Id Trinity | TRINITY_DN52349_c1_g2_i3 |
---|---|
Name Transcript | Ll_transcript_486404 |
Sequence | CGGAATTCCACATCTACCAGTACTAAACGATGCATAAGATTAAGAGCAAATTGTGTTTCTTCATGAAACCTCGCAGAAGCATACTTTCTTTGACCATCAC CTCTCTCTGTAGTTCTTCCTGTGCTTATTTATGCTGCATAAATTTAAGCATAAACATTACTACTACAACCACGACCCTATCTATATAAGGGACTTTTCAC AAAACACAAAACCTTAAAGTTAGAATTCAAAACCACCAAACTAAAGCTTTGAATCCCTCAAACAACACGTGAGTCTTGGTTTAGACCTTGTAAAACACAA AAAGTAACCTTGCAAATTTGTATTCACACACCTTTATTTTCCAATTGGAAAGTGTCCTAGTAGATTCCTTAGTAGGAATTCAAAGACTGCACCTTTCTCT CATTTTCCAGTTTTTGACCCGTATTTGTGGAATATTTGTCACCCCAAGAGCCTATATAAGCAAAGTTAGTGTTTGATATTTGAGTCAGATTTCAATTCAT TTTCAGCAACAATAACTTACAAGAGTCAGAGACATATATTCATACTCCATAGTCCATAAAACAAAGACAGAAAAAGAGGGTTCTCATTTTCAAAGTGTTA TTTGCATCTATATGGGGGTGATTTTGAGAGCAACTAGCTTCAACAAAAGAGAATCAGAAACAGATAATGTTTTGTCAAATGAATTCAATAAGAATAGCAG TTCAAGCAGGTTAAGGGATTGTAGACCTGAACAAGTGATCCTTGAAAGAAATTTATCATTTTTTCAAGATAAGGAAAACATGGACTTGAATTCTCCTGCA AGCAAAAGTGATGAATTCTATAAGAAACCGGTGCCGAAGCTTTCTTTGCCAAAAGCAGTGGTTTTCTCATCCCCTAGACCTGTCATTGAGCTTGATGCTG CTGCAACTAAACTTCAAAAAGTGTACAAGAGTTACCGTACTAGAAGAAACCTTGCAGATTGTGCAGTAGTGGTTGAGGAACTATGGTGGAAGGCATTAGA TTTTGCTGCTCTCAAACGGAGTTCTGTCTCGTTCTTCGATGTCCAGAAACAAGAAACCGCCGTGTCACGGTGGGCAAGGGCAAGGACAAGAGCAGCTAAG GTTGGGAAGGGTTTGTCTAAGAATGAGAAGGCACAGAAACTTGCACTACAACATTGGCTTGAAGCTATCGACCCACGCCATCGCTATGGACACAATCTGC ACATGTATTATGATATTTGGTTTGAAAGCCAAAGCACCCAACCATTTTTCTACTGGTTGGATATTGGAGATGGCAAAGAAATAAATCTTGAGAAGTGCCC AAGGAGCACTCTACAAAGGCAATGCATTAAATATCTTGCACCAAATGAAAGGGAAGAATATGAAGTAATTGTCGAAAATGGAAAGCTTGTTTTCAGACAG GATGGGAGGCTTGTGGATACTGATGACAAGTCCAAATGGATATTTGTTCTTAGCACCACAAGGGCCTTGTATGTGGGGAGAAAACAGAAAGGTAAATTTC AACACTCAAGTTTTCTATCTGGAGGTGCAACCACAGCAGCTGGCAGATTAGTGGCCCATCAAGGTGCCCTTGAGGTAGGGGTTCAATAATGCATTTCATT ATTTCATACAAGCCTTATATAACCAAAGTCATTATTATATTTAGAGGGTAAGATGTATATTCAACATTATGATATCATATAATGCATGCTCATGCATAAG AATGGTTGTTCTGATAAGTAAAATATGCTAACAAAGTGTTGTCATACCCATCATTGCAGGCTATTTGGCCATATAGTGGTCACTACCATCCAACAGAAGA GAACTTTAAAGAATTTATAAACTTTCTTGAAGAGCACAAAGTAGACCTCTCTAATGTGAAGGTAATAAATGTTTGGTTCTCAAATAATGAAATGAATACC CTTTGTATTAAGTTAATGTCGCTAACTCTGTCTCCCCAACAAGATAGCGTCGCATCATTTAAAATTCTACGGTTCAATCTTTAGGCTGAAATTTTAAGTG ATGTGACACTGTCTTATTGACGAAATATGGTTAGGGAAATCAACCCGGGGCAACGATCTTGTTTACAAATAATGTACCTGCCACTTAATAAAGCAATTAT AGTTGCCTATAAATTTTTATGAACAATTACCTAATGGTTATTTTTGCTTGTTTGATGCAGAGATGTGCCATAGATGATGATACTCCTTCACTAATTGGAA CCAATTCATTTACTGCCACTAATGAATCACAACAAACCACAACATATGCAATTAATGTGAATGATAGCAATGTGGTAACAACAATTCTTAAAGAAGTTGA TGGCAAAAAAGTTGAGGTCCCACAAGCATTTAACTTGTCCAGGAAGTTATCTCACAAGTGGTGTAGTGGGGCTGGGCCTCGTATTGGTTGTGTCCGAGAC TATCCTGAACACTTGCAATCAAGGGCATTGGAGCAACTCAATTTGTCACCAAAGCCCAATTCTTCAAGACTCACTAACTATGGCCCAATTCCTTCACCTA GACCCAGCCCAAACGTCAGAATGTCCCCGAGGATTGCTTACATGGGATTACCCAGCCCAAGAAACCTAATTCCAGCTTCAAGTTAAGGGATTTCAGACCA TTTTTTTTATATAAACTAATCTTTTTCGGGTTCGTGATTTCAAACCGTTTTAGTATAATACACTTCTTGCCACGATAACTAGTAAATGATAAGATTAGAG GACTACGGAAAATTCTTGTTTCTCTTGTATTTTTGTCCCTAAAATTCGTTTATTTCTTTTTTCTTTTGTGAATTTGGATTTGTAAGTATTCAGATTTCTG ACTCAGTGTGCCACATTGTACCCAATGCTCATATTTGCCTCTTTCTTTTTGGGGAAGGCATAAAGGTTCAATCAATTCTTTACTGTATATAGAATGCAGA ATGTAATTTAAGCTCAAATAATTCATAAGCCATTCTCAGGAAAAATATTGTCTAATATAAAAACAAGGTTTTAGAGTGATTTTTTTTTTTTTTTACAAAC CCAACCTCAAGCTTATAAATTAGCGGAAAAGTTTATAGT BLAST |
Tissue | pods |
Gene name | LI_gene_192013; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_486404
Blastp | IQ domain-containing protein IQM1 from Arabidopsis with 75.71% of identity |
---|---|
Blastx | IQ domain-containing protein IQM1 from Arabidopsis with 75.4% of identity |
Eggnog | calmodulin-binding family(ENOG4111I0K) |
Kegg | Link to kegg annotations (AT4G33050) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442948.1) |
Pfam | IQ calmodulin-binding motif (PF00612.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |