Ll_transcript_486016

Id TrinityTRINITY_DN52352_c0_g1_i7
Name TranscriptLl_transcript_486016
SequenceAAGAGGCAAAAGGGCCTCAAACCAGGAATGCTGCACGTAGAAAAGCAGCTCTTGACAAAGAGGCGCAAATGAAGCCTGTAAATGGCGACTCTACTTCTGA GGATGAAGATTTGGATATATCTCATGTAGAAATTGACGAGGCATTGATGATTGATGATGATGATGATATTTCTGATGATGATGATGATGATGACCATGAA GATATTTTGAGTGATGTTTCTCTCCCTGTTTGCTTGCCTGACAAAGTACATGATGTGAAATTGGATGACTCTGCTGAGGACAGCATAGTTGCTCCTGTAA CAAGTGATGGCCAGACTGATGCAGCTTCGGGTTCTAGTACCAAAGTTGGTACAGCCAAGCGATCAGACACTGCTGTGTTTAGGGGTGGCTATTCTTCTAG CTCAAGGGGTGCATTGTCATTCGCTGCTGCTGCCATGGCTGGACTCGGGTCTGTTAATACCAGAGGTATCAGGGGTGGCAGAGATAGGCATGGGCGTCCG TTGTTTGGCGGATCTAATGATCCTCCGAAGTTGATCTTCAATGCTGGCGGAAAGCAGCTTAATAGGCATTTGACTATATATCAGGCAATCCAGAGACAAC TTGTGGTAGATGAAGATGAGGAAGAGAGGTTTGCTGACAATGACTTTGTATCTAATGAAGGAAGCAGGTTGTGGGGAGATATTTACACTATAACTTATCA GAGGGCTGAGAATCAAACAGACAGGGCTTCTGCTGGCGGTTCAATTTTAAATGTCTCAAAAACTGGAAAATCTGGGTCTTCATCAAATTCTAGTTCTGAA GCCAAGCTGCATCAAATTTCTGTTCTTGATAGCATCTTGCAGGGGGAATTGCCCTGTGAACTGGAGAAATCAAATCCTACATATAACATATTGGCACTAT TGCGTGTGCTGGAGGGTTTGAACCAACTAGCACCTCGTTTAAGGGCCCAGGTGGTTATTGATAGCTTTGCTGTGGGAAAAACTTCGGATTTAGATGAGCT AGGCGTCACCAGCGGTGCCAGGGTTCCTCCAGAGGAATTCATCAGCAGCAAGCTTACTCCAAAGTTAGCTAGGCAAATGCAAGATGCCCTAGCATTATGC AGTGGGAGTCTTCCGTCGTGGTGTTACCAGTTAACTAAAGCCTGCCCTTTTTTGTTTCCTTTTGAGACCCGGCGACAGTACTTCTATTCTACTGCCTTTG GGTTATCTCGTGCACTGCATCGACTGCAGCAGCAACAAGGTGCAGATGGTAATGGATCAACAAATGAAAGAGAGGTGAGGGTCGGGAGATTGCAGCGGCA GAAGGTTCGTGTTTCTCGAAATCATATTTTGGATTCTGCTGCTAAAGTGATGGAGATGTATTCTAGCCACAAGGCTGTACTTGAAGTAGAATATTTTGGT GAAGTCGGCACTGGCCTTGGACCCACCCTTGAGTTTTATACACTTTTAAGTCATGACTTGCAAAAAGCTGGACTGCAAATGTGGAGATCAGATTCTTCAG AGAAATATCAAATGGAAATTGATGGAAATGAAAAGAAAAGTAAAAGCATCGATAGCTCTTTTGCTGGAGATGGAGAACTTGTCCAGTCTCGTCTTGGGTT GTTCCCTCGTCCATGGCCTGCAAGTTCCAATGCATCTGAGGGTACCCCTTTTTATAAAGTGATAGAGTATTTCCGGTTGGTAGGTCGTGTTGTTGCTAAA GCTCTTCAAGATGGACGCCTATTAGATTTGCCGTTGTCAGTGGCATTTTATAAGCTTGTTCTTGGTCAAGAGCTTGATTTGCATGACATTCTTGTTATTG ATGCTGAGCTTGGGAAAACTTTGCAAGAGTTGAACGCTATTGTATGTCGGAAAAGTTATTTAGAATCTGGTGGTAGCTATACTGATAAAATTGCTAATTT ACATTTTCGAGGAGCCCCAATTGAAGATCTGTGCTTGGATTTCACACTTCCTGGTTATCCAGAATACGTTTTGAAACCAGGAGATGAAATTGTTACCATT AATAATTTGGAGGAGTACATATCCATGGTGGTTGATGCAACTGTCAAGACTGGAATCATGCGTCAAATAGAAGCATTTAGAGCAGGATTCAATCAGGTTT TTGACATTTCAAGTCTACAAATTTTTACTCCCCAAGAACTGGACTATTTGCTTTGTGGTCGTAGAGAGATGTGGAAGGCGGAGACACTAGTCGACCATAT AAAGTTTGATCATGGGTACACAGCCAAGAGCCCTGCTATAGTTAACTTACTTGAAATAATGGGAGAGTTCACACCTGAGCAGCAGCGTTCCTTCTGTCAA TTTGTTACTGGTGCACCTAGGTTGCCACCTGGTGGACTGGCTGTTCTAAATCCAAAACTAACGATTGTGAGGAAGCTTTCATCAACGGCAGCTAATGTTT CGTCCAATGGGAATGGACCTTCTGAATCAGCCGACGATGACTTGCCGAGTGTGATGACATGTGCTAATTACCTAAAGCTTCCTCCTTACTCTACCAAGGA AATTATGTACAAGAAGCTACTCTATGCAATCAGTGAAGGCCAGGGATCCTTTGATTTATCATGAGTTTCTGGAACTAACCAATCTGACCCTGTGTGTTAA TATGATGAATCAGGAGTCTACTCTCAAGGCTCAATTATTTTTTGGTTGCATGTACTTTCCTCCTTGCTCTCAAATAATCGCGGGCGCATGTCCAAGGTTG TGGCATAGTTCAGGTGAGCTTGCCATTTCAGTGAGATGGGATCTCGTTATTTTATTCTATGTGCTGCAGCACTTGCACAATTTTTGTTGATGATTTTACC CATGTGACATGTTCTTCATTTTCTGATAAGCTCTTACGGATTCTTCCATAAATGACAGTTGAATCGGATTGCCACATTTTCAAGGTGTAAAGGAATTTGC AGAGCTTGTTCTAGCAACTAGAATGTGTAAATAAAATAGGAATGTTGAGTTTTTTCGTCCTTAATTTTTATACTCTGTTTTCAAGTTAAGATGGCAGCCA GCTATTATACATGTATGGAAAATGTTAAAAGGGAATAGAAATAATATGAAATACTATGATATTTATGATATCATTATATTCCAGTTAGATCCTTTCAACT TCATCT BLAST
Tissuepods
Gene nameLI_gene_192037; 
Additional informationdetails; 

Expression of Ll_transcript_486016

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_486016
BlastpE3 ubiquitin-protein ligase UPL3 from Arabidopsis with 69.6% of identity
BlastxE3 ubiquitin-protein ligase UPL3 from Arabidopsis with 69.48% of identity
Eggnogubiquitin protein ligase(COG5021)
KeggLink to kegg annotations (AT4G38600)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019450983.1)
PfamHECT-domain (ubiquitin-transferase) (PF00632.24)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;