Ll_transcript_485142

• Id Trinity: TRINITY_DN52329_c0_g1_i1
• Name Transcript: Ll_transcript_485142
• Sequence: CACCTAACACACTCTATAACAACTCTTCTCTGTTATTTCCTTACACATTATATTCAGTTAGCAATAGAAGGATCTAGAACTATAAAATACACCTAACACG CTCTATATAACTCAATTCTCATTCTCCATTTTCACTCATTCTTCATTTTCTCTCATTCTTCATTTTCTCTATCACCTCACAAACCCTAATTTCTCATATT ACAATGGCGGATACCGAGACCTTCGCTTTTCAGGCTGAGATCAACCAGCTTCTCAGTCTAATCATCAACACCTTCTACAGCAACAAGGAAATTTTCCTTC GTGAGATCATCAGTAATGCGTCTGACGCTTTGGACAAGATCCGATTTGAGAGCCTTACCGACAAGAGCAAGCTCGATGCTCAGCCAGAGTTATTCATCCA CCTCGTCCCTGACAAGACCAACAACTCGTTGTCCATCATTGACAGTGGTATTGGCATGACTAAAGCAGGTAAGATAGCACTGTTTTTAATCTTAGTCATA TCAGTTTGCGTTGCCTGAAATAATTGTATATGTTAATTGATGTAATATGTTATAACTAATGTTTTTTGTGCTCAATGTTTTCCAGATTTGGTTAATAACT TGGGTACAATTGCAAGGTCTGGGACCAAGGAATTCATGGAAGCTCTGGCAGCGGGTGCTGACGTGAGCATGATTGGACAGTTCGGTGTTGGGTTCTACTC AGCTTATCTAGCTGCTGACAAGGTTATTGTTACCACAAAGCACAATGATGACGAGCAGTATGTTTGGGAGTCCCAAGCCGGGGGGTCATTC
• Tissue: pods
• Gene name: LI_gene_191808;
• Additional information: details;

Expression of Ll_transcript_485142

FPKM

• PAB: 1
• PNAB: 0.7
• PS1: 0.1
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485142

• Blastp: Heat shock protein 90-4 from Arabidopsis with 90.91% of identity
• Blastx: Heat shock protein 90-3 from Arabidopsis with 75% of identity
• Eggnog: Molecular chaperone. Has ATPase activity (By similarity)(COG0326)
• Kegg: Link to kegg annotations (AT5G56000)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435703.1)
• Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (PF02518.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;