Ll_transcript_485997

• Id Trinity: TRINITY_DN52358_c0_g2_i6
• Name Transcript: Ll_transcript_485997
• Sequence: GTTTTCTTTCTCTCTTATCTCCCACATTCTTCACTTTCTCTTCCACACACCTCATTTTTCAGAGAAACACTAACAAATTCTTTGAACATTTTTCAAATTG AAAAGTCCAAAGAAAATTGCCATAGCCACAGTTCAAACTCTTCAAGTACCAAGCTTTCAATGAAACCAAGAGCTTTGGATTCTCTCACTACATGAATCCA TGGCTTATACACGCTGCTGATTTGTTGCTATCTTCTTCGATCTGAATCGCCGTATCTTCATATATACTCTGTCACTTTCTTCAAATCTGAAGGTGTTGTG AATTCAGTGTTGTTTTGCCTCATGCGGCTGGGTTGAAATTTTCATGCCGCCGGAACCTATACCTTGGGATCGGAAGGAATTCTTCAAGGAGAGGAAGCAC GAGAGGTCCGAATCTCTAGGGTCCGCGGCGAGATGGCGAGACTCACCCTCCTACCATGGTTCCCGGGACTTAAATCGCTGGGGATCTTCCGATTTTCGCA GACCGGCCGGTCATGGTAAGCAGGGTGGTTGGCACCTGTGGCCTGAAGAATCTGGTCCTCGGTACTTGCATTCTCGATCCTGTGACAAGATGCTGGACAA TGATAACTGCCGGTCAGTGGTTTCGGGAGGGAATGGAAAATATAGCAGGAGCAGTAGGGAGAATAGGGGATCATTTGGCCAGAGAGATTGGAGAGAACGT CCGTGGGATACTTCTAATGGCTCTCCGAGCTTGTCCAGGAGGCAACTGGATGCAACTAATGCCCAGAGGTCAGATGATGACATGCTAACATATTCCTCTC GTCTACATGTCGACTTTGTAAACACTTGGGAGCATCATCATTTGAAAGACCAGCATGATAAAATGGTTGGTGTCAATGGGACAGGCTCAGGCCAGAGATG TGATAGGGAGAGTTCACTGGGTTCAGTTGACTGGAAGCCACTTAAATGGACCCGTGCTGGAAGCTTGTCTTCACGAGGCTCAGGTTTTAGCCACTCGAGA AGCTCAAGGAGCTTCAGAGTGACTGATTTATATGAAGGGAACGCAGAGTTGCCACATAAAAATGCAGCTGTCATTGAGTCACATTCAAGGGAAGCTGCTG TGTGTGTGACATCTTCTGCTCCATCTGAAGACACAGATTTGAGGAAGAAGCCTAGGCTAAAATGGGGTGAGGGACTTGCAAAGTTTGAGAAGAAGAAAGT TGAGGGGCCTGATGAAAGTTCAAGTAAAGATGGTCCCATTTTGTCTACTAGTAATCTTGAACCTTGTAATGCTCTTTGTCCCAGTGTAGTAGATAAAAGC CCAAAAGTTACAGGATTTTCAGGTTGTGCGTCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGGTGTGGATGATAAATTATTTGTAAAAG CTGCAGATGTGGACAATGATGTTAATAATTTGAGTGGTTCACCTGGTCGTGGGTCTCATGATCATTTGCAGAAGTTTTCTTTTAATTTAGAGAAGTTGGA TACCGACTCATTGACTACTTTGGGTTCTTCACTTGATGAATTGCTACATTTTGATGATTTGATTTCTGTGGATTCTAGTCTAGTAAGGTCCACTGCAATG AATAAGTTGCTGATCTGGAAAGCTGACATTTCGAAGGTATTGGAGGTGACTGAAACTGAAATTGATTCACTTGAAAATGAATTGAAATCACTGAAATCTG AATGTGGGGGTAGATTTCCATGTCCAGCTGCAGCTGTCTCCTTGCTGATTTGCTACGATGCAAAATCTTGTGATGGACATGTTGGAGGCTCTGACAAGGA TGCTCATCCAAAGCCGGTGCAAATTGTTTCTTGTGATGACCCTAATCTGGAGAAGATGCCGCTTTCAAATAATTTGCATAGTATACATGATAATGGCAAG GAAGAGGATATTGATAGTCCTGGAACAGCAACATCGAGATTTATAGAGCCTCTATCTTTGAATAATGCAGTTTCCTTGTATGATGTGGGTAGAAATGACA CTTGTGCTCTACACTTGGATGGTATTCAGTCTACATCCATGCAATTCTTAGTTCCCTGCACTCAGAGCCAAGTTGCTAGTGTATCTGATCGTGGTGATGG TAATACATCTATGGGAGATGCCATGGATGCTAATGCTGGTTCAAGCTTATGTTCTATAACTGAGGATATTTTATATAACACAATTCTTTCTTCCAATAAA GAGTGTGCAAACAGAGCATCTGAAGTATTTTCTAAGTTATTTCTGAAAGAATGTGGTAATACTGGTAATATTAAAGCTAGCAGCAGTTCAGGCTCTCATA ATGGTTCATCCATCATGGAAAGATTTGCTGCGAAAAAGCGGTTAGCAAGATTTAAGGACAGAGTTATAACACTTAAGTTTAAAGCCTTGCATCACCTGTG GAAAGAAGATATACGCATACTGTCTATAAGGAAATGCCGCCCAAAATCTCATAAGAAAGTCGAATTAGGTGTGCGAACAATCAGCAGTGGTCAAAAGAGT CGATCCTCTATTCGTTCTCGTTTTCCTTTGCCTGGAAATCATCTAAGCTTGGTTCCAAATTCCGATATGAATTTTGCAAGCAAATTGCTTTCAGAGTCCC AAGTCAAAGTTCACAGGAACAGCTTGAAGATGCCAGCATTAATTTTGGATCAGAAGGAGAAAATGATTTCGAAGTTTATATCTAGTAATGGGCTGGTTGA AGATCCATTAGCTATTGAGAAAGAAAGGGCTATGATCAACCCTTGGACATCAGAAGAGACAGATACTTTCCTGGAGAAATTTTTAAACTATGGAAAAGAT TTTCGGAAAATTGCTACTTTCCTTGACCACAAGACAACTGCTGACTGTGTTGAGTTCTACTACAAAAATCACAAGTCAGATTGTTTTGAGAAAATTAAGA AGCAAGATGGCAGAAAGGTAGGAAACTCGTTTTCTGCCAATGCCAACATTATGGCATCAGATAGAAGATGGAGTTGTGAAGTGAATTCTGCTTCACTTGA TATTTTGAGTGCAGCTTCAGTGATGGCAGATAGCATTGCAAGTAACCAGAAAATGCGTTCAGGAAGTCTCCTCTTGAGGGGATTAGGTAGGATGAAATCA TCAAAGGGCAAGGACAGTAACACTGAAAAATCAAATGGTTTTGATATTCTTAATGATGAAAGAGTGACTGTTGCAGCTGATGTATTGGCTGGTATTTGTG GTTCTCTTTCTTGTGAGGCTATTAGTTGTACAACAAGCTCGGTTGATCCGGTGGAGGGTAACAGGATGTGCCAGAAGTTGAGCTCTGTATGCCAACAACC CGAGATACCTGATGTCACTCAGGATATTGATGAGGGAACTTTTTCAGATGAGAGCTCTGAGGAAACGAATCCTACTGATTGGACTGATCAGGAGAAGGTA GTGTTTCTTCAGGCTGTGTCATCTTTTGGTAAGGATTTTGCAATGATTGCACAGTGTGTGGGTACAAGGTCACAAGATCAGTGCAAAGTATTCTTCAGCA AGGCTCGAAAGTGCCTTGGGTTGGATCTTGTGCACCGCAGACCTGAAAATTCTGTATCTCCACTGAATGATCATGCAAGTGGTGGTGGGAGTGACACAGA TGACGCATGTGTTGTAGAGACAGGTTCAGACATTGGGTCTGGTAAGTTGGGCACTAAAACAGATGAGGAATTGACTTCATTTGTCATGAACACATACCGG GAGGTTTCCTACCATGTGGAAGCCAGGAACTTGTCAACTGACTTAAATGAATCAAAAAAAATTAATGGGGCAGAAGTACATCATGACCATGTAAATATGA TTTCTGATGCATTTGTAATTACGGGCAAGACTAAACTGAACAATGATTGTAATGACGTTATCTTAAACAGTTCTGATGCATCTGGTTCAATCCTGGGCCA GAAAGCTATAATTATGTCAGATAACACAGGAGTTGGAAAATATAAAAATGAAGTGGAAAGTGTAGTTTCTGAATTGGCTTCTGCTACAGAGATAATTGAA CCATGCCACTCAAATTTGGTTCCCGAAGTTTCTTCTGGAGGTCATGAAAATGGACTGGAGAGGCAAAGAGTGTCATCATCTCAATGCCTGGTTGATAGAC ATGATAACCATGAAGCTGATACAGATGCTTTAGCCTTTTCAAGATTGAGTTTTGATGTTGAATGCCGTCCCAAATTGTCTCTTGAAAAGCCTCATATCTC AGGATTGTCTGTGGAGAGTCCTCGTGCAGCTACAAATTCATTGTTGCAAAATGCTGCTACTGCTGCTCTATGTGAGAAAACAGCTACCCAAGATCAACTG TCTTCTACTTGTGATTTTCAGGGAAGTGGAGATATGTGCTGCCATAATTCCATCAACATTGGTGACCATCAGCTTCGTAATCCTGGAGGGTTATTAGACC GTGTTGAGGATGCTAGCATCTTCCAAGGTTATCCTTTGCAAGTGCCTGTTAAGAAAGAAGTGAATGTGGATACAAGCTGCAGCGGTTCCTCAACGGAGTT GCCACTTCTGACTCAAAAGATTAAATCAGCTGATGATCATTATAAAGCCAAATTGCAGTGTTTGTCAGATTCAGATAAAACATCCAGAAATGGTGATGTG AAACTGTTCGGGAAGATACTAACCACTCCTTCATCCACCCAGAAACCTAATATAACTACCAAGAGAAGTGAAGAAAATGGTACCCATCATCCCATGTTAA GCAGCAAGTCTTCTAATCTGAAATTTGCTGACGGAAATTCCACAATTTTGAAGTTCGATCATGATGATCATACTGGGGGGCTTGAAAATGTACCAGTAAT GAGTTATGGTTATTGGGATGGGAACAGAATACAGACTGGTTTCTCAGCATTGCCTGATTCTGCCATCTTGCTTACAAAATATCCTGCTGCATTTACTAAT TATCCTGCATCTTCTGCAAAATCAGAGCAACAATCATTGAAGGCATTGGCCAAGAATAATGAACACCTGAATGGTGCATCTGCTTTTTCAACTATAGAAG TCAATGGCAACAATGGTGTGATTGATTACCAGATGTATGAAAATAGGGATGGTCCAATAGTTCAGCCATTTATGGTAGATGTAAAGCTCCACCAAGATGT GTTCTCAGAGATGCAGAAAAGAAATGGTTTTGAAGATACCTCAAATTTACAGCAACAGGGAAGAGGAATGGTGGGAATAAATGGTGTTGGCAAACTGGGG ACTCTTGTCGGCGATGGAGTCTCGGATCCGGTTGCAGCAATCAAAATGCATTACTCCGATTCTGGTGGTCAGACTGGGAGTATCACCAGAGAGGATGAAC CTTGGGGAGGGAAAGGGGAGGCAGGTAGTAGTAGGTGCTCTGTATAATGATGTTTTCTGTAATTGCTCAATACGTTAATAGGGTGATTTGTTTATTAGGT GCTTGTAATATGCAGCAGCTCTGTATTTGTTGTATTGATTGAAATACAGAAATAATCTCTGAAAAAGTTAGCTAAGTCATTGCCACTTTAGATCCCTTTT TGCCATCACTGTTCTTTTCAACCATCATCGATCTTTTCGGATGATTACTTGAAATACAATTCTTGATGGCGGTACTAATTTTCTAAACAGGAAATTAGAC ATTTGGTTTTCCTTCTTTGCTCTGGTTTTGATAGGGAACAAATTGTAACCTATAGAACTATTCTACTCTTGAGGAAGATATAAACTAAAAGG
• Tissue: pods
• Gene name: LI_gene_192065;
• Additional information: details;

Expression of Ll_transcript_485997

FPKM

• PAB: 2.4
• PNAB: 8.1
• PS1: 10.7
• PS2: 7.1
• PS3: 8
• PW1: 9.4
• PW2: 8.1
• PW3: 6.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485997

• Blastp: Nuclear receptor corepressor 2 from Mus with 39% of identity
• Blastx: Nuclear receptor corepressor 2 from Mus with 37.5% of identity
• Eggnog: nuclear receptor co-repressor(ENOG410YDXP)
• Kegg: Link to kegg annotations (20602)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413245.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;