| Id Trinity | TRINITY_DN52329_c3_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_485159 |
| Sequence | CTGATGTCAGCATGATTGGACAATTTGGTGTTGGGTTCTACTCTGCATATCTAGTTGCTGATAAGGTTATTGTTACGACTAAGCATAACGATGATGAGCA GTATGTATGGGAGTCGCAAGCTGGTGGTTCATTCACTGTTACAAGGGATACATCCGGTGAGAATCTTGGCAGGGGAACTAAGATTACTCTCTACTTGAAG GAGGACCAGCTTGAGTACCTTGAGGAGCGCCGTCTCAAGGACTTGGTCAAGAAGCATTCCGAGTTCATCAGCTACCCAATTTCACTTTGGGTTGAGAAGA CCACGGAGAAGGAGATCTCTGATGATGAGGATGAGGAAGAGAAGAAGGATGAGGAGGGTAAAGTGGAGGATGTTGACGAAGAAAAAGAGAAGGATGAGAA GAAGAAAAAGACAATTAAGGAGGTGTCACGTGAATGGGACCTGGTTAACAAGCAGAAGCCTATTTGGATGAGGAAGCCTGAAGAGATAACAAAAGAAGAG TATGCTGCTTTCTATAAGAGTCTTACCAATGACTGGGAAGAGCATTTGTCTGTCAAACACTTCTCTGTTGAGGGTCAGTTGGAGTTTAAGGCTATTCTCT TTGTACCTAAGAGGGCACCTTTCGATCTCTTTGACACAAGGAAGAAACCCAACAACATCAAGCTCTACGTTCGTCGTGTCTTCATCATGGACAACTGTGA GGAGTTGATCCCTGAGTATCTTGGCTTTGTCAAGGGTATTGTGGATTCTGAAGATCTTCCACTTAACATTTCTAGAGAAACGTTGCAGCAGAACAAGATC CTGAAGGTCATTCGCAAGAACTTGGTGAAAAAGTGCCTTGAGATGTTCTTTGAAATTGCTGAGAACAAGGAGGACTACACCAAGTTCTATGAGTCTTTCT CCAAAAACTTGAAACTCGGGATTCATGAGGATTCCTCCAACAAGGCCAAGATTGCTGAGTTGCTCAGGTACCATTCTACCAAGAGTGGTGATGAGCAGAC CAGCCTCAAGGACTATGTGACCCGGATGAAGGAAGGACAGAGTGATATCTACTATATCACTGGTGAAAGCAAGAAAGCTGTTGAAAATTCTCCTTTCCTG GAGAAGTTGAAGAAGAAGGGGTATGAGGTACTGTACATGGTTGACGCCATTGATGAGTATGCTGTTGGCCAGCTGAAGGAATTTGAGGGCAAAAAGTTGG TATCTGCTACCAAGGAGGGTCTGAAACTTGAGGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAACTGAAGGAGAAATTTGACGGTCTCTGCAAAGTGAT CAAGGATGTCTTGGGTGACAAGGTGGAGAAAGTTGTGTTATCTGACCGTGTTGTTGATTCACCATGCTGTCTTGTGACCGGTGAATATGGATGGACTGCT AATATGGAAAGGATTATGAAGGCTCAGGCATTGAGGGATAGCAGCATGGCTGGGTACATGTCAAGCAAGAAGACACTGGAGATCAACCCTGAGAATGCCA TCATGGAGGAGCTGAGGAAGAGAGCTGATGCTGACAAGAATGACAAATCTGTGAAAGACCTTGTTCTCCTGCTGTTTGAGACTGCTCTCCTCACTTCTGG GTTTAGCCTTGATGAACCTAGCACTTTTGGGAACAGAATTCACAGGATGCTGAAGCTTGGACTGAGCATTGATGAGGATGATGCCGGTGAGGTGGATGCT GACATTCCAACATCGGAGGAAGTTGATGCTGAAGGAAGCAAGATGGAGGAAGTTGATTAAATCTAACTGAGCTTGTTTTTTATCATTAGCAACTAGTAGG AATGCGGGCTGTATCTTTTTGGTGTTTTTATTTTCTTATTTTCGATTGATGACAGTAAACGCATTAAGTTTAGTTTTTTGTTATCATCCTGATGCAGTAA ATGTTGTCATTGTTTTTTAGCTAATTTTACTTCTGCCGTTTTCTGATTGCTTTTAGATGAGAAGACATATTACGGTTTTAATATCACCACAATATGGATG TGGCCTTTTTTAAAAGTTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_191811; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_485159
| Blastp | Heat shock cognate protein 80 from Lycopersicon with 91.48% of identity |
|---|---|
| Blastx | Heat shock cognate protein 80 from Lycopersicon with 91.48% of identity |
| Eggnog | Molecular chaperone. Has ATPase activity (By similarity)(COG0326) |
| Kegg | Link to kegg annotations (543903) |
| CantataDB | Link to cantataDB annotations (CNT0000451) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_016165901.1) |
| Pfam | Hsp90 protein (PF00183.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |