Ll_transcript_485156

• Id Trinity: TRINITY_DN52329_c3_g1_i7
• Name Transcript: Ll_transcript_485156
• Sequence: CTGATGTCAGCATGATTGGACAATTTGGTGTTGGGTTCTACTCTGCATATCTAGTTGCTGATAAGGTTATTGTTACGACTAAGCATAACGATGATGAGCA GTATGTATGGGAGTCGCAAGCTGGTGGTTCATTCACTGTTACAAGGGATACATCCGGTGAGAATCTTGGCAGGGGAACTAAGATTACTCTCTACTTGAAG GAGGACCAGCTTGAGTACCTTGAGGAGCGCCGTCTCAAGGACTTGGTCAAGAAGCATTCCGAGTTCATCAGCTACCCAATTTCACTTTGGGTTGAGAAGA CCACGGAGAAGGAGATCTCTGATGATGAGGATGAGGAAGAGAAGAAGGATGAGGAGGGTAAAGTAGAGGATGTTGACGAAGAAAAGGAGAAGGAGGAGAA GAAGAAAAGGACAATTAAGGAAGTGTCACATGAATGGGACTTGGTGAATAAGCAAAAGCCTATTTGGATGAGGAAGCCTGAAGAGATCACAAAGGAAGAG TATGCTGCTTTCTACAAGAGTCTTACCAATGATTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTGGAGTTCAAAGCTGTTCTCT TTGTACCCAAGAGGGTACCTTTTGATCTCTTTGACACAAAGAAGAAGCCGAACAACATCAAGCTCTATGTTCGTCGTGTCTTCATCATGGACAACTGTGA GGAGTTGATTCCCGAGTATCTTGGATTTGTCAAGGGTATTGTGGATTCTGAAGATCTTCCACTTAACATTTCTAGAGAAACGTTGCAGCAGAACAAGATC CTGAAGGTCATCCGCAAGAACTTGGTTAAAAAGTGCCTTGAGTTGTTCTTTGAAATTGCGGAGAACAAGGAGGACTACACCAAGTTCTATGAGTCTTTCT CCAAGAACTTGAAATTGGGAATTCATGAGGATTCCTCCAACAAGGCCAAGATTGCTGAGTTGCTGAGATACCACTCTACCAAGAGCGGTGATGAGCAGAC CAGCCTGAAGGACTATGTCACCCGGATGAAGGAAGGTCAGAGTGATATCTACTACATTACTGGTGAAAGCAAGAAAGCTGTCGAGAATTCTCCCTTCCTG GAGAAGTTGAAGAAGAAGGGGTATGAGGTACTGTACATGGTTGACGCCATTGATGAGTATGCTGTTGGCCAGCTGAAGGAATTTGAGGGCAAAAAGTTGG TATCTGCTACCAAGGAGGGTCTGAAACTTGAGGAGAGTGAAGATGAGAAGAAAAAGCAGGAAGAACTGAAGGAGAAATTTGACGGTCTCTGCAAAGTGAT CAAGGATGTCTTGGGTGACAAGGTGGAGAAAGTTGTGTTATCTGACCGTGTTGTTGATTCACCATGCTGTCTTGTGACCGGTGAATATGGATGGACTGCT AATATGGAAAGGATTATGAAGGCTCAGGCATTGAGGGATAGCAGCATGGCTGGGTACATGTCAAGCAAGAAGACACTGGAGATCAACCCTGAGAATGCCA TCATGGAGGAGCTGAGGAAGAGAGCTGATGCTGACAAGAATGACAAATCTGTGAAAGACCTTGTTCTCCTGCTGTTTGAGACTGCTCTCCTCACTTCTGG GTTTAGCCTTGATGAACCTAGCACTTTTGGGAACAGAATTCACAGGATGCTGAAGCTTGGACTGAGCATTGATGAGGATGATGCCGGTGAGGTGGATGCT GACATTCCAACATCGGAGGAAGTTGATGCTGAAGGAAGCAAGATGGAGGAAGTTGATTA
• Tissue: pods
• Gene name: LI_gene_191811;
• Additional information: details;

Expression of Ll_transcript_485156

FPKM

• PAB: 14.6
• PNAB: 71.7
• PS1: 31.8
• PS2: 46.3
• PS3: 37.2
• PW1: 18.4
• PW2: 16.8
• PW3: 12.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485156

• Blastp: Heat shock cognate protein 80 from Lycopersicon with 91.99% of identity
• Blastx: Heat shock cognate protein 80 from Lycopersicon with 91.99% of identity
• Eggnog: Molecular chaperone. Has ATPase activity (By similarity)(COG0326)
• Kegg: Link to kegg annotations (543903)
• CantataDB: Link to cantataDB annotations (CNT0000451)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435703.1)
• Pfam: Hsp90 protein (PF00183.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;