| Id Trinity | TRINITY_DN52363_c4_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_487843 |
| Sequence | CAAGAAACTGTGAACAGAACTACACTTGCAGGCACCACACAAATATATTGTTGCTTGGGTGGCACATAACTCTAACAATAATTACTGCCCTTACCAATCC AAGTATCTGTAAGTGGAGTTTCAGTGTCAGAAACCTATCCCAGTAGGAGTAGCTACTAGTGTGGGCTTTTTCACCAAGATCTCCCTTTTTTCTTCTGAAA CCTCTTCACCAAAAAACACATCACTAAAAACCAAATTCATAGATCATAGTTAGTTTTCACTTTACATCAACTCAAAAAAATATCAATCTCAACCACTGTT CACATTATTCCCTCAATAAAATCTCTGCATTCAATAACATATCATCCCATCTTATTAAAGATAAAAACATCATAACCTTTTTATTCAAAACCTTAGTCTC AACCCTTGTTTGTTCCAATGAACATGTTAGGCCTAAGAGACCTAGTTTTCATAGCTCCCAACCCTTCTTCATTGAACCACCAACAAGGCCAACAACAACA ACACATATCAGGTGAACACCATGGCAACATTCCTTTGAATTCATCAGGTGCTCTCAGTGTTGGTCTTGGTATTTTTCCACTCTTAACTATACCACAACCA CAACAACCTCATATGAATGATGTTCATCAAGATTGTGGTGGCAACAACAACAACAACTATTGGAACCTTAAGATGTGTCCAGAAGTGATGAATAATTCCG GTAGAAAAGGAGTTATGATCAACATGGAAGAAAACGAAAGCAACAAGCACATGCTGGAGGGTGAAGAAAATGGAGATAATATCTATGGTGGGGGTGAGTT CAGGGTGTGTCAAGATTGTGGTAACAGGGCAAAGAAAGATTGCAGCTTTAGAAGATGCAGGACTTGTTGCAAGGGACGTGGATATGATTGCAGCACTCAT GTGAAAAGTACATGGGTTCCAGCATCTAGGAGGAGGGACCGGGATATGGTGGTGGTTGGTGGTGGTGATGGTGGTGGTGGTGGTGCTTCTTCTTCTGGTG TTAAGAGGCCAAGAGCTTTAGGGTCATCATCACAAAATGCTGCTACTAACTCTCATAGTTCTACCTCTAATGCTACCACAACAAAGAGCTTTGATACTAG CTCTTATCACCAAGGTTCTTTCACGTTATGTTTCTGCAAAATTTTATTGCATAAAGTTGTTTAAAATAACCCAATCACATTATTAAAGTTTACCAATAAC TTGGTTCTCCTAATTGAGGCTTTTGGATGAAAAATATATAAATAGAGGTTGGTAGAGTTTTGACTCCTAGAATGAGTCTTTTCAACTCAAATCAGATTAA TCATAGTTTAATGTGACTTTTAGATGCAAGACCTGTCACACCAATAAAATTAATAACTATAATACTTGAGCATATCATGCTTAAGTATTTTATTTTTATG TATGTTATCTTTATTTATTCAGCAAAATAAGTTTTGTGCAATAAAACTTTGGAGGTTGAAATTTTAAATGAGTCTTCTTGAAGTGCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_192115; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_487843
| Blastp | Protein LATERAL ROOT PRIMORDIUM 1 from Arabidopsis with 39.74% of identity |
|---|---|
| Blastx | Protein SHI RELATED SEQUENCE 6 from Arabidopsis with 77.5% of identity |
| Eggnog | Domain of unknown function (DUF702)(ENOG4111TEK) |
| Kegg | Link to kegg annotations (AT5G12330) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449844.1) |
| Pfam | Domain of unknown function (DUF702) (PF05142.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |