Ll_transcript_485992

• Id Trinity: TRINITY_DN52358_c0_g2_i3
• Name Transcript: Ll_transcript_485992
• Sequence: CTGAAAGATCAAACGGTTTTGATATTCTTCATGATGAAAGAGTGAGTGTTGCAGCTGATGTATTGGCTGGTATTTGTGGTTCTCTTTCATCCGAGGCTAT TAGTTCCTGCACAAGCTTGGTTGATCCTGTGGAAGGTAACAGGAATCTGAAGTGCGTGAGACTAAGCCCTCTATGCCAGCAACCCGAGATACCTGATGTC ACTCAGGATATGGATGATGTAATTTTTTCAGATGAGGGCTGTGAGGAAATGGATCCTACTGATTGGACAGATGAAGAGAAGGCATTGTTTCTTCAGGCTG TGTCATCTTTTGGTAAGGATTATGCTATGATTGCACAGTATGTGGGGACAAGGTCTCAAAGTCAGTGCAAAGTCTTCTTCAGCAAGGCTCGAAAGTGCCT CGGGTTGGATCTCATGCATCGCAGACCTGAAAATTCGGGATCTCCATTAAATGGTCATGCAAATGGTGGCGGGAGTGACACAGATGATGCATGTGTTGTA GAGACAGGTTCAGCCAATGGCTCCGATAAGTCTGGCACTAAAACAGATGAGGAGTTGCATTCGTCTGTCTTGAACTCATACTGTGATGTATCCTGCCACA TGGAAGCCAGCAACATGTCAACTGACTTAAATGAATCAAAAAAAGTTAATGGGGCAGAAGTACATCATGAACATGTAAATATGGTTTCTGATGCATTTAT AATTGAGGGAAAGACTAAACTGGCAAATGATGGTAATGCCATTATCTTGCACAGTTCTGATGCGTCTGGTTCAGTCCTGGGCCAGAAAGCTATAATTATT TCAGACAGCACAGAAGTTGGAAAAGATAAAAAAGAAGTGGAAGGTGCAACTTCAGAATTGGCATCTGCTACAGAGATAATTGAACCATACCACTGTAATT CTGTTGCTGAGGTTTTTTCTTCTATGGGTAATGAAAATGAATTGGAGGGGCGAAGAATGTTATCACCTCAATTCCTTGTTGAAAGAGATGATAAACATGA AGCTGATACAGGTGCTTTAGCCTGTTCGAGATTGAGTTTTGATGTTGAAAGTCAGCCCCAACTGTCTATGGAAAAGCCTCATATCTCAGGGTTGTCTGTG GAGAGTCCTCATGCAGCTACAAATTCATTGTTGCAAAATGCCACCACTCCTTCTCCATATGAGAAAATAGCTAGCCAAGATCAACTGTCTTCTACTTGTT ATTTTCAGGGAAGTGGAGATAATTACTGCCATAATTCCATTAGCAATGTTGACCATCAGCTTCATAATCCTGGAGGGTTATTAGAGCATGCTGAGGCTGC TACCACCAGCCAGTGTTATTCTTTGCAAGTGCCCGTTAATAAAGAAGTGAATGTGGATACAAGTTGCAGTGGTTCCTCAAAGAAGTTGCCACTTCTGACT CAAAAGATTGAACAAGCTGATGATCATTGCAAAACAGAATTGCAGTGTTTGTTAGATTCAGAAAAAATATCCAGAAATGGTGATGTGAAACTGTTTGGGA AGATACTAACCATCCCTTCGTCCACCCAGAAACCTAATTTAACCACCAAGGGAAGTGAAGAAAATGATACTCATTATCCCCTGCTAAGCAGTAACTCTTC GAATCTGAATTTTACTGGTCATCACATTGCTGATGGAAAATCAGCAGTTTTGAAGTTTGGCCATAATGATCACACAGAGGGCCTTGAAAATGTTCCAGTC ATTAGTTATGGCTATTGGGATGGGAACAGAATACAGACCGGTTTCAAGGCACTGTCTGATTCTGCCATCTTGCTTGCAAAATATCCTGCTGCATTTAGTA ACTATCCAGAAGCTTCTGCAACATCAGAGCAACAGTCATTGAAGGCATCGGCCAAAAGTAATGAACAACACCTTAACGGTGCATTTACAACTAGAAAAGT CAACTGCAACAATGGTGTGGTTGATTATGAAATGTGTCGAAACAGTGACGGTCCAATAGTGAAGCCATTTATGGTAGATGTAAAGCTCCACCAAGATGTG TTCTCAGAGATGCAGAAAAGAAATGGTGTTGGTGAACCGGGGACGCTTGTCGAAGGTGGAGTCTCGGATCCTGTCGCCGCAATCAAAATGCATTACTCCA ACTATAGTGATCAGAGTGGGAGTATCACCAGAGAGGATGAATGTTGGGGAGGGAAAGAGGAGGCAGGTAGTAGTAGGTGCTCTGTATAATAGTGTTTTTG TTTATTGCTCAATACAGTGATAGGGCGATTTGTTTATTAGGTGCTTGTATTATGCAGTAGCTCTGTATTTGTTGTATTGATTGAAATACAGAAATAATCT CTTTAAAAAGTTAGAGAGGGATCATTGCCATTTTGGATCCCTTATTCCAATCACTGCTCACTCCAACAATCATCTACCATTTCAGATACTAATTTTCTCG TTTGGGTACTAATTTTCTAAGAAGCAAAGTTAGATGGGACTTGCTTTGGGCTCTAATAATGGGAAAGTGAAGTTTTATGGTGTGTTTCCAAGTTGATTTA TGGAAGGTAAGGAAGGGAAGAAAAAAGCTTAAGTTGAGAGCCATGAAATATACATGTAAGATGATTCTCAAATTTTTTCTTTTCTTTCACTCCGCTCCAA AAAATCAACACACAAAACTCTATCTTTGCTCTACTTTTGAAGTTCGCTTCGACTCCTTAATACTAGTAGTACTCAAGTAACTGAAATCATCGCTATGCTG CTCTTGTTAGGGTTAAGATTTTGATCCAGAACATGTACAACTAAATCATAAATTTGATGAACTCGTGGTTATGTTGTAGAAAAGGAGATGAGGTGATAAA TTTTGTGTTGTAAAGATTAGATACACGACAAGTTTTATTAGTTCTTACCTTTTTTATCAACATGTTGGGTTGAAACATCCTTGTAGAATTTGAAACCACC ACTCTCC
• Tissue: pods
• Gene name: LI_gene_192065;
• Additional information: details;

Expression of Ll_transcript_485992

FPKM

• PAB: 5.1
• PNAB: 11.7
• PS1: 11.6
• PS2: 8.6
• PS3: 10.9
• PW1: 10.6
• PW2: 11.1
• PW3: 13

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485992

• Blastp: REST corepressor 2 from Danio with 30.97% of identity
• Blastx: REST corepressor 2 from Danio with 30.97% of identity
• Eggnog: Rest corepressor(ENOG410XSIS)
• Kegg: Link to kegg annotations (402934)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430277.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;