Ll_transcript_485152

• Id Trinity: TRINITY_DN52329_c3_g1_i3
• Name Transcript: Ll_transcript_485152
• Sequence: CTACTCTGCATATCTAGTTGCTGATAAGGTTATTGTTACGACTAAGCATAACGATGATGAGCAGTATGTATGGGAGTCACAAGCTGGTGGGTCATTCACT GTTACAAGAGATACATCTGGTGAGAATCTTGGAAGGGGAACTAAGATTACTCTTTACTTGAAGGAGGACCAGCTTGAGTACCTTGAGGAGCGCCGTCTCA AGGACTTGGTCAAGAAGCATTCTGAGTTCATCAGCTACCCAATCTCACTTTGGGTTGAGAAGACCACCGAGAAGGAGGTATCTGGTGATGAGGATGAGGA AGGGAAGAAGGATGAGGAGGGTAAAG
• Tissue: pods
• Gene name: LI_gene_191811;
• Additional information: details;

Expression of Ll_transcript_485152

FPKM

• PAB: 11
• PNAB: 51.2
• PS1: 19.3
• PS2: 31.3
• PS3: 28.9
• PW1: 17.8
• PW2: 14.4
• PW3: 9.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485152

• Blastp: Heat shock protein 83 from Ipomoea with 89.36% of identity
• Blastx: Heat shock cognate protein 80 from Lycopersicon with 94.32% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (109146489)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447045.1)
• Pfam: Hsp90 protein (PF00183.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;