| Id Trinity | TRINITY_DN52368_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_487350 |
| Sequence | AAGTTCTCAAGGATCTTCAAGCTGTAACAATTTATTTTCAATTCATTCCATTATTTGTTTATATAACTCTGATTTATATGTTCATTGAAATTTGAATTGT GCTTTGGTTTATCTTGGAGGAATTTTATTTCTGTGTTGATTTAGGGCTTTGATCTGTTCAATTATTCGGTTCCTGATTGTTTTATGTGATTTTGTTATTA TTATAGAGGGAATTACGCCGTCGAGATTTGGATTTATTACACTAGTGTCCATATTGTTTCAGAAATTATATCAACCTCCTATTAGGTTTATGTTATCATA CTCTTGATCTGTGTAGCTTTTGAAATAAGAGAAGTGGTAGTGTGTAAGTAAGCAAAATCTCAAGGCGGATTAGTGTAATTTGTTTGTTATATTATGTAGT GAGGTTGTTTATGATGTTTTCCATTTTTTTGTTGGCAATTTATTTAGATGTGGGAATCAAAGATGATGCAAGTTGGTGTGATCGTGGGTCCCATAGAGAG GTCCACTGTGCCTCGGCCAACGCCCGGTGGTCCAATTACTCCGGTTCATGATCTTAACATGCCTTATGAGGGGACTGAGGAGTATGAAACTCCGACAGCT GAAATACTTTTTCCCCCTACACCGTTGCAAACTCCAATTCAAACTCCTTTACCTGGAACTGGGGATAACTCTATGTATAACATTCCTACTGGACCCAGTG ACTACTCCTCTTCTGGAAATGTTACAGGAGGAAATACGGATCCAAAAGGGGGAAGACCTAGTCCATACATGCAACCTCCTTCTCCCTGGATGAACCATCG ACCTCCACTTGATGTCAATGTTGCTTATGTGGAAGGGCGAGATGAGGTGGACAGAGGAACTTCTAATCAACATCTGACACAGGACTTCTTCGCAATGCCC CCAGGAAAGCGAAAACGTGATGATTTGGCTTCACAGTATAATGCTGGTGGATATATACCTCAGCAAGATGGATCTGGAGATATTGCATCTGGAGTTTTTG AAATTGAGGTTAATGGAGGGAGTATTTCCATTAGTGCACAGCACACTACTTTGAAAGGAAATATGTCAGCAGATTTGGAGAGACCACTTTCTAGGATTCC TCAACTTGATGGACCAATTCCTTACGAGGATGATGCCCTTTCTACTCCAAACATATACAATTATGGAGGAGTATTCAGTGAAGACTACAATGTTGCAAAT ACACCAGCTCCTCCCGAAATACCAGCAAGCACCCCTGCTCTAGTAGCTGAAAATGAAGCGGAAAATGATGATGATGCTGATGATGATGAGCCTCCATTAA ATGAAAATGATGATGATGATTTGGATGATTTGGAGCAAGGAGATGATCAAAATACACATCATCTTGTTTTGGCTCAGTTTGACAAGGTGTCACGTACCAA GAGCAGGTGGAAGTGCACATTAAAGGACGGCATCATGCACATCAATAATAAGGACATTCTCTTCAATAAGGCAACAGGAGAATTCGACTTCTGATTTTGT TGGGATCTGGCCTACTGTTTAGTGGCATTGCTGTGATACAACATAACTCAGAGGACTCATTGGAAGCTTGAGGAAGAAAAAAGTCCTTGATACTTTGGAG ACTGTTATGATGATATTGGCCTATTGTACATAAATGATGAGCAAATTTTGGCCTTTACAATGATGTATAGTGAGGGATTTCCTAAAGTTTGCCATTTGTC AAGTAGGCTATGTAGTTAACTATGTTAGCTGTGTATTTGGACATTTTGGTTAATTTAAGAGTTGCATTGTATGATAATTATAGAAAGGGTTTGCATTGCA GAATGAGATACATGCCCAAAATGCAAATGCCAAAGGTTAGCTTTGGTATTGCTTGTGGAATCTTGAAAAATAAATTTGTTACTTGGTTTGGTTTTAGCAA TATCTGTTATAAACAAGCCTTGAAGCATCATAGTTGAATCAAACATCTTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_192161; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_487350
| Blastp | Transcription initiation factor IIA subunit 1 from Dictyostelium with 64.29% of identity |
|---|---|
| Blastx | Transcription initiation factor IIA subunit 1 from Dictyostelium with 62.79% of identity |
| Eggnog | transcription factor IIA(ENOG4111M8K) |
| Kegg | Link to kegg annotations (DDB_G0290327) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448333.1) |
| Pfam | Transcription factor IIA, alpha/beta subunit (PF03153.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |