Ll_transcript_485241

• Id Trinity: TRINITY_DN52325_c0_g1_i4
• Name Transcript: Ll_transcript_485241
• Sequence: TCTTACCATTCCTATAAAAAAGAGATAAATGTAATAAAAAAAACATGTATAAATGTAATAACCTTTGCACACGCTTTAAATATGCGCACGAACCACCAGC ATTTCTCCGCTTCTTGCTACTGTGCACCCTTGTCGCCTTTCGTGCACCGGTTGCGCAACCTCCTATCCTGCGCACACCCACCCACCCTATCAACGACACT ACTATTCTGCACCGCCACCGTGTCCAGATCTTAGGTTCTAACCGCTCAACCATGTCAAAGGCGCGTGTCTACACCGACATCAATGTTCTTCGTCCCAAAG AATATTGGGACTACGAATCTCTCACCGTTCAATGGGGTGATCAGGATGATTATGAGGTTGTACGAAAAGTGGGACGGGGGAAGTATAGTGAGGTTTTCGA AGGCATAAATGTTAATAGCAATGAGCGCTGTGTAATCAAGATTCTCAAGCCTGTCAAGAAAAAGAAGATTAAAAGAGAGATAAAAATACTTCAGAACCTT TGTGGTGGCCCAAATATTGTCAAGCTTCTTGATATTGTCAGAGATCAACACTCTAAAACTCCTAGCTTAATATTTGAGCATGTCAACAGTACAGATTTCA AAGTTTTGTATCCAACCTTAACTGATTATGACATACGCTATTACATATATGAGCTCCTTAAGGCATTGGATTACTGTCACTCTCAAGGCATAATGCATAG AGATGTCAAGCCTCATAATGTTATGATAGATCATGAACTACGAAAACTTCGCTTGATAGATTGGGGTCTTGCTGAGTTTTATCATCCTGGACAGGAATAT AATGTCCGTGTGGCTTCAAGGTAATGTTTCAGACAAATCGTCACAGCCTCAACTATATCCCTAAAAGTGAAGTTATTTAAATTGACGAGCCTGAGTTTTT TAATGCATAACATCTTAAATCAAACCATGTATAAGGCATCATTAGCAATTTAAGCATGATTTCATGAAATTTTTCATTATGAATAAGGTACTGGCATTGT TGCATGCCTAGTGATGGCATAGTAATCATTCTGAATATGTTGAACACAAACTAAGAGTGCATCACTAATACCAAGTTACCAACACAAAATCCAGCAACAC TACAACTTTCTTAACTAAAATATGGGTCGGTCTTAAATTGGTTTCTTGTTAATAGAGATGTGGCCTCTATTGCTACTAAACATAGTGTTACTTGACGTGC ACAAAGTATTGTAGTAAACCAATGTATGCTTGATAAATATTTATTAAAGATCACAATATAAAATTATTCTGATCATTGTTTATATTAAGAATTTAGGATT CTCAATACCAGGCTTTTCCCCCTTCATTTCTAGCTTCTTGTAAGGAGTCTCCTATATGTTTTCTAGCTTTTAGATTCTGAGCTACATTTTTTGTTTTATC TCAGTTTCAAATTTTATAATTAATGATCAGACTTTTCTTCCAGAAGCCTGCACCTTGCAGTACACTACTTGATCCATAATCATATATTATCGAATACTTG TCCTGTACAAGATTAATGTGAGACAGTGTTGTTTTAAAAGCCATAGGCGGAGTCCTTTTTTCCTATTTATCCTTGACGCTGAAGCTACTAAACCTTATGA TGCAAACATTCCTCAGCAGGTTAATACTCATTGTGTCAAAAGTGACCATGTTTTTTTTTAGATTTTTGTTAAATAACCATGTTTTTCCTCATTTTATCAA CTTCTCATAAGAAATTTAGAGGGGCATTTGAGTCTAGGACTAGCTGAAGATATTGAAACTTGGAAGCTCCAAAGCCAGTCATTCATTGCGTGCAGGAAGG CTTTTAAAGCAAAACAGGGTTTTCAAGAGCTTTTGGCTTGGATGAAGTACTATTTTGAGGTTTTCATGTGCGTTTGGTGGCATTCTGCCTTTTGTCTCCC AGGCATATTCTTTTCTGTCATTTGCAGCCAAAACATCCTTGTGCCTTCTTTCTGGTTCCTCTTAAACTTATTTCAACTCTTATTAGTAGCATGTTTCAAG GTCCTAGTCTTCCATTAAACTTTAGTCCTTCAGACACTCTTTCCTTTTTTTAGGGCAGCATTAATTTTTTGGCACGATTCCCTTTATGCAGTGCCTTTTT TAAATTCTAATCAAGTTTGATTTTCCTCTTTCCATTTTGACACATGGGACCCTTTTATTCCTTTGTCCTCCATGTTCCCTATCATCTGCTAGAAGAAAAA GCATATCATGAAAACTTCCCTCTACCTTGCGTCACCATCAGTCTTGCAAAATTTTCAATTGCAAATTCAATTGCTCAAGACTGAGGAAATAGAAGGGAAC TCCTCAAAATGAATGATAAGTGTGTACTGCACAACCCAATGCTGATCTAGAACCTATATATACCACATAATAGATTGGAGTTGAACAGAATGGTGAACAA CTAAAATGACTGCAAGAATTTAAGCCATTGGAAGGGTGTCTTGGAGCGACCCCCAAACCACCATGTTTCACAAGCAATATACTGGAATGAAAATGTCAAA GAGTGAGAATGAAAATTACTTTTAAGAATCGAGTAGAGAAATAAAATAGGAAATGTTTTTCTAAAACAAGGGTACCCTTAAATTTTCCCAGACTTTATAG TATTGCAATGTTGGGATGAGTTCTTGTTTCTTGGGTTCTTAAACGTCACTGAAAACAATTACATGTACTTATGCTTTGCTTTTCAGATACTTTAAAGGCC CTGAACTTCTAGTTGATTTGCAAGACTATGATTACTCGTTAGATATGTGGAGCCTTGGCTGCATGTTTGCTGGAATGATATTTCGCAAGGAACCTTTCTT TTATGGTCATGACAACCACGACCAGCTTGTAAAAATAGCAAAGGTGCTTGGGACAGACGAACTGAATGCATATTTGAATAAATATCATCTGGAGCTTGAT CCTCAACTTGATTCACTTGTTGGAAGGCACAGTCGCAAGCCCTGGTCTAAATTTATCAATGCAGATAATCAGCATCTCGTGTCTCCCGAGGCAGTTGATT TTCTTGATAAGCTCCTTCGATATGATCACCAGGACAGGCTAACAGCTAAAGAAGCAATGGCACATCCATATTTCTCTCATGTAAGGGCAGCAGAAAGTAG CAGAATGAGGACTCAGTAGTTGTCATATGGGGAACCTTAAACGTGAGTTCATATGTTTGAGATTGTTTCATATTACTTTAACATGCGCCTTGATTACCAT CTGTGCTGTGTAATAGTACCATGTTTGTCTCAGTAGAGGAATAATGTTACTGTCTGTTGTTTGAAACTTGGAACTTATTTTATGCCTTGAAAGTTTTGAC TTAAATGATTCAAAGTGGTAAGGTTTTCTCTGAAAAA
• Tissue: pods
• Gene name: LI_gene_191777;
• Additional information: details;

Expression of Ll_transcript_485241

FPKM

• PAB: 0
• PNAB: 2
• PS1: 4.2
• PS2: 5.4
• PS3: 5.3
• PW1: 3.2
• PW2: 3.6
• PW3: 4.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485241

• Blastp: Casein kinase II subunit alpha-1 from Arabidopsis with 91.94% of identity
• Blastx: Casein kinase II subunit alpha-1 from Arabidopsis with 81.7% of identity
• Eggnog: Casein Kinase(ENOG410XNPP)
• Kegg: Link to kegg annotations (AT5G67380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_017436991.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;