| Id Trinity | TRINITY_DN52364_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_485790 |
| Sequence | TAAAAAGCTCTCAAATACTTTTCACTTATTAACTTCTTTCTCTCTGTGTCGGTGTTCACTTTCCTCTTTTCTGCACCGTTGGGTTCTCATTTTTCACTTC ATTGCACTATTCAGCTGCAACTTTAATCAAAGCATTGAGAAGTTTCAGATCTTTGGTGGGGTTTGAAAAATGAGAGATTTTTTGTCACTGGGTTGGAGTT TTTTCGCTTCATGATTGTGGGGTTGTGCAAAAGTTGGGTGCTTTTGGAATTGGACGAGAAGTGCATGTGGGTTTTCATTTGGATTATTCTTCTATGTTGT TTCTTCAAGAATTTTCGCAAGATAATAATTTCATCGGAGTGTGGGCTTTTGATTCGGAGCAGGGGTAGGTGGGGAAAGTGTGGTTGAAAATTTTCTGGGA AAACTCAGAACTTTGTGTTTGATCATCATTCAGTAAGAACTTTTTGGAGATTTTGTAAGTATTGCCACATAATGCAGCAGCCAGATCACAGAAAAAAGAG TTCAACGGAGATGGAATTTTTCTCCGAATATGGTGATGCCAACCGATACAAAATTCTAGAAGTCATTGGGAAAGGAAGTTATGGCGTTGTTTGTTCAGCT ATTGACACTCACACTGGTGAAAAAGTAGCCATAAAAAAGATTCATGATATCTTTGAGCATATATCTGATGCTGCTCGTATTCTCCGTGAAATAAAGTTGC TTAGACTTCTACGCCATCCTGATATAGTTGAAATTAAACACATTATGCTGCCTCCTTCTAGGAGGGACTTTAAAGATATTTACGTTGTTTTTGAGCTCAT GGAGTCTGATCTGCATCAAGTCATTAAAGCCAATGATGACCTAACGAAAGAGCACTATCAGTTTTTTCTATACCAGTTACTTCGAGCACTGAAGTATATT CACACCGCCAATGTCTATCATCGAGACTTGAAGCCAAAAAATATATTGGCCAATGCGAACTGTAAACTTAAAATTTGTGATTTTGGGTTAGCTAGAGTTG CTTTCAGCGACACACCAACAACTGTATTTTGGACGGACTATGTTGCTACAAGGTGGTATAGAGCACCAGAGCTCTGCGGATCATTTTACTCAAAGTATAC ACCAGCAATTGATATTTGGAGCATTGGTTGCATCTTTGCTGAAGTTTTAATAGGAAAGCCGCTCTTTCCTGGAAAAAATGTTGTCCACCAGTTAGATTTG ATGACAGATCTGCTCGGGACTCCCTCACTGGATACTATATCCCGGGTACGCAATGATAAGGCAAGGAGATACCTAACTAGCATGAGGAAGAAGCAACCTG TACTGTTTGCACAAAAATTTCCTAATGCAGATCCTTTAGCACTACGACTATTGGAAAGGTTGCTTGCTTTTGATCCAAAAGACCGGCCTACTGCCGAAGA GGCATTAGCTGATCCTTACTTCAAGGGACTCTCAAGAGTTGAGAGGGAACCATCCTGTCAGCCTATTACGAAAATGGAGTTTGAATTTGAAAGGCGAAGA GTCACAAAGGAAGAAATTCGAGAGTTAATTTTCCGTGAGATTCTAGAGTTCCATCCTCAACTACTAAAAGACTATATAAATGGAACAGAGAGAACTAATT TTCTTTATCCAAGTGCTGTTGATCAATTCAAAAAGCAGTTTGCCCATCTTGAAGAAAATGGTGGTAAAAGCAGTCCAGTCATGCCACTGGAAAGAAAGCA TGTATCACTTCCCAGGCCAACAATTGTACATTCAAATATGGTACCACCAAAACAGCAATCAAATATTGCTTCCACCAAAAACCGACAAACAGTTGAAGAT TATAATAACAATCCCAGAGATGCAGAAAACCCTGTGGTGAGGTCTATTCATGGAATGCAAAGAGTTCCACTGGCAAAACCTGGTAAAGTTGTTGGACCAG TTGTTCCATACGAGTATGCGAGTGTCGTCAAGGATTCTTATGATCCAAGGACATTTATAAGAGGTTCTGTTCTTCCTACTCAGCCTATACCCCCGACTTA TTATTATCAAAGATCTACCTCTGGGAGTCAAGAAAGGCCAGCACCGACAGAAGCAGATAAGGGTGTGTCTTTACAAGCAAAGCATGCTCAACAGCAATGT GGTGCCAATGGCAAGATAGTACCAGATGTAGCTATCAATATTGATTCCAACCCCTTTTATATGACAAGGGCAGGAGTGAACAAGATAGAACAAGACGATC GGATAGCGATCGACACAAACTTGCTGCAGCCAAAGGCGCAATATGGTGCAATTAGTGCAGCTGCTGCTGCAGCCACTGCTCATAGAAAAGTGGGACCTGT TCAGTATGGTATGACAACAAGAATGTTCTAGTGGAAGAAGTGTTTGTGTTGTGAATATTGAATGGCCATGGTGGAGCAAATCCTTGTAGAGAAAAAAGAT GTTTGTGTGGAGAAGCTATAATAGTCTTTGATGGTTGGTGCTTGTGTGAAATGACATGAGCTAGTGCTTCCACAGAAAAAGCTAGCTTTCTCTGGTCTAA CAGCTATTAACTTTGGTTACAACTTATGAAGAAACTGTACAAGTGAAATTGAGTCCTATCTTGTAATTCTATCATCAAATTTCCATCTTTCTGTGTTCCT ATATAATGCCTTGACATTGAGTTAGAGATGGTTCATCATTTGGCACTAATGTGCAAACTTGAGCAAAACATTTGACAAAATAAGAACTATAGTCTATTAA TAAATGCCATTTGCTCATAATAACTCCTATAACCAGCTTCCAATCTTCCTTTTTTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_192123; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_485790
| Blastp | Mitogen-activated protein kinase 10 from Oryza sativa with 73.72% of identity |
|---|---|
| Blastx | Mitogen-activated protein kinase 20 from Arabidopsis with 72.9% of identity |
| Eggnog | Mitogen-activated protein kinase(ENOG410XNY0) |
| Kegg | Link to kegg annotations (4326668) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435229.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |