Ll_transcript_486507

• Id Trinity: TRINITY_DN52331_c2_g1_i10
• Name Transcript: Ll_transcript_486507
• Sequence: CTTTGACCTTCTGCTCTGCTTGTTCCTTTTTTGTGTATCGGTGATGATATAGAGATATGTTTCTTGCTGGTTTCAGTGTGTTTTGGTGTATATATAGATG TGTTGATATTGTTTGTGTGATATATGTGGTGGATGGGTTGTGGTGTCTGAGTACTTGTGTGGTTGTGTGTATGTGTTTTTTCTGCCTCTCTTCTTTAACT GCCTCTCCCTGCCTTTTATAGAGTTTATTAGGTGTTCTCGGCAGCCCTTTGGGCTGCCGCAACTGTTACACCTCTTCCTTTTCCAAACCTCCAGTTAATG AGGTTTCAAGTGCCATAATTGGCATCTTGAAACTGCTCTCTCTGCTGTTTTTTCTGGATATGGTTAATGGTCCTTTAATTTAATAATTTCATTTATACGC CGTTTGTTCTATATGAATGATATGTACATGTTCAAATTCACCCGTGAATAATATAACCCTTTTGGCATTTTGTACTATATTTTTTTATTATTTAAAAATG GCCGGACAAAATTGGGTGTTCACAGAAGTGTAATATCTTCTAGACACCATAAAGGCATGTTTCTAGATACTACTAATAGCATGCAACAACTTTTTAATTT GTGATGCGATAACTGAACCAATGCAGCTATGTGGATGCCATTTTAGAGTTGAATTCTATCAGATGAATTTTAGAAGAGTAATAATGTTGTAGTATAAACA AGAAGAGCTTTGTGCATGTTTGCTTGTATCAATGATGAGAAAAAGTAATTTGGTGGACAAACTTGGTCCCCTTGCTTTCATGCTAGAGAAACTTTTGTTG TGGACTATCAACTTTAACTTTTTTTGTTATAAATCAAGCTTTCTGGCTTTATAGAACTTCCATTTCAGCTCTTATGATTTTTGACAAATCTGAGGCATCA AAATAGAGAAACACTGAAACTGAGAGAGCAAAGGTATAGTTTAAGACCTATCTCTGATGGGCAACAAGTTCAAATTGTCAGATATGATTCCAAATGCATG GTTTTACAAGCTCAAAGATATGAGCAAATCTAGGAAGAGAAATGGTTCTCATGTTATGAAGAACAAAGCAACTGGATCCTCGACGGATCATAGGCTACAT GACTCAACCTCACCAACAACATCCCAAAGGTCACTCCCAAGATATTCACATTATGTCCTCACTGAACCAAGCAGAACAGGAAAGTTATATAAAACACCTG TTCACACCAATGACTTGAACATACCATTCATTGATTCGCCGCGATGGTCATCTAAGAGAAAGTCTAGGAGAAAAACCATTTACAAGCCTTCTCCGAAAGT CGTATCTTCTTCTTTCAAAGCTAGTTCCAGCTGTGATTCTACAACCCATTGGACTAAGACATGTCAAGTTCAGTCTCCATTCTATGATGTCTCTTCCTTC GAAAGTTCTTCCGAATCTGATATCCATGAATATGTTTATTCTGAGTCTGAATGTGATACATTTTCTGTTCCTGACTTGCTTAATGGAATAGACTCTAATT GCAGCTGCAGAGTTAGCTCTTCCACTAATGACATTATCATTGACATGAAAAATGAATGCTTCACTGGAAATCCTGAAAATTTAGATGGGTTTAATACAAT TTCAGAGTTAGGCCTTGCTCCATTACATACAAAGCCAGTGATGTATGATGATAAGGGAACTGAAGCTACTGAGTTTAGAAGTTCAAGTTCAACTGATTTG GATGTGCTGCAACTTTGTCATACTCTCCCTGTCAAGTTTAGCAAAGAGAAAAAAAGTAAAACTCATAGAAGGAGAAAAGGAAATCGCATAACTCGAAAAT CATCTGCTAATTCTACAGGTGTAAAACTTAGAGTCAATTCTCCAAAATTGGCAAGCCGTAAAATTCAAGCCTATGCAAGAAGTGTGTTATCCAGTAGTTC TAGTAAAGCTTCCAGGAATACAAACTTCCCAGAAGGATATGCTGTTATTAAGTCTTCATTTGATCCACAGAGTGATTTCAACGAGTCAATGGTGGAGATG ATCATCGAGAACAATATCCGGGCATCAAAGGATTTGGAGGACTTACTTGCCTGCTATCTTTCCCTTAATTCAAGTGAATACCATGATCTCATTGTTAAAG CATTTGAGCAAATTTGGTTTGACATGGCTCAACTGAAAATGTAAAGATCTTAGATTATCCAATGCATGTTTATAGTATAGGCTTGTAACCAGTACCACTC TGTGAATCAACTTATGTTCTGAATTGTCAGGATTCCAAATAGGGTATCCATCCATATATAAAGAATGTTCTCAAATTGACTCGGAAATATGCAATAGATA GAAACATGGAATTTGGTGTCATAAATAAATTCATCTTTGCACATTATTCAGAATTTGGCTATGGACAGTGATAGCAGTCTCCAGTTTATGACTCAATCTA TACCTGGATAGCCTGATAAACACAATCTATTAACAAAAAACACTTTCTTAATTACTAAGATTGTCACTGTTGTAGTTGTTTGGGTTTTTTTATTTTGTCA AATGTACACTATAT
• Tissue: pods
• Gene name: LI_gene_191826;
• Additional information: details;

Expression of Ll_transcript_486507

FPKM

• PAB: 6.1
• PNAB: 7.8
• PS1: 7.2
• PS2: 8
• PS3: 9.7
• PW1: 7.4
• PW2: 9.4
• PW3: 8.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_486507

• Blastp: Transcription repressor OFP2 from Arabidopsis with 33.01% of identity
• Blastx: Transcription repressor OFP4 from Arabidopsis with 36.32% of identity
• Eggnog: DUF623 domain containing protein, expressed(ENOG410YV5M)
• Kegg: Link to kegg annotations (AT2G30400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432297.1)
• Pfam: DNA-binding domain (PF13724.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;