| Id Trinity | TRINITY_DN52342_c2_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_487404 |
| Sequence | GGTTTATCCAAATATTTCACCTTTCAAGATTGTTTGAATAGGAGGGAAAAAACAATAATAGAATTAGGAAGTTTCCGCAACGTGTGAGAGGGGCATCGTA TCGTATAATCTATGTAACTGATTCACATTTTAAAAGCAACACCATAGAAGTTTTTATGTTTTCCCATCGAATCCAATAATCGATTTTCAACAACAGTTCC ATCTTCGTTCGTAATCGTATCATCCATTCCAACCCTAACAATTATGTTGCAGCAGAGAACACGACGTCGTTGCGAGGGTACAGCCATGGGCGCAATCATT CTCGATCTTCGACCTGGTCTTGGAATCGGACCTTTCTCTCTCGGAATGCCAATTAGTGAAGCATTTGCCCAGATAGAGCAGCAGCCTAACATATACGATG TTGTGCATGTCAAGTATTATGACGAGGAGCCCCTGAAGATGGATATTGTTATAAGCTTTCCAGATCATGGCTTTCATCTTCGTTTTGATCCATGGTCTCA GGTGTTGTGTTTGTTCTCTGTTTTTGTGCCTATGATTGATTTATTCCCAAGTGTGTGGTGATTATTTGGAAAGGAAAACATACATTAGGGGATCGTTTTG TGAATTTTTTAACTTTTGTATCTTTAATAAGAAGCGTGAGTGTGTGACTATCTAGGACTGCAAGTGTCATCAAGTTCAATGGTGTGTACTGCCTGAAGTT TTGGGTTTTTTCTTCAATGGATATGTTCACTTTTTTATAATTAAGTTCTTTTCCCATCAAGAAAACACTGTGCTAGAGTATCTGTATTTTTTTACTTTAT ATTGTTACTTTATTGTTCAAAAGTTGATGGAGCACTGTCAATTTCTTTTGTTTATTCGTAAAGATCTAAAGCTCCAACCTCTGTTTTACGTAGCAGTTCT AATGCTTTCTATCATTTAAAGCCTTTGATTGAGACTATAGTGCTCCTATTTATTACTACCCATAAATACACGACAAGTTGACTTTGTGGTGACTAAGTTT TCCAATACTATTTTAGAGATTGCGGCTTATTGAAATATATGATGTAAAGCGGCTTCAAATGCGTTATTCCACTTCCCTGATTGGGGGACCAGCGACTCTA GCCACCTTTGTTGCTGTATATGCACTGTTTGGACCCACATACCCTGGAGTTTATGATAGGGAGAGAGGTGTTTACACACTATTCTATCCGGGGCTTTCCT TTGCATTTCCTATTCCAAGTCAGTATACAGAATGCTGTCATAATGGGGGAGTGGAATTGCCATTGGAGTTTCCAGACGGCACCACACCAGTTACCTGCCG TGTTTCTATATATGATAGTTCTTCTGGTAAGAAGGTTGGCGTGGGGTCTTTGATGGACAAGGCTTCTGCTCCTCCATTACCTCCTGGCAGCATTTACATG GAAGAGGTTCATGTTAAGCTGGGGGAAGAATTGTACTTCACTGTTGGCACTCAACACATTCCTTTTGGTGCATCTCCACAGGATGTCTGGACCGAGCTAG GTCGACCCTGTGGCATCCATCAGAAGCAGGTACCATGAACTACTGGTTCTTAAATGGAATGTTGTTATTTTGTTTTCTTTTTGTGGAGCTAAATGTTGCC GCATTGTCTGATTGATGAGTAAATTCATTCTGTTTCTTTATTGTTGGTTACTATGAAGAATTGATTTATGACAACTGCATAGATATGGTACTTTTTTCTT CATGGTTCTTGTAAAATGAAGGATATATGAATGCAAGCCTAGAGCTTAATGAAATGCTTGGGCATGATATTGGAACATGTGGACATCTTGTATGACCTCT ATTTATAAGCTCCTAAGGCTAGGAACTGAGGTGGGTCCAAAAATGTGTTATAAAGAACTTATATTCTAAAGTAAGTTTGAAGCAAATTATGTTTTCTTGT AATTGTGATGGTAGTTTGACTATTTCTTCATGGAATATTGATGTTTACCACATACTTACCTGTCAGCTCTTTATTTTAAGGAGGCCTAATCTGTATTCTT CCGAAGTTCCGAACTTGGAATGTTTCTAACTACTAAACTACTTGAATGAGTACTTTGTGTATATATTCTGACTCTTAATTCTGCAGGTAGATCAAATGGT TATTCATTCTGCCTCAGATCTTCGGCCACGAACAACACTTTGTGGAGATTACTTCTACAATTATTTCACTCGTGGTCTGGATATCTTATTTGATGGGCAG ACCCACAAAATCAAGAAGTTTGTGTTGCATACCAACTACCCTGGTCATGCTGATTTCAATTCATACATTAAGTGCAACTTTGTTATCTATGGCTCAGATT CAGTGGGGGCATCTTTTCAGGAAGTACATAACAGCAAGCAGAGGGCTATTACACCTAGCACAAAGTGGGAACAAGTGAAGGAAATCCTTGGGGATTGTGG GCGAGCTGCCATTCAAACACAAGGTTCTGCAAGTAACCCTTTTGGTTCAACTCTTGTATACGGTTACCAAAATATTGCTTTCGAGGTGATGAAGAATGGT TATATTGCAACTATAACTCTCTTCCAGTCATGATGATGGTACATTTCTTTATTGTGTTTTTGTTTGAATATAAATTTATACTTTATTGGGATAGCGAGTA GAAACCTTAGTTTTTTGTTAGCTATCAGTTATCTTGAAAGTCCAAGCTAATTTCTATCTTGCAGGAATTGTTAGTTACTCTTCATCTCTCTCTGTTTTAA GGTTTCTCAAGCTTGGTTATGGAACTTCACGTGGAGTAGTGGCTAGGTTTGTACGGTCAATCAGTATAAATATTCAAGCCATTATCATCATTATCGTGGC AAGGGGCTATGATTGTACAGCTATGTGCCTATTTAACAAACTGTGCATGTCAATATCACGGTTATTTTGATTTTTTACTTTGGCATCCTGCACCAAGCTA ATGTAAATATGTAATAAATTTCAATTTATTGACCTTTCAGATATTCATATTGTGAGATTCTTGGTTACTTTCCTTGCTTTAGGTAGTATATATATAACCG GCTTAAGAGTTAATATTACGGTTGAATCACC BLAST |
| Tissue | pods |
| Gene name | LI_gene_191936; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_487404
| Blastp | UPF0183 protein At3g51130 from Arabidopsis with 83.54% of identity |
|---|---|
| Blastx | UPF0183 protein At3g51130 from Arabidopsis with 83.72% of identity |
| Eggnog | Chromosome 16 open reading frame 70(ENOG410XT40) |
| Kegg | Link to kegg annotations (AT3G51130) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422128.1) |
| Pfam | Uncharacterised protein family (UPF0183) (PF03676.13) |
| Rfam | - |
| GO | - |