Ll_transcript_487844

• Id Trinity: TRINITY_DN52363_c4_g1_i3
• Name Transcript: Ll_transcript_487844
• Sequence: CAAGAAACTGTGAACAGAACTACACTTGCAGGCACCACACAAATATATTGTTGCTTGGGTGGCACATAACTCTAACAATAATTACTGCCCTTACCAATCC AAGTATCTGTAAGTGGAGTTTCAGTGTCAGAAACCTATCCCAGTAGGAGTAGCTACTAGTGTGGGCTTTTTCACCAAGATCTCCCTTTTTTCTTCTGAAA CCTCTTCACCAAAAAACACATCACTAAAAACCAAATTCATAGATCATAGTTAGTTTTCACTTTACATCAACTCAAAAAAATATCAATCTCAACCACTGTT CACATTATTCCCTCAATAAAATCTCTGCATTCAATAACATATCATCCCATCTTATTAAAGATAAAAACATCATAACCTTTTTATTCAAAACCTTAGTCTC AACCCTTGTTTGTTCCAATGAACATGTTAGGCCTAAGAGACCTAGTTTTCATAGCTCCCAACCCTTCTTCATTGAACCACCAACAAGGCCAACAACAACA ACACATATCAGGTGAACACCATGGCAACATTCCTTTGAATTCATCAGGTGCTCTCAGTGTTGGTCTTGGTATTTTTCCACTCTTAACTATACCACAACCA CAACAACCTCATATGAATGATGTTCATCAAGATTGTGGTGGCAACAACAACAACAACTATTGGAACCTTAAGATGTGTCCAGAAGTGATGAATAATTCCG GTAGAAAAGGAGTTATGATCAACATGGAAGAAAACGAAAGCAACAAGCACATGCTGGAGGGTGAAGAAAATGGAGATAATATCTATGGTGGGGGTGAGTT CAGGGTGTGTCAAGATTGTGGTAACAGGGCAAAGAAAGATTGCAGCTTTAGAAGATGCAGGACTTGTTGCAAGGGACGTGGATATGATTGCAGCACTCAT GTGAAAAGTACATGGGTTCCAGCATCTAGGAGGAGGGACCGGGATATGGTGGTGGTTGGTGGTGGTGATGGTGGTGGTGGTGGTGCTTCTTCTTCTGGTG TTAAGAGGCCAAGAGCTTTAGGGTCATCATCACAAAATGCTGCTACTAACTCTCATAGTTCTACCTCTAATGCTACCACAACAAAGAGCTTTGATACTAG CTCTTATCACCAAGATCCTGGTTTCAAACAATCTTTACCAGGTCATGTATGTGCACCTGCTGTGTTTAGGTGCCATAGAATGGCTGCTATTGGCAATGGT GAAGATGAACTTGCCTACTTAGCCACGGTTCAAATTAGAGGCCATGTTTTCAGGGGCTTTCTGTATGACCATGGCGTTGATGAGAAAAATGAGACTCCTT ATGTTTCTGTATTGCAACTTGGAAACAATGGTAGTGGAAAGAATAATAGGGAATGTTCTTCTTCTGCAATTGGGGTTCCAACTAGTGCCTACCCTGCTTC TGCATGTTGAGATTGCTTACAGGTACAAAATATACTTAATTCATTGTTACATTCTGAGACCCATTGATTGTTATATTCTTAAGTCATTATTAAAAATATC AATGAGAAAAGCACTATGGATTTACAAATTTTTCTATGTTGATTCTTGTGTTAGCTTAGAAATAGTGAAAATGGTTTACCTAGCTGTTTATTGCTAATCA AAAGCTTAGACTCTCTTGTATATGTGAAATAAGTGAAATGGTAGAGTACTAATAAGCAGAACAAAAAATAAGGAAAAGAGAGAAAGAAATAGAATTAGGA GCTTGGCCCCTTGATATTCACAAGTGTCTAGTTATCCATTTGTGGCTGCATCTGCAAATGAAGGGTAAAAAGAGCACTCTACCTAGTTACCAATATCATA GGTATTCCTTTTAGGCATTTGTTTATTTCATACGATATGTTAGTTACTTTAAAAATCTCACTTTCAATGGAGGGAAATGTTTCTTGAACATCAAAATAGG AATATCTTACAATGTTTTATTTATTTTTTAATGTATACATGTTAGAAAGAGATTATATATCACTAAGAGATATAAATAAATGTATTTGATATCATTTTTA ATGCCCAAATGCTGGAGTACTTCCATAAGAGGATGACAACTAGAAAAGCATTGTTTGTGCCTTTTTTTCAATGTCCATTGAAAGTGTGTGTTTCATTCAC CTTTGTTACATTTATGCTTCTATTTGAGCAAGTGTTCCATGCTTTACTGAGGTGGTGCTTAGGGGCATGCATTGCTTTGTCTACATGATTCACATCTACC ATTCCACATCAACTTTTATTTTAGTAGGCTTATGCTTTCACTTTTGACATTTTTATCTCAATGTATGAGCACATTGTTCTCCTCCAACCCAAAAAGTAAA TAAAAAAAGTAAACAACTCTGTTTATCCTAGCAAGGCTATAATCAAATAACTTGTAACATGGGCTACTAGGTAACTATTGAAGTGCTTTCTTTGCCTAAC ATCTTACCTGGTTTTGATAAAGACAGCCACCAATTAGATTCACCATTTGTTTGGTGGGATCTTTAGACTCACCTCATATGCACACACTGAAATGTCTTCA GTTATATGTTCCTTTTTCTTGCATTCAAAGATTTAACCTAGTTGTCACTCTCCCATGTTGTGTTAGAGATATGTAGATATTACAAAAGCTACAGGTCAGT TATCTCTATTATTTCTTTTCTTATTATATAGGCTCTGCCACGTTTCCCAACACCTTACATAAGATTGTTGGAGAACTTTGTACTCCAAAGTCCTAAGTCC TAACATGCTATCATAATTTCCTAATTTAGCAACCAACTTTGCCATGGTGCATTATTCTTTTCCTAGTTTATAGTTATGAGGGTGAAATATCTTCAAAAGA AAAGAGTGAAAGACCATAGAAAGTGAAGTAAGAATGCAAAAGACAGTTAGTGGGGGCAAGGGAATCCTAAAATAAAAGTCTAAAATACACACTATAATTT GTATATATTGCTATTGTTCTCATAGTTGCTTTATTCTTCTGATTTAGAACAGAATTATTTTACTTTGTAATAAAGCTTCTATATGCCAATGACAGGTGAT GGATCAGTTTTATGACCTCCTGAAGGCAGTTCATTCTGCAGCTTTGCAGGGAAAACTGATCATATATGCTAAATAGTCTTATATTATTATTGTTATGATG TGAATTTCTTCACTGTCCCTTAAAATATTTCTGTTCTACTTTGGTCATAAAAAATTAAAAAAACTTCAAAATAATCCCAAAAACATTAAATGAGTCAAAT TAACCTTTTTACTTGACCCATCATAGAAATTATTTTGACTCGTATTTATGATTTTTAGTATTAGTTTGTATTTCTTATTTTTTCGGATCAAAATGGTACA CTAAAATTTTGTTTTCACTAGAATTTCTTTCCATATGATGTTATGTGCATACATAAAAGAAAGAACCTAGTTTCAAGTTCTTGCAAAAGAATGGAGAACA TTTGTGTGGCAGGATTATATATTCAATGCTTAATACTTTGATCTCAACATTCATGGGGTTCATAGTGGTCCTAGAATCATATGAAAAGTATACAATTATG CTATCCGGCA
• Tissue: pods
• Gene name: LI_gene_192115;
• Additional information: details;

Expression of Ll_transcript_487844

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.2
• PS2: 0
• PS3: 0.1
• PW1: 0.1
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_487844

• Blastp: Protein LATERAL ROOT PRIMORDIUM 1 from Arabidopsis with 40.55% of identity
• Blastx: Protein LATERAL ROOT PRIMORDIUM 1 from Arabidopsis with 47.72% of identity
• Eggnog: Domain of unknown function (DUF702)(ENOG4111TEK)
• Kegg: Link to kegg annotations (AT5G12330)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449844.1)
• Pfam: Domain of unknown function (DUF702) (PF05142.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;