTGTATACAACTTTTAAGAGTACTGTGGAGTCTAGAATAGGCATGCCACATTTTCTGTG TATTGATGTATTCATGAGAGGTTGATTCAGGTGAAAGAAGGGAAATTAGCTTCTTGGAAAC
• Tissue: pods
• Gene name: LI_gene_191754;
• Additional information: details;

Expression of Ll_transcript_487040

FPKM

• PAB: 0.1
• PNAB: 0.6
• PS1: 0.6
• PS2: 0.5
• PS3: 0
• PW1: 0.4
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_487040

• Blastp: Histidine kinase 3 from Arabidopsis with 67.38% of identity
• Blastx: Histidine kinase 3 from Arabidopsis with 67.38% of identity
• Eggnog: Histidine kinase(COG0642)
• Kegg: Link to kegg annotations (AT1G27320)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463726.1)
• Pfam: His Kinase A (phospho-acceptor) domain (PF00512.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;