| Id Trinity | TRINITY_DN52366_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_487313 |
| Sequence | CTAGAAGGAAGCTTGATATCACAGCAAGAGCTGCTGGTGCTTCAAAGACAATTGAGGCTGAGGTTGATAAGCCACTTGGTCTCACCTTGGGTCAAAAGCC CAGTGGCGGTGTCGTCATCACGGCTGTTGAAGGTGGTGGGAATGCAGCAAAAGCGGGGTTAAAAGCTGGGGATCAAGTTCTTTACACTAGCAGTTTCTTT GGAGATGAATTATGGCCTGCAGATAAGCTTGGATTCACTAAAACCGCTATCCAAGCAAAGCCGGACTCTGTCTACTTTGTTGTCAGCAGGTTCTCTTTAT CTCTTTTTGCTATGGACCTTTGTTCCAATTTCGTAATTCCATTATTTCTGTCCAACATTGGTCATTCTATTGCTGACATAGTTTGGAATTTAACATAAAA TCAATGATGTGCTGGTGCCTGGTACTTTTCATTCACTGCATAACTTCTACGGTTTTTCTTTTCCTTTTTATTTCTTTTGTTTTGGGGGGAAGTTGATTAT TGGTAAAAGATGGAACTTTAATTGAAATGTAAGCCAGACAGTGAAATGTTCCTCAAATAGCAAAAGCCGAGTATTTGCATTTTCATCAATCACAAGTCCC TCTCGGTTTCGACGATGTAATTATGAACAATCAGATATTCATGGTTGGTATTTTTACTCCATCTTTTACTTCTGATTCACAATGGCCAAGATAAGCATCT TACTTTAAATCGAGGTCCATCTTCTGTGTTAGTTATGATTAAATAAATGGTACTGCACAAATTTTGGGAAAGAAAAAGTATATATGCTACATAATAAGGA TATGATAGTTCATTTTCACAAATGAGAATCTTGCTACGGGAGAGTAAATCATTACTGATGTTCATGCGATGATACCAGCTATTAAATTAACTACTTAACA GCATAAATATCTTAATGTTTTTGTTATGAAGAGGTGCTGAAGTGGATGTTAAAAGGCTTCCCAAGCGTCCCGCTCCACCTCGCTTCGGAAGAAAATTAAC CGAGACTCAAAAGGTAAGAATCATTTTGAAGTTTCTTCCGTTTCTGCATAACTCTATATACTTCCTAGTATTTACTTATCTTATGGATTCTAGATTATGT TTATGTCCATTCACATGCAATGGTTAATAAAGTGCTCCACCATGCAGGCTAGAGCTACTCACATTTGCCTTGATTGTGGATTCATATACACCTTACAGAA ACCTTTTGATGAGCAGGTAAGGGCACCATATGTAAATGTTTGTTTGTCCCCTTGTCCTGTTTTCCTCCGGGTGCAAACGGTTTTTTAAAAGAAGGGATAC TTTTATTTTAAATTCATTATGATATTGTATCCACATTTTTGCCTTGAATCCTGCAGTATTCAAAGCATCATTTGCTTGATTAGACTTGTATCATTTTGTT TTATTTACTATCTTCTGTGCCTCACAACTTGCCAATATACTGAGTGATTTATTGCTAGCTAAAAAGATGCATGTTTCAATTTCATATCTTGTGCCAGTAG ACTTACTTCCTGATAGATGATCTTATCGAAGTTGGATTTTTCAACACAGACTATTTCGGAAAATGTTTTTGTGATTTCCTTTTATGTTATGGTTTGTAGC CGGACACGTATGGATGCCCCCAATGTCAAGCACCTAAGAAGAGATTTGCTCAATATGATGTTAACACCGGAAAAGCTATTGGTGGTGGTTTGCCTCCTAT TGGAGTTATTATTGGACTTCTGGCTGGTTTAGGTGCAATAGGAGCATTGCTTACTTATGGTCTTCAGTGACAATTTTATTTTATATTTTTCTGTCCTCCA AGCCTGTCTCAATCTCTGAGATTTGTATCTAAGAAATTCCTTCCATGTTCATGTCAAAGTAGAAGGTTAATGTATGAGAGCAAATATACACTGCAATAAC AATAACAATCAAACTACTATCTTTGTGTTCTTTATTTTCTTTTTCGGACAGCTACATTTGATGAGAAAATAGCATTATCATTACTTTTAGTACCATGTAA GAAATGGTGTCACCTCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_192136; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_487313
| Blastp | Protein MET1, chloroplastic from Arabidopsis with 40.3% of identity |
|---|---|
| Blastx | - |
| Eggnog | NA(ENOG410ZEH3) |
| Kegg | Link to kegg annotations (AT1G55480) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444605.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |