| Id Trinity | TRINITY_DN52358_c0_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_485998 |
| Sequence | GTTTTCTTTCTCTCTTATCTCCCACATTCTTCACTTTCTCTTCCACACACCTCATTTTTCAGAGAAACACTAACAAATTCTTTGAACATTTTTCAAATTG AAAAGTCCAAAGAAAATTGCCATAGCCACAGTTCAAACTCTTCAAGTACCAAGCTTTCAATGAAACCAAGAGCTTTGGATTCTCTCACTACATGAATCCA TGGCTTATACACGCTGCTGATTTGTTGCTATCTTCTTCGATCTGAATCGCCGTATCTTCATATATACTCTGTCACTTTCTTCAAATCTGAAGGTGTTGTG AATTCAGTGTTGTTTTGCCTCATGCGGCTGGGTTGAAATTTTCATGCCGCCGGAACCTATACCTTGGGATCGGAAGGAATTCTTCAAGGAGAGGAAGCAC GAGAGGTCCGAATCTCTAGGGTCCGCGGCGAGATGGCGAGACTCACCCTCCTACCATGGTTCCCGGGACTTAAATCGCTGGGGATCTTCCGATTTTCGCA GACCGGCCGGGTGGTTGGCACCTGTGGCCTGAAGAATCTGGTCCTCGGTACTTGCATTCTCGATCCTGTGACAAGATGCTGGACAATGATAACTGCCGGT CAGTGGTTTCGGGAGGGAATGGAAAATATAGCAGGAGCAGTAGGGAGAATAGGGGATCATTTGGCCAGAGAGATTGGAGAGAACGTCCGTGGGATACTTC TAATGGCTCTCCGAGCTTGTCCAGGAGGCAACTGGATGCAACTAATGCCCAGAGGTCAGATGATGACATGCTAACATATTCCTCTCGTCTACATGTCGAC TTTGTAAACACTTGGGAGCATCATCATTTGAAAGACCAGCATGATAAAATGGTTGGTGTCAATGGGACAGGCTCAGGCCAGAGATGTGATAGGGAGAGTT CACTGGGTTCAGTTGACTGGAAGCCACTTAAATGGACCCGTGCTGGAAGCTTGTCTTCACGAGGCTCAGGTTTTAGCCACTCGAGAAGCTCAAGGAGCTT CAGAGTGACTGATTTATATGAAGGGAACGCAGAGTTGCCACATAAAAATGCAGCTGTCATTGAGTCACATTCAAGGGAAGCTGCTGTGTGTGTGACATCT TCTGCTCCATCTGAAGACACAGATTTGAGGAAGAAGCCTAGGCTAAAATGGGGTGAGGGACTTGCAAAGTTTGAGAAGAAGAAAGTTGAGGGGCCTGATG AAAGTTCAAGTAAAGATGGTCCCATTTTGTCTACTAGTAATCTTGAACCTTGTAATGCTCTTTGTCCCAGTGTAGTAGATAAAAGCCCAAAAGTTACAGG ATTTTCAGGTTGTGCGTCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCAGGTGTGGATGATAAATTATTTGTAAAAGCTGCAGATGTGGAC AATGATGTTAATAATTTGAGTGGTTCACCTGGTCGTGGGTCTCATGATCATTTGCAGAAGTTTTCTTTTAATTTAGAGAAGTTGGATACCGACTCATTGA CTACTTTGGGTTCTTCACTTGATGAATTGCTACATTTTGATGATTTGATTTCTGTGGATTCTAGTCTAGTAAGGTCCACTGCAATGAATAAGTTGCTGAT CTGGAAAGCTGACATTTCGAAGGTATTGGAGGTGACTGAAACTGAAATTGATTCACTTGAAAATGAATTGAAATCACTGAAATCTGAATGTGGGGGTAGA TTTCCATGTCCAGCTGCAGCTGTCTCCTTGCTGATTTGCTACGATGCAAAATCTTGTGATGGACATGTTGGAGGCTCTGACAAGGATGCTCATCCAAAGC CGGTGCAAATTGTTTCTTGTGATGACCCTAATCTGGAGAAGATGCCGCTTTCAAATAATTTGCATAGTATACATGATAATGGCAAGGAAGAGGATATTGA TAGTCCTGGAACAGCAACATCGAGATTTATAGAGCCTCTATCTTTGAATAATGCAGTTTCCTTGTATGATGTGGGTAGAAATGACACTTGTGCTCTACAC TTGGATGGTATTCAGTCTACATCCATGCAATTCTTAGTTCCCTGCACTCAGAGCCAAGTTGCTAGTGTATCTGATCGTGGTGATGGTAATACATCTATGG GAGATGCCATGGATGCTAATGCTGGTTCAAGCTTATGTTCTATAACTGAGGATATTTTATATAACACAATTCTTTCTTCCAATAAAGAGTGTGCAAACAG AGCATCTGAAGTATTTTCTAAGTTATTTCTGAAAGAATGTGGTAATACTGGTAATATTAAAGCTAGCAGCAGTTCAGGCTCTCATAATGGTTCATCCATC ATGGAAAGATTTGCTGCGAAAAAGCGGTTAGCAAGATTTAAGGACAGAGTTATAACACTTAAGTTTAAAGCCTTGCATCACCTGTGGAAAGAAGATATAC GCATACTGTCTATAAGGAAATGCCGCCCAAAATCTCATAAGAAAGTCGAATTAGGTGTGCGAACAATCAGCAGTGGTCAAAAGAGTCGATCCTCTATTCG TTCTCGTTTTCCTTTGCCTGGAAATCATCTAAGCTTGGTTCCAAATTCCGATATGAATTTTGCAAGCAAATTGCTTTCAGAGTCCCAAGTCAAAGTTCAC AGGAACAGCTTGAAGATGCCAGCATTAATTTTGGATCAGAAGGAGAAAATGATTTCGAAGTTTATATCTAGTAATGGGCTGGTTGAAGATCCATTAGCTA TTGAGAAAGAAAGGGCTATGATCAACCCTTGGACATCAGAAGAGACAGATACTTTCCTGGAGAAATTTTTAAACTATGGAAAAGATTTTCGGAAAATTGC TACTTTCCTTGACCACAAGACAACTGCTGACTGTGTTGAGTTCTACTACAAAAATCACAAGTCAGATTGTTTTGAGAAAATTAAGAAGCAAGATGGCAGA AAGGTAGGAAACTCGTTTTCTGCCAATGCCAACATTATGGCATCAGATAGAAGATGGAGTTGTGAAGTGAATTCTGCTTCACTTGATATTTTGAGTGCAG CTTCAGTGATGGCAGATAGCATTGCAAGTAACCAGAAAATGCGTTCAGGAAGTCTCCTCTTGAGGGGATTAGGTAGGATGAAATCATCAAAGGGCAAGGA CAGTAACACTGAAAAATCAAATGGTTTTGATATTCTTAATGATGAAAGAGTGACTGTTGCAGCTGATGTATTGGCTGGTATTTGTGGTTCTCTTTCTTGT GAGGCTATTAGTTGTACAACAAGCTCGGTTGATCCGGTGGAGGGTAACAGGATGTGCCAGAAGTTGAGCTCTGTATGCCAACAACCCGAGATACCTGATG TCACTCAGGATATTGATGAGGGAACTTTTTCAGATGAGAGCTCTGAGGAAACGAATCCTACTGATTGGACTGATCAGGAGAAGGTAGTGTTTCTTCAGGC TGTGTCATCTTTTGGTAAGGATTTTGCAATGATTGCACAGTGTGTGGGTACAAGGTCACAAGATCAGTGCAAAGTATTCTTCAGCAAGGCTCGAAAGTGC CTTGGGTTGGATCTTGTGCACCGCAGACCTGAAAATTCTGTATCTCCACTGAATGATCATGCAAGTGGTGGTGGGAGTGACACAGATGACGCATGTGTTG TAGAGACAGGTTCAGACATTGGGTCTGGTAAGTTGGGCACTAAAACAGATGAGGAATTGACTTCATTTGTCATGAACACATACCGGGAGGTTTCCTACCA TGTGGAAGCCAGGAACTTGTCAACTGACTTAAATGAATCAAAAAAAATTAATGGGGCAGAAGTACATCATGACCATGTAAATATGATTTCTGATGCATTT GTAATTACGGGCAAGACTAAACTGAACAATGATTGTAATGACGTTATCTTAAACAGTTCTGATGCATCTGGTTCAATCCTGGGCCAGAAAGCTATAATTA TGTCAGATAACACAGGAGTTGGAAAATATAAAAATGAAGTGGAAAGTGTAGTTTCTGAATTGGCTTCTGCTACAGAGATAATTGAACCATGCCACTCAAA TTTGGTTCCCGAAGTTTCTTCTGGAGGTCATGAAAATGGACTGGAGAGGCAAAGAGTGTCATCATCTCAATGCCTGGTTGATAGACATGATAACCATGAA GCTGATACAGATGCTTTAGCCTTTTCAAGATTGAGTTTTGATGTTGAATGCCGTCCCAAATTGTCTCTTGAAAAGCCTCATATCTCAGGATTGTCTGTGG AGAGTCCTCGTGCAGCTACAAATTCATTGTTGCAAAATGCTGCTACTGCTGCTCTATGTGAGAAAACAGCTACCCAAGATCAACTGTCTTCTACTTGTGA TTTTCAGGGAAGTGGAGATATGTGCTGCCATAATTCCATCAACATTGGTGACCATCAGCTTCGTAATCCTGGAGGGTTATTAGACCGTGTTGAGGATGCT AGCATCTTCCAAGGTTATCCTTTGCAAGTGCCTGTTAAGAAAGAAGTGAATGTGGATACAAGCTGCAGCGGTTCCTCAACGGAGTTGCCACTTCTGACTC AAAAGATTAAATCAGCTGATGATCATTATAAAGCCAAATTGCAGTGTTTGTCAGATTCAGATAAAACATCCAGAAATGGTGATGTGAAACTGTTCGGGAA GATACTAACCACTCCTTCATCCACCCAGAAACCTAATATAACTACCAAGAGAAGTGAAGAAAATGGTACCCATCATCCCATGTTAAGCAGCAAGTCTTCT AATCTGAAATTTGCTGACGGAAATTCCACAATTTTGAAGTTCGATCATGATGATCATACTGGGGGGCTTGAAAATGTACCAGTAATGAGTTATGGTTATT GGGATGGGAACAGAATACAGACTGGTTTCTCAGCATTGCCTGATTCTGCCATCTTGCTTACAAAATATCCTGCTGCATTTACTAATTATCCTGCATCTTC TGCAAAATCAGAGCAACAATCATTGAAGGCATTGGCCAAGAATAATGAACACCTGAATGGTGCATCTGCTTTTTCAACTATAGAAGTCAATGGCAACAAT GGTGTGATTGATTACCAGATGTATGAAAATAGGGATGGTCCAATAGTTCAGCCATTTATGGTAGATGTAAAGCTCCACCAAGATGTGTTCTCAGAGATGC AGAAAAGAAATGGTTTTGAAGATACCTCAAATTTACAGCAACAGGGAAGAGGAATGGTGGGAATAAATGGTGTTGGCAAACTGGGGACTCTTGTCGGCGA TGGAGTCTCGGATCCGGTTGCAGCAATCAAAATGCATTACTCCGATTCTGGTGGTCAGACTGGGAGTATCACCAGAGAGGATGAACCTTGGGGAGGGAAA GGGGAGGCAGGTAGTAGTAGGTGCTCTGTATAATGATGTTTTCTGTAATTGCTCAATACGTTAATAGGGTGATTTGTTTATTAGGTGCTTGTAATATGCA GCAGCTCTGTATTTGTTGTATTGATTGAAATACAGAAATAATCTCTGAAAAAGTTAGCTAAGTCATTGCCACTTTAGATCCCTTTTTGCCATCACTGTTC TTTTCAACCATCATCGATCTTTTCGGATGATTACTTGAAATACAATTCTTGATGGCGGTACTAATTTTCTAAACAGGAAATTAGACATTTGGTTTTCCTT CTTTGCTCTGGTTTTGATAGGGAACAAATTGTAACCTATAGAACTATTCTACTCTTGAGGAAGATATAAACTAAAAGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_192065; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_485998
| Blastp | Nuclear receptor corepressor 2 from Mus with 39% of identity |
|---|---|
| Blastx | Nuclear receptor corepressor 2 from Mus with 37.5% of identity |
| Eggnog | nuclear receptor co-repressor(ENOG410YDXP) |
| Kegg | Link to kegg annotations (20602) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413245.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |