Ll_transcript_487349

• Id Trinity: TRINITY_DN52368_c0_g1_i3
• Name Transcript: Ll_transcript_487349
• Sequence: TTTTTGGTGAATATCTCTAAGACACGGAGGTGGTTGTAGGAGCAAATCGGTTTAAAATATTATATTTATTGTTGAAAAAAATGAGATGCAAACCTATTTA TATTCCTTTCTTTATTCGTCATTTTCATTTCGCATCTTATCTACTCTCTTCTCCACTCTCCAAACCCTAGATTTTCCATGCTCTCATTCTCTTCTCTCTT TTCCTTCCGATAATGGCTTCTTCCACCACCACCACTCAGGTCTATATTAACGTTATCGAGGATGTCATGGTTAAGGTTCGCGACGAATTCGTTAACAACG CTGGTCCTGGCTATCAAGTTCTCAAGGATCTTCAAGCTATGTGGGAATCAAAGATGATGCAAGTTGGTGTGATCGTGGGTCCCATAGAGAGGTCCACTGT GCCTCGGCCAACGCCCGGTGGTCCAATTACTCCGGTTCATGATCTTAACATGCCTTATGAGGGGACTGAGGAGTATGAAACTCCGACAGCTGAAATACTT TTTCCCCCTACACCGTTGCAAACTCCAATTCAAACTCCTTTACCTGGAACTGGGGATAACTCTATGTATAACATTCCTACTGGACCCAGTGACTACTCCT CTTCTGGAAATGTTACAGGAGGAAATACGGATCCAAAAGGGGGAAGACCTAGTCCATACATGCAACCTCCTTCTCCCTGGATGAACCATCGACCTCCACT TGATGTCAATGTTGCTTATGTGGAAGGGCGAGATGAGGTGGACAGAGGAACTTCTAATCAACATCTGACACAGGACTTCTTCGCAATGCCCCCAGGAAAG CGAAAACGTGATGATTTGGCTTCACAGTATAATGCTGGTGGATATATACCTCAGCAAGATGGATCTGGAGATATTGCATCTGGAGTTTTTGAAATTGAGG TTAATGGAGGGAGTATTTCCATTAGTGCACAGCACACTACTTTGAAAGGAAATATGTCAGCAGATTTGGAGAGACCACTTTCTAGGATTCCTCAACTTGA TGGACCAATTCCTTACGAGGATGATGCCCTTTCTACTCCAAACATATACAATTATGGAGGAGTATTCAGTGAAGACTACAATGTTGCAAATACACCAGCT CCTCCCGAAATACCAGCAAGCACCCCTGCTCTAGTAGCTGAAAATGAAGCGGAAAATGATGATGATGCTGATGATGATGAGCCTCCATTAAATGAAAATG ATGATGATGATTTGGATGATTTGGAGCAAGGAGATGATCAAAATACACATCATCTTGTTTTGGCTCAGTTTGACAAGGTGTCACGTACCAAGAGCAGGTG GAAGTGCACATTAAAGGACGGCATCATGCACATCAATAATAAGGACATTCTCTTCAATAAGGCAACAGGAGAATTCGACTTCTGATTTTGTTGGGATCTG GCCTACTGTTTAGTGGCATTGCTGTGATACAACATAACTCAGAGGACTCATTGGAAGCTTGAGGAAGAAAAAAGTCCTTGATACTTTGGAGACTGTTATG ATGATATTGGCCTATTGTACATAAATGATGAGCAAATTTTGGCCTTTACAATGATGTATAGTGAGGGATTTCCTAAAGTTTGCCATTTGTCAAGTAGGCT ATGTAGTTAACTATGTTAGCTGTGTATTTGGACATTTTGGTTAATTTAAGAGTTGCATTGTATGATAATTATAGAAAGGGTTTGCATTGCAGAATGAGAT ACATGCCCAAAATGCAAATGCCAAAGGTTAGCTTTGGTATTGCTTGTGGAATCTTGAAAAATAAATTTGTTACTTGGTTTGGTTTTAGCAATATCTGTTA TAAACAAGCCTTGAAGCATCATAGTTGAATCAAACATCTTCC
• Tissue: pods
• Gene name: LI_gene_192161;
• Additional information: details;

Expression of Ll_transcript_487349

FPKM

• PAB: 16.3
• PNAB: 13.6
• PS1: 13.9
• PS2: 7.9
• PS3: 11.7
• PW1: 12.4
• PW2: 11.1
• PW3: 10.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_487349

• Blastp: Transcription initiation factor IIA large subunit from Schizosaccharomyces with 24.75% of identity
• Blastx: Transcription initiation factor IIA subunit 1 from Dictyostelium with 62.79% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPBC28F2.09)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448333.1)
• Pfam: Transcription factor IIA, alpha/beta subunit (PF03153.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;