| Id Trinity | TRINITY_DN52325_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_485248 |
| Sequence | CCCAACCAAACACACCTTTATTGCTTTCTGTTGCGAAGCAACCAAAAGCAGAGAATGAAATGGGAAACACATGCTATAGATATATGTTAATGCGACGCGC ACTACTACTATTACTCCTCCTCTAGCTATCGTGCACCGGTTGCGCAACCTTCTAACTTGCGCTTCTTCGCCCAATCCAAACTAACTCTAAATCACGTAAC CATTAAGTTAGAGATCTCAGATTCGAAGCGCTAAGCCATGTCGAAGGCGCGTGTCTACACCGATATCAATGTTCTTCGCCCCAAAGAGTACTGGGATTAC GAGTCTCTCACCGTTCAATGGGGTGATCAAGATGATTATGAAGTTGTGCGGAAAGTGGGAAGGGGGAAATACAGTGAGGTTTTTGAAGGCATAAATGTTA ATAGCAACGAGCGCTGTATAATCAAGATTCTGAAGCCTGTCAAGAAAAAGAAGATTAAAAGAGAGATAAAAATACTTCAGAACCTTTGTGGTGGCCCAAA TATTGTCAAGCTTCTTGATATTGTCAGAGATCAACACTCTAAAACTCCTAGCTTAATATTTGAGCATGTCAACAGTACAGATTTCAAAGTTTTGTATCCA ACCTTAACTGATTATGACATACGCTATTACATATATGAGCTCCTTAAGGCATTGGATTACTGTCACTCTCAAGGCATAATGCATAGAGATGTCAAGCCTC ATAATGTTATGATAGATCATGAACTACGAAAACTTCGCTTGATAGATTGGGGTCTTGCTGAGTTTTATCATCCTGGACAGGAATATAATGTCCGTGTGGC TTCAAGGTAATGTTTCAGACAAATCGTCACAGCCTCAACTATATCCCTAAAAGTGAAGTTATTTAAATTGACGAGCCTGAGTTTTTTAATGCATAACATC TTAAATCAAACCATGTATAAGGCATCATTAGCAATTTAAGCATGATTTCATGAAATTTTTCATTATGAATAAGGTACTGGCATTGTTGCATGCCTAGTGA TGGCATAGTAATCATTCTGAATATGTTGAACACAAACTAAGAGTGCATCACTAATACCAAGTTACCAACACAAAATCCAGCAACACTACAACTTTCTTAA CTAAAATATGGGTCGGTCTTAAATTGGTTTCTTGTTAATAGAGATGTGGCCTCTATTGCTACTAAACATAGTGTTACTTGACGTGCACAAAGTATTGTAG TAAACCAATGTATGCTTGATAAATATTTATTAAAGATCACAATATAAAATTATTCTGATCATTGTTTATATTAAGAATTTAGGATTCTCAATACCAGGCT TTTCCCCCTTCATTTCTAGCTTCTTGTAAGGAGTCTCCTATATGTTTTCTAGCTTTTAGATTCTGAGCTACATTTTTTGTTTTATCTCAGTTTCAAATTT TATAATTAATGATCAGACTTTTCTTCCAGAAGCCTGCACCTTGCAGTACACTACTTGATCCATAATCATATATTATCGAATACTTGTCCTGTACAAGATT AATGTGAGACAGTGTTGTTTTAAAAGCCATAGGCGGAGTCCTTTTTTCCTATTTATCCTTGACGCTGAAGCTACTAAACCTTATGATGCAAACATTCCTC AGCAGGTTAATACTCATTGTGTCAAAAGTGACCATGTTTTTTTTTAGATTTTTGTTAAATAACCATGTTTTTCCTCATTTTATCAACTTCTCATAAGAAA TTTAGAGGGGCATTTGAGTCTAGGACTAGCTGAAGATATTGAAACTTGGAAGCTCCAAAGCCAGTCATTCATTGCGTGCAGGAAGGCTTTTAAAGCAAAA CAGGGTTTTCAAGAGCTTTTGGCTTGGATGAAGTACTATTTTGAGGTTTTCATGTGCGTTTGGTGGCATTCTGCCTTTTGTCTCCCAGGCATATTCTTTT CTGTCATTTGCAGCCAAAACATCCTTGTGCCTTCTTTCTGGTTCCTCTTAAACTTATTTCAACTCTTATTAGTAGCATGTTTCAAGGTCCTAGTCTTCCA TTAAACTTTAGTCCTTCAGACACTCTTTCCTTTTTTTAGGGCAGCATTAATTTTTTGGCACGATTCCCTTTATGCAGTGCCTTTTTTAAATTCTAATCAA GTTTGATTTTCCTCTTTCCATTTTGACACATGGGACCCTTTTATTCCTTTGTCCTCCATGTTCCCTATCATCTGCTAGAAGAAAAAGCATATCATGAAAA CTTCCCTCTACCTTGCGTCACCATCAGTCTTGCAAAATTTTCAATTGCAAATTCAATTGCTCAAGACTGAGGAAATAGAAGGGAACTCCTCAAAATGAAT GATAAGTGTGTACTGCACAACCCAATGCTGATCTAGAACCTATATATACCACATAATAGATTGGAGTTGAACAGAATGGTGAACAACTAAAATGACTGCA AGAATTTAAGCCATTGGAAGGGTGTCTTGGAGCGACCCCCAAACCACCATGTTTCACAAGCAATATACTGGAATGAAAATGTCAAAGAGTGAGAATGAAA ATTACTTTTAAGAATCGAGTAGAGAAATAAAATAGGAAATGTTTTTCTAAAACAAGGGTACCCTTAAATTTTCCCAGACTTTATAGTATTGCAATGTTGG GATGAGTTCTTGTTTCTTGGGTTCTTAAACGTCACTGAAAACAATTACATGTACTTATGCTTTGCTTTTCAGATACTTTAAAGGCCCTGAACTTCTAGTT GATTTGCAAGACTATGATTACTCGTTAGATATGTGGAGCCTTGGCTGCATGTTTGCTGGAATGATATTTCGCAAGGAACCTTTCTTTTATGGTCATGACA ACCATGATCAACTTGTCAAAATAGCAAAGGTGCTTGGGACTGATGAACTGAATGCATATCTGAATAAGTATCATTTGGAGCTTGATCCCCAACTTGATGC ACAAGTAGGAAGGCATAGCCGCAAGCCCTGGTCTAAATTTACCAATTCAGATAATCAGCATCTTGTTTCTCCAGAGGCCATTGATTTTCTTGATAAGCTC CTTCGATATGATCACCAGGACAGGCTAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_191777; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_485248
| Blastp | Casein kinase II subunit alpha from Zea with 95.26% of identity |
|---|---|
| Blastx | Casein kinase II subunit alpha-1 from Arabidopsis with 82.38% of identity |
| Eggnog | Casein Kinase(ENOG410XNPP) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (NP_001242864.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |