Ll_transcript_486407

• Id Trinity: TRINITY_DN52349_c1_g2_i6
• Name Transcript: Ll_transcript_486407
• Sequence: CTCACACTGTTACATGAAAAAAGAGCTGGTTGACTATTAAATATGATACACGAAATTCCAAATTTACTTATACTAAGGGATGCATAAGATTGAAAATCAA TTCGTGTTTCTTCATCAAACCTTGTCCAGCATACTTTCTTTGACCACTAGTTCTCTCTGTAGTTGTTGTGCTTATTTATGCACCATAAATATAACTATTA CTATTACTACAAGCACAACCCTATATAAGAGACTTTCCATAAAACTTAGTGAGAATTCAAAACCACCAAACCAAAGCGTGAGTATTTGTTTGGACTTTGG AAAACAACAAAAAAGTGAGATTGGAATTTTGTATTCACTCACCTTTATTTTCAATTGGAAAGTGTCCAGACATAAAAAGAGAGTTTTCTATAAAGTGTTA TCTACATCTCTATGGGTTTATCACTTTCCATACTCCAATCAGCCTGGGAAGAAATTGTGAGACATTCACTCTTTGCTCTGCCTCTCAACATCAGTTTCGC TTCGAAAGATGGTGCTTTGATTTTGAGAGCAACAAGCTTCAACAAAAGAGAATCAGAAACTACTAATCTTTTGTCAAATGGGTCTAATAAGAATAACAGT TCAAGCAGGTTGTGGGATTCTAGAACTGAACAAGTAGTGGTCCTTGAAAAAAATTGTTCATTTGTTCAAGATAAGGAGAACATGGATTTGAATTCTCCTG CAAGCAAAAGTGATGAATTCAATAAGAAACCAGTCCCTGTGCTATCCTTGCCTGAAGCAGTGGTTTTCTCTTCCCCTAAACATGTCAGTGAGCTTGATGC TGCAGCAACTAAGCTTCAAAAAGTGTACAAGAGTTACCGTACTAGAAGAAACCTTGCAGATTGTGCAGTTGTGGTGGAGGAGCTATGGTGGAAGGCATTA GACTTTGCTGCTCTTAAGAGAAGTTCTGTCTCATTCTTTGATGTCGAGAAACAAGAAACCGCTGTGTCGCGGTGGTCAAGGGCAAGGACAAGAGCAGCCA AGGTTGGAAAGGGTTTGTCTAAGGATGAGAAGGCACAAAAACTAGCACTGCAACATTGGCTTGAAGCTATTGACCCACGTCATCGCTATGGACATAATCT GCACATGTATTATGATATTTGGTTTGAAAGCCAAAGCACCCAACCATTTTTCTACTGGTTGGATATTGGAGATGGCAAAGAAATAAATCTTGAGAAGTGC CCAAGGAGCACTCTACAAAGGCAATGCATTAAATATCTTGCACCAAATGAAAGGGGAGAATATGAAGTAATTGTTGAAAATGGAAAGCTGGTTTTCAAAC AGGATGGGATGCTTGTGGATACTGATGACAAGTCCAAATGGATATTTGTTCTTAGCACCTCAAGGATCTTGTATGTGGGCAGAAAACAGAAGGGTAAGTT TCAGCACTCAAGCTTTCTAGCTGGAGGTGCAACCACAGCAGCTGGCAGATTAGTATCCCATCAAGGTGTCCTTGAGGCTATTTGGCCATATAGTGGTCAC TACCACCCAACAGAAGAGAACTTCAAAGAATTCATAAGCTTTCTTGAGGAGCATAAAGTAGACCTCTCCAATGTAAAGAGATGTGCCATAGATGATGACA CTCCTTCACTAATTGGGACCAATTCATTTACTGCCACTAATGAATCACAACAAACTACAGCAAATGCAATAATTGTGAATGATATCAATTTGGTAACAAC CATTTATGAAGAGGGAGATGGCAACAAAATTGAGGTGCCACCAGCATTTAACTTGTCAAAGAGGTTATCTCACAAGTGGTGTAGTGGGGCTGGGCCTCGT ATTGGGTGTGTCCGTGACTATCCTGAACACCTTCAATCAAGGGCATTGGAGCAGGTCAATTTGTCTCCTGGCCCTACTTCTGC
• Tissue: pods
• Gene name: LI_gene_192013;
• Additional information: details;

Expression of Ll_transcript_486407

FPKM

• PAB: 1.3
• PNAB: 2.3
• PS1: 11.7
• PS2: 4.5
• PS3: 7.1
• PW1: 1.4
• PW2: 3.1
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_486407

• Blastp: IQ domain-containing protein IQM1 from Arabidopsis with 57.92% of identity
• Blastx: IQ domain-containing protein IQM1 from Arabidopsis with 57.92% of identity
• Eggnog: calmodulin-binding family(ENOG4111I0K)
• Kegg: Link to kegg annotations (AT4G33050)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464651.1)
• Pfam: IQ calmodulin-binding motif (PF00612.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;