Ll_transcript_485162

• Id Trinity: TRINITY_DN52329_c3_g1_i13
• Name Transcript: Ll_transcript_485162
• Sequence: CTGATGTCAGCATGATTGGACAATTTGGTGTTGGGTTCTACTCTGCATATCTAGTTGCTGATAAGGTTATTGTTACGACTAAGCATAACGATGATGAGCA GTATGTATGGGAGTCGCAAGCTGGTGGTTCATTCACTGTTACAAGGGATACATCCGGTGAGAATCTTGGCAGGGGAACTAAGATTACTCTCTACTTGAAG GAGGACCAGCTTGAGTACCTTGAGGAGCGCCGTCTCAAGGACTTGGTCAAGAAGCATTCCGAGTTCATCAGCTACCCAATTTCACTTTGGGTTGAGAAGA CCACGGAGAAGGAGATCTCTGATGATGAGGATGAGGAAGAGAAGAAGGATGAGGAGGGTAAAGTGGAGGATGTTGACGAAGAAAAAGAGAAGGATGAGAA GAAGAAAAAGACAATTAAGGAGGTGTCACGTGAATGGGACCTGGTTAACAAGCAGAAGCCTATTTGGATGAGGAAGCCTGAAGAGATAACAAAAGAAGAG TATGCTGCTTTCTATAAGAGTCTTACCAATGACTGGGAAGAGCATTTGTCTGTCAAACACTTCTCTGTTGAGGGTCAGTTGGAGTTTAAGGCTATTCTCT TTGTACCTAAGAGGGCACCTTTCGATCTCTTTGACACAAGGAAGAAACCCAACAACATCAAGCTCTACGTTCGTCGTGTCTTCATCATGGACAACTGTGA GGAGTTGATCCCTGAGTATCTTGGCTTTGTCAAGGGTATTGTGGATTCTGAAGATCTTCCACTTAACATTTCTAGAGAAACGTTGCAGCAGAACAAGATC CTGAAGGTCATTCGCAAGAACTTGGTGAAAAAGTGCCTTGAGATGTTCTTTGAAATTGCTGAGAACAAGGAGGACTACACCAAGTTCTATGAGTCTTTCT CCAAAAACTTGAAACTCGGGATTCATGAGGATTCCTCCAACAAGGCCAAGATTGCTGAGTTGCTCAGGTACCATTCTACCAAGAGTGGTGATGAGCAGAC CAGCCTCAAGGACTATGTGACCCGGATGAAGGAAGGACAGAGTGATATCTACTATATCACTGGTGAAAGCAAGAAAGCTGTTGAAAATTCTCCTTTCCTG GAGAAGTTGAAGAAGAAGGGCTATGAGGTACTCTACATGGTTGATGCCATTGATGAGTATGCTGTTGGCCAGCTCAAGGAATTTGAGGGCAAGAAGTTGG TATCTGCTACCAAGGAAGGTCTAAAACTTGAGGAGAGTGAGGATGAGAAGAAAAAACAGGAAGAACTGAAGGGAAAATTTGATGGTCTCTGCAAGGTGAT CAAGGATGTCTTGGGTGACAAGGTGGAGAAAGTTGTGGTGTCGGACCGTGTTGTCGATTCACCATGCTGTCTCGTGACTGGTGAATATGGATGGACTGCT AACATGGAAAGGATCATGAAAGCTCAGGCATTGAGGGATAGCAGCATGGCTGGGTACATGTCAAGCAAGAAGACAATGGAGATCAATCCTGAGAATGCCA TCATGGAGGAGCTGAGGAAGCGAGCTGACGCCGACAAGAATGACAAATCTGTGAAGGATCTTGTGCTTCTGCTTTTTGAGACTGCTCTACTGACTTCTGG GTTTAGCCTTGACGAACCCAACACTTTTGGTAATAGAATTCACAGGATGTTGAAGCTTGGACTGAGCATTGATGAGGATGCTGGTGAGGTAGATGCTGAC ATGCCCCCATTGGAGGATGCTGATGCTGATGCTGATGCTGAGGGCAGCAAGATGGAGGAAGTTGATTAATTCCACAGAACTTGTTTTTATTATTAGTCAA ACTAATGCAGTGTCTTTACGTTTTGCTATGTTTTTCCTTTCTTATTTTGGACTACGATAGTATTTAAATGCATCAAGTTTTTCAATCATCCTGATTCAGT TTCTGGCGTATTCTGATTGCTTTCTGGAGGATATCCCAACATAGTACGGTTTTAAAAGGTGAAAGAGAAAATGGAACGCTTGAACCTTTTTCATCATTAA TTCGTATATAATTTGTTAAAGGTTTTACTGCCATATGATAGCCATAGATTAGGTGTCTACAAGTATTAGATGGCTCTAGCAGAAATTAGATGGTGGGTTG CTTGACCAAATTTTGCTTAATGCTATATGTCTACATATTTCTATAATTAGGCCTTTTTTCTATCGCATTTGCAATGAAACGGCA
• Tissue: pods
• Gene name: LI_gene_191811;
• Additional information: details;

Expression of Ll_transcript_485162

FPKM

• PAB: 26.3
• PNAB: 112.8
• PS1: 80.7
• PS2: 57.6
• PS3: 55.3
• PW1: 74.6
• PW2: 51.2
• PW3: 48

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485162

• Blastp: Heat shock cognate protein 80 from Lycopersicon with 92.18% of identity
• Blastx: Heat shock cognate protein 80 from Lycopersicon with 92.18% of identity
• Eggnog: Molecular chaperone. Has ATPase activity (By similarity)(COG0326)
• Kegg: Link to kegg annotations (543903)
• CantataDB: Link to cantataDB annotations (CNT0000451)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020234322.1)
• Pfam: Hsp90 protein (PF00183.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;