| Id Trinity | TRINITY_DN52337_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_486987 |
| Sequence | CTAACTCTTCCATTCATTAAAACCACTCCATCTTACTTACTAACTTTCTTAACTTCATTTAATCTCTCTCTCTTTTTTCTACTTTGCTTTATTCCATCAA TGGTGTTCATTATGGGTTTTGAGAAAGTTTTGTTTTTTACCTTTTCAACCTCAAAAGCAAGGATACCTTAGAGTTCAAGTGTTTTATTTTTCTATATGAA TGAAGTCATTCAACTATGAAAGCTTCTTCATTCAAAGTTTGATTGCGGCGGGTGCTTAAACTTGAAACTGTGACTGGTTCAAATTCAAGCCAAGATTTTT ATATCCCTTTTATATTCTTATCCATCCCACCTATTTATTCCTTAAGATTTTTATATTTCTTTGGTCAATATCTCTGTACTTTAATGTGTTAATTTCTATC TAGTTACAAGAACTGTGATGTGTTAATATAGGTCTTAATAGTTATACTGATGCTGAAGAATTTGATAGTTTGAGCTTTTAAGGTTTAAGGGGGTGTTAGT GTTGCAAAGATATGGATCAAAATAGGGGAGAGAGTTGGAGAGAATTGGTGAAGAAGATGCTTCCTCCTGGTGCTTCTGTCCCTGATGATTCTTCTAATCT TGACTACTCCATAGCTTTGGAATATGAGGGTCCAAAACTACCATATGAAGTACCAAGAGTTGAACCACTTGATGTAAACTCAAGGGTGATTCCTACTGCT GAACCACTGTCTGAGTCGCAAAGATCGGTTGCTTGTATGAGAGGTCCTATGGTGATTGAACCAATCCCTCTTCCGGTGTCTCGGATTGCCGGTGTCACAA GTTCTCCCAATCACAGTCCAAGGTTGTCTGGAAGTTCAGAATCTGTGGTGTCTGTCTTACAAAACCATGATCTTTCTTCTGCTTCGGCTTCGCCTGCTTC GGTTAATAATCCTACAAATAATCCTCTTAGGCAAGAAACAAAGAGGGCGCCTGTTGTCACTTTTAATACTAATGTTGAAAGGTCTCAGATGAAAGAGATG GAGGTTGTGAAGCCAGTTTATCCGGAATATGTTGGGGTTGTGAAGGAAAAGAAGAAAAAGAAAACAAGAGTTTGTTATAGGTGTGGGAAAGGGAAGTGGG AAACTAAGGAGTCTTGCTTTGTTTGTAATGCCAGGTATTGCAGCAATTGTGTGCTCAGGGCAATGGGATCAATGCCTGAAGGACGCAAATGTGTTACATG CATTGGTCAGCCGATCGATGAATCAAAGCGTCTGAAATTAGGTAAACATTCGAGGGTATTGTCGCGACTGTTAAGTCCTCTAGAAGTCAAACAAATTATG AAAGCGGAGAAGGAATGTCTGGCAAATCAGCTTCGGCCAGAGCAGCTGATTGTCAATGGTTTGCCCCTTAAGGCTGACGAGATGGCAGACTTACTTGGGT GCCTCTTACCTCCCCGGAAGTTAAAGCCTGGTAGATACTGGTATGACAAAGAATCTGGTCTCTGGGGAAAGGAAGGTGAAAAGCCTGACCGGATCATAAG CTCAAACTTGAGTTTCACCGGAAAGCTTAGCCTTGATGCAAGTAATGGAAACACTGAGGTTTACATGAATGGTCGAGAGATTACAAAACTTGAATTGAGA GTACTAAAGCTAGCAAACGTGCAGTGTCCACGCGATACACACTTTTGGGTTTATGATGATGGTCGTTATGAGGAGGAAGGTCAAAATAATATCAGAGGAA ACATTTGGGAGAAGGCATCTACAAGAATTGTTTGTACCTTGTTCTCCCTACCCTTTCCCCATGGACAGCCTCATGGGCAAAGAGACGAAGCCAGTAATTA TACTACAGTTCCTAATTACCTGGAACAGAAAAAAATCCAGAAGCTTCTTCTTCTGGGACTTCAAGGATCCGGAACTAGCACTATATTTAAGCAGGCTAAG TTTATGTATGGGAATACATTTACTGTTGAAGAGCTGCAGGATGTGAAATTGATGATCCAGAGTAATGTGTACAAATATCTTAGCATTTTACTTGACGGAA GAGAGCGATTTGAGGAGGAGGCTGTCTCTAGAATGCATGGACAAAGTTCTCCAGGTCAAAGTACGGAAGCAGGTAGCGATGTTGAAACAAGTAACAATGG TGAATGTATCTATTCCCTCAACCCAAGGCTAAAGCATTTCTCTGACTGGCTGCTGGATATTATAGCCACTGGGGATCTAGATGCATTCTTCCCTGCAGCC ACACGTGAATATGCACCATTAGTTGAAGAAGTGTGGAAAGATCCTGCAATACAAGAAACCTTCAAAAGAAAAGATGAGCTTCACTTTCTTCCAGATGTTG CAGAGTACTTCTTAAGCAGGGCTGTTGAGATATCTAGCAATGAATATGAACCTTCTGAAAGAGACATAGTCTATGCAGAAGGGGTTACTCAGGGAAATGG TTTGGCGTTCATGGAATTCTCACTTGATGACCGTTGCCCAAAGTTCGAATTCACAGATAACCTGGATGCTCAGCCACCTCAGATCAAGTACCAACTCATA AGGGTTAATGCCAAGGGCATGAATGAGGGATGCAAGTGGGTTGAAATGTTTGAAGATGTGAGAGCAGTGATCTTTTGTGTTTCCCTAAGTGACTTTGATC AGTTATGGCTTGCCCCAGACAGTAGTGGTAGTGGAACACTTCTTCAAAACAAGATGATACAAAGCAAGGAACTTTTTGAGACCATGATCAAGCACCCTTG TTTCAAAGATACCCCTTTTGTCCTGATCCTTAATAAATATGATACCTTTGAGGAAAAGATTAGTAGGGTATCCCTTAATGCATGTGAATGGTTCCATGAT TTTTGTCCTATGAGGGCACATCACAACAACCAATCGCTGGCCCATCAAGCTTATTTCTATGTTGCAATGAAATTCAAGGAGCTTTATGCTTCTATCACGG GTAGAAAACTTTTTGTGTCACAAGCCAAGGCAAGGGACCGTGTTACTGTTGATGAAGCATTCAAGTACATAAAAGAGGTTCTCAAGTGGGATGAAGAAAA GGAAGAGAATTACTATGGTCCACCTGAGGATTCATTTTACAGTACAGATATAAGCTCTTCTCCCTATGTTAGACAAGAGTAATTTAATCATCACAAGAAA ATAAATAATATCATTCCGTTATTCGTGAGTTTGGTGCAATGATAAAGTCGTTAATCTTAGAAATAGTCTCTTTGTTGCAGGCTGGTTAAGTACATTTACC CTACTCAGACCGACCACATTGAGTGAGAAGCCCGTGCACCGGAATGCCCTTTTATATTTGGTTATTTGTACCTTTTGTGGAGGTTGAGGGTGGAATATGT AACATGCTGGGTAGGCCTTGTTCTCTAATATTTTATTATGTCTTCTGTAATCTGAATTATAAGTTATTAATTAATCATAAGTTATTAATGATTTTGGTGG GTTTTCAAGTTAAATCTCTGTCTTGTAGCAGCATATATGCATTTCCTATGCATGTGCAGACACTGTTTATGGGTACTTGTGCTGTTTATGGTCTAGATAA TTAATTTGTGGAGGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_191892; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_486987
| Blastp | Extra-large guanine nucleotide-binding protein 3 from Arabidopsis with 69.78% of identity |
|---|---|
| Blastx | Extra-large guanine nucleotide-binding protein 3 from Arabidopsis with 79.23% of identity |
| Eggnog | Guanine nucleotide binding protein (G protein) alpha(ENOG410XNVQ) |
| Kegg | Link to kegg annotations (AT1G31930) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421491.1) |
| Pfam | G-protein alpha subunit (PF00503.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |