Id Trinity | TRINITY_DN52328_c2_g1_i3 |
---|---|
Name Transcript | Ll_transcript_485455 |
Sequence | TTATGGCACACCATAGCATAGCAGTGTACACTGTTATTATTATTATTTTGGTTACAGTCTACACTGTTATTCACTGTGGCCTCAAATTTAATGGCATGTC CCCATTACCTTAAGTTTAATATTTATATATCTTTACCGTAAAGATTTATATACAATCATTATATAGTCTATTATTCATTTATATTATTATTAAACATGAA GAACAAATAATATAATAATAATAATGCAAATATCTTTTTCTATTACCTTAATGGTTAAAGGAGGGAGAAAGAAGGATAAGAATTTGTACAAAAATAAAAA AAGTTGGGTTAGAGAGAGAAACAAAGAGTGATAGAGATATGTGGTGCAGTGTTGCAGGTTAGTTGCAGAAGTTGTGGCAGATGGTGTTTTAACTTTTGTG TCAAAGAGTTTTCTTCTTCTCTCTCTATATTCATCTATCTATCTTCTTCACTTTTGCATCTTACACTTGAATTAAGAGAGTAGTCTTTGTGTGCCAGAAT GATGTGATTGAATAGAATTGCTTTAGCTAAAGCTATAAGCTAGTTCTGTTACATATCAGAACAGTATTAATCACATAAAAAGCTAAAATACTCAGAAGAA TAGTCTCAAATTATGCTCAGTGATGCCTTGTAGCACTGTTATTAAAGAACAACAATAACAACAACACCCTTTTCTTCTTTCTTCTTCTTCTTGTTCCTTT GTGCATGTACAAGATGTTTTAGAAAGAGCTTACTTGGGTTTTCAAATTGTGGAGTTTGAGTTGAAGTTGCAGCTATGGCATTTCAATTTGTGGTCCTTGT TCTAGCTTTTCTCATTTGTTGGAATGCCAATATGGTGGAATCAAATGATGGAACAACATTGCTAGAGATAAAGAAGTCATTCAGGGATGTAGATAATGTT CTGTATGATTGGACAGATTCACCATCATCAGATTATTGTGTGTGGAGAGGGGTCTCATGTGATAATGTTACCTTCAATGTTGTTGCACTCAACCTTTCAG GATTGAATCTTGACGGTGAAATTTCGCCCGCAATCGGGAGCCTTACGAGCTTGGTCTCTATTGACCTTAAAGAAAACCGTCTATCGGGCCAGATACCGGA TGAGATTGGTGACTGTTCTTCTCTGAAAAGCTTGGACTTATCATTCAATCAGATAAGAGGAGATATACCATTTTCAATTTCTAAGTTGAAGCAACTGGAA AATCTGATTTTGAAAAACAACCACTTAATTGGACCGATACCTTCAACTTTGTCTCAGATTCCTAACTTGAAGATTCTAGACCTGGCACAAAATAATCTTA GCGGTGAAATACCGAGGCTTATATACTGGAACGAAGTTTTGCAGTATCTTGGCTTGCGAGGAAACAATTTGGTAGGTTCACTATCATCAGACATGTGCCA GTTAACTGGATTGTGGTATTTTGATGTGAAAAACAATAGTTTGACCGGAAGTATTCCTGAAAGCATAAGCAACTGTACTGGCTTCCAGGTCTTGGATCTA TCTTACAACCAGTTAACTGGAGAGATACCATACAACATTGGATTTTTACAAGTGGCAACATTGTCGTTGCAAGGCAATAAACTCTCTGGCCATATTCCAC CGGTGATCGGTCTCATGCAAGCACTTGCTGTCTTAGACTTGAGTTGCAACATGTTAAGTGGACCAATCCCTTCCATTTTGGGAAATTTATCTTACACGGA AAAAATGTATTTGCATGGTAACAAGCTGACTGGCTTCATACCCCCGGAGCTTGGAAATATGTCAAAACTTCACTATTTGGAACTGAACAATAACCATCTA AGTGGACGTATCCCACCCGAACTGGGAAAGCTTACTGATCTGTTTGACTTAAATGTTGCTAACAACAACCTTGAGGGGCCAATTCCTGATAACCTTAGTT CATGTAAAAATCTTAACAGCCTCAATGTGCATGGGAATAAGTTGAGTGGAACAATTCCTCCTGCTTTGCAGAGTTTGGAAAGTATGACCTATTTGAATTT GTCATCCAACAATCTTCAAGGACCCATTCCAATTGAACTGTCTCGGATCGGTAATTTGGATACATTGGATATATCAAATAATAATATAGTTGGCTCCATT CCTTCTTCGCTCGGTGACTTGGAACATCTTCTGAAGCTGAATCTGAGCCGAAATCATATAAGAGGAGTAATTCCAGCTGAATTCGGTAATCTTAGAAGTG TTATGGATATTGATCTTTCAAACAATCAACTCTCTGGCATGATACCTAATGAACTTAGTCAGATTCAGAACATGATATACTTGAGGCTTGAGAACAACAA ATTAACCGGGGATGTATCATCACTTGTAGATTGCCTTAGCCTTTCTTTGCTTAATGTGTCATATAATGAACTAGTCGGTGTTATTCCCACAAGCAACAAT TTTTCCAGGTTCCACTTTGACAGTTTCATTGGCAATCCCGGTCTTTGTGGCAATTGGCCGAATTTGCCCTGTCATAGCTCTCAACCTACAAAGCGAGTTA TATTACCTAAGGCAGCAATTCTTGGAATTACACTTGGTGCCCTTGTAATTCTTCTTATGATATTACTGGCAGCTTGTCGACCACAAAATCCATCACCTTT TCTTGATGGACCACTTGACAAACCAGTTAAGTACTCACCTCCAAAGCTTGTGATTCTTCATATGAATATGGCGCTTCATGTGTATGATGATATCATGAGG ATGACTGAAAATCTGAGTGAGAAGTATATAATTGGATATGGTGCATCAAGTACTGTTTACAAATGTGTTCTTAAAAATTGCAAGCCGATTGCTATCAAGA GGCTCTATTCTCACTATCCACAATGCTTGAAAGAATTTGAGACCGAACTTGAGACAGTTGGCAGCATTAAGCACCGGAATCTGGTCAGTCTCCAAGGCTA CTCTTTGTCCCCATATGGGCACCTTCTCTTTTATGACTACATGGAAAATGGCAGTCTGTGGGATCTTCTTCATGGAGCTACAAAGAAGAAAAAGCTTGAC TGGGATCTGCGTCTACAAATAGCACTCGGAGCTGCCCAAGGGCTTGCTTATCTACACCATGATTGCTGTCCTCGTATTATCCACAGGGATGTTAAATCAT CTAATATTTTATTAGACACAGACTTTGAGCCTCATCTCACTGATTTTGGCATTGCCAAAAGTCTCTGCCCTTCAAAGTCCCATACTTCAACTTTCATAAT GGGCACAATTGGTTACATAGACCCTGAGTACGCTAGAACTTCCCGGCTCACCGAGAAGTCTGATGTGTACAGCTATGGTGTTGTGCTACTTGAGTTGCTA ACAGGGAGGAAAGCTGTTGACAATGAATCCAACCTCCATCATCTGGTCAATTTTCTACCAGTCTTACTTAATACATTTCATTTCACTGATTTATAAATAT CAATAGCTTTGAGTTATGATCAATTTTCTACCCATTTTCAATACATTCATCTTCCGGAAATCCGGATTTATAAAGATCATAAGCTTTATGTTGGAGTATA TATTTCTGGTTGTATAACTTAGGCCTTGCATGGGCTAGGTGTGTGGATATTTTGGCCAAGCCATTGAGTCCTTTTCCCTTCTCTTCAAACCTCAAATACT CATTGTTTGGATATAATATTGGCTGGCTCATGAATTAACACTGCAACTCTGATTTGCATCCATATCAATCTAAACTTCTTGTTAATACTTCATCCAATGG TTGTTTTGATTTTTGAATTTGTATGAGCCTTTACAATTGCAAGCTTATTTACATTGTTTCACATCTACCTCAGATAATTACAAACTCATGTCATTTTTTT ATTTGTGTAGATTTTGTCCAAGACAGCAAGTAATGCCGTAATGGAGACTGTCGATCCGGACATTACTGCCACTTGCAAGGACATGGGAGCAGTGAAAAAA GTTTATCAGCTTGCTCTATTATGCACAAAGAGGCAACCAGTTGATAGGCCCACAATGCATGAAGTGACTAGAGTGCTGGGAAGTCTGGTGCCATCTACCA CCCCACCACCGAAACAATCGGCTCCAATACCACTTGCTTCACATCAATCTACCAAAGTGCCATGCTACAAGGATGAGTATGCAAATCTCAAGACTCCACA CTTGGTGAACTGTCCTTCTATGAGCACCTCTGATGCGCAGCTCTTCCTTAAGTTTGGAGAGGTAATCTCTCAGAACAGTGAGTGACTGAATGAGGATATT GAAATAATCATATTAAGAATCATGTATATTTGATCTTAGAAAGTAAAAAAAATGGGAGGTTAAGGTTTAAATGGAACAAAAATGTGTATAAGAATTTTAG TATTTAGTTTTAGACTTTTAGTGATGTTTGTAACAAGAAAGATATGCCACTTTAATGCAATTTGAAAGGTGCAGTAACTGAATTCTTGTACTGGATTGTT TGGTAGCTAACAAGGTTGCAGTAGTGAAAGTTAAGTTAAGGCTCTGGGGCCAATGGTTCAGGGTGGGGTAGCTACCCTTTAATGCTAAGGGAAAGAAGCA GTGCCTAATGTATGAACATCAATAATGCACTGATTCTCTTAGCTGGCCTGAATCAGTAATTTGTCTGAATGCTACAAGTATTCTCAGTGGGAGTAACTAT TGCATTCTTGTACTGCTTCATGCTATTCGATATGTAAATGCAATGCTATGTAGTTATTATATCATGAAATTTAGGGTCATTGGTACCCATAAATGAATTC AAAATAGGCCATTGGGTATTTG BLAST |
Tissue | pods |
Gene name | LI_gene_191805; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_485455
Blastp | LRR receptor-like serine/threonine-protein kinase ERECTA from Arabidopsis with 81.61% of identity |
---|---|
Blastx | LRR receptor-like serine/threonine-protein kinase ERECTA from Arabidopsis with 81.61% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT2G26330) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458491.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |