| Id Trinity | TRINITY_DN52350_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_486172 |
| Sequence | CCAAGAGCAATTACACCTATCTCGCCCACCATTAAATGCAATTGCACCCTCTCAATACTCTCTGCAATTACTCATCGCTGCTACATTTTCTTCCATATGT TCCCTACTTCTCTTTCTTTCTTCCTTGAATGCCTTTATCCCAATATAACTCTCTTACCTTCTTCTTCTTCTACCCACCTCCGTTTCTCACTCTAAAAAAA ACTAGCTTTTCTGGCTAACCTACACTATCATCAGAACCTTCCTCCCACTCTTTTTTACCATTTATCAGCTACTTGGTTCTCATATATAATGGTTTCTCAA ACCCTTCTTTGAAAAGGGTCCTTTTTTTCTGAAATAAGTCTACAGTCCCAAAAAGATCTATACTTTCGTCGCCATCTTTCCATACTTACCCTCATCAACT ACCACCCAATTGGCAAGTGAAAAACTATAGCAAAAGTTGGTTTCGAAAGGTTCTCATTTTGCAGAAAATAACCATATTGTTTAAAAAAAAGGTTTAACAA TTTTTTTGTGGGTGACATAATCTAAGAACAGGAAACCTCTGAAGTTCTCAATCTAAGAACCTCGGAAGACCATTGCTAGAGAGAAGAGAGAGAGAAAGAG AAGATTTAAATATTCCATAAACACTATGTATGGTGAAATATGCAAGCTAGTATTATGATTCGGGTGAGAAACATTGGAAGGAACAGCAGCGTTGGTGTGT TTGGATCATCATCAGTCCTCACTCTTGGTTAGTTCGGTGCTTAAAAACTTTCCACCTACTCACTCAGATTGAAACCCGATAAGAAGATCCGTGAATATGT TCCAACCAAACCATCAGTTTCTTAGCGCACTTGACAACATGGCTCAGAACACTTCTGAGAGCGATATACCTCGGATCGATGAGTTCGACAGTGCTAACAG GTCTGGCAGTGAAAACCAGGAAGGTGCCTCTGGTGAAGACCAAGAGCCCAGTGCAAAGAAGAAGCGCTACCATCGCCACACCCAGCATCAGATCCAGGAA ATGGAAGCGTTCTTCAAGGAGTGCCCACACCCTGATGACAAACAAAGAAAGGAACTGAGCAGGGAGCTAGGGTTAGAGCCATTGCAGGTTAAGTTTTGGT TTCAAAACAAGCGCACTCAGATGAAGACCCAAACTGAACGCCATGAGAACACACAGCTTAGAACCGAAAACGACAAGCTTAGAGCTGAAAACATGAGGTA TAGGGAAGCTCTTAGCAATGCCCAATGTCCAAATTGTGGTGGACCAACTGCTATGGGAGAAATGTCATTTGATGAACATCACCTCAGGCTTGAAAATGCA AGGCTAAGAGAAGAGATTGATCGCATTTCTGGTATTGCTGCCAAGTACGTGGGAAAGCCAATGGTGGATTATCCAAACCTTTCTCCTTCTCTTCCTCCAC GCTCACTTGAACTTGGAGCTAATGGCGGGTTTGGTGGCCATCCAGCTGGGATTCGCGGTGGTGATATGTATGGAGTTGGTGGAGATCTTGTAAGGTCAAT TAGTGGACCCACTGAAGTTGATAAGCCAATAATAATTGAGCTTGCTGTTGCAGCTATGGAGGAGCTTATTGGGATGGCACAGATGGGCGAGCCTCTTTGG TTGACAACTCCGGATGGCACTAAAATTGTGCTAAATGAGGATGAATACATAAGGTCCTTTCCTCGAGGAATTGGACCAAAACCCAACGGCTTTAAATGTG AAGCTTCTCGAGAAACTACTGTTGTTATCATGAACCATGTTAATCTTGTTGAGATCCTCATGGATGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_192018; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_486172
| Blastp | Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 from Arabidopsis with 64.67% of identity |
|---|---|
| Blastx | Homeobox-leucine zipper protein HDG2 from Arabidopsis with 64.58% of identity |
| Eggnog | Homeobox-leucine zipper protein(ENOG411107H) |
| Kegg | Link to kegg annotations (AT4G04890) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453767.1) |
| Pfam | Homeobox domain (PF00046.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |