Ll_transcript_485161

• Id Trinity: TRINITY_DN52329_c3_g1_i12
• Name Transcript: Ll_transcript_485161
• Sequence: GATGAGCAGTATGTATGGGAGTCACAAGCTGGTGGGTCATTCACCGTTACAAGGGATACATCCGGTGAGAGTCTCGGCCGGGGTACTAAGATGACTCTCT ACTTGAAGGAGGACCAGCTTGAGTACCTTGAGGAGCGCCGTCTCAAGGACTTGGTCAAGAAGCATTCCGAGTTCATCAGCTACCCAATTTCACTTTGGGT TGAGAAGACCACGGAGAAGGAGATCTCTGATGATGAGGATGAGGAAGAGAAGAAGGATGAGGAGGGTAAAGTGGAGGATGTTGACGAAGAAAAAGAGAAG GATGAGAAGAAGAAAAAGACAATTAAGGAGGTGTCACGTGAATGGGACCTGGTTAACAAGCAGAAGCCTATTTGGATGAGGAAGCCTGAAGAGATAACAA AAGAAGAGTATGCTGCTTTCTATAAGAGTCTTACCAATGACTGGGAAGAGCATTTGTCTGTCAAACACTTCTCTGTTGAGGGTCAGTTGGAGTTTAAGGC TATTCTCTTTGTACCTAAGAGGGCACCTTTCGATCTCTTTGACACAAGGAAGAAACCCAACAACATCAAGCTCTACGTTCGTCGTGTCTTCATCATGGAC AACTGTGAGGAGTTGATCCCTGAGTATCTTGGCTTTGTCAAGGGTATTGTGGATTCTGAAGATCTTCCACTCAACATTTCTAGAGAAACACTCCAGCAGA ACAAGATCCTGAAGGTCATCCGCAAGAACTTGGTGAAAAAGTGCCTTGAGTTGTTCTTTGAAATTGCTGAGAACAAGGAGGACTACAACAAGTTCTATGA GGCTTTCTCCAAGAACTTGAAACTGGGAATTCACGAGGATTCCTCCAACAAGGCCAAGATTGCTGAGTTGCTCAGGTACCACTCTACCAAGAGCGGTGAT GAGCAGACCAGTCTCAAGGACTATGTTACTCGCATGAAGGAAGGTCAGAGTGACATCTACTACATTACTGGTGAAAGCAAGAAAGCTGTCGAGAATTCTC CCTTCCTGGAGAAGTTGAAGAAGAAGGGGTATGAAGTACTCTACATGGTTGACGCCATTGATGAGTATGCTGTTGGCCAGCTCAAGGAATTTGAAGGCAA GAAGTTGGTGTCTGCTACTAAGGAAGGTCTGAAACTCGAGGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAATTGAAGGAGAAATTTGACGGTCTCTGC AAAGTGATCAAGGATGTCTTGGGTGACAAGGTGGAGAAGGTTGTGGTATCTGACCGCATTGTTGATTCACCATGCTGTCTTGTGACCGGTGAATATGGAT GGACCGCTAACATGGAAAGGATTATGAAAGCTCAGGCATTGAGGGATAGCAGCATGGCTGGGTACATGTCAAGCAAGAAGACATTGGAGATCAACCCTGA GAATGCCATCATTGACGAGCTGAGGAAGCGTGCTGATGCTGATAAGAATGACAAATCTGTGAAGGACCTTGTCCTCTTGCTCTTTGAGACCGCTCTTCTC ACTTCTGGGTTTAGCCTCGACGAACCCAACACTTTCGGTAACAGAAGTCACAGGATGCTGAAGCTTGGACTCAGTATT
• Tissue: pods
• Gene name: LI_gene_191811;
• Additional information: details;

Expression of Ll_transcript_485161

FPKM

• PAB: 0.3
• PNAB: 63.7
• PS1: 55.5
• PS2: 38.5
• PS3: 29.3
• PW1: 36.5
• PW2: 32.9
• PW3: 25.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485161

• Blastp: Heat shock protein 90-2 from Arabidopsis with 93.54% of identity
• Blastx: Heat shock cognate protein 80 from Lycopersicon with 93.54% of identity
• Eggnog: Molecular chaperone. Has ATPase activity (By similarity)(COG0326)
• Kegg: Link to kegg annotations (AT5G56030)
• CantataDB: Link to cantataDB annotations (CNT0000451)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447045.1)
• Pfam: Hsp90 protein (PF00183.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;