Id Trinity | TRINITY_DN52371_c0_g1_i14 |
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Name Transcript | Ll_transcript_487743 |
Sequence | CTCTAATTCGTTACTCTCTCTCTATCGTTCAATATTTTGATTTCGCCTTCCAAATTCGAAACCGAATGCACAGTTTATATGCTGTGGTGTCTAAATCCAA CTTCGATCGCATTCACTTTTTTTTATAGATTTATTAGCTATTTCGTACTCTTTCAAATTTCATTGCTATGTGGTTAGGATTAGCAAAATTAATTTCGTTT CCATTCGTATCAGGACGTTTGAATCGTGCAATTAGAAATTAGCTGAGGCGAGGTTTGCTCTGAGACAGTTTACATCAATTGATGTTAAATTTAGATACGG TTGTAAATAAAATTAGCTTAAATTGGAATCTTAAGATCTGTTCTGAAAGTTTTCGTATTAGGTTTTGAAAAAAGTGATTTTCCGTAGATATTTTTTGGCA GAAACTTGTTTGTGAGTGAGAAGCTGAATTTCTGAGTTCTTTCATATAATTTATTAAAAAACTTATGAATGTTTCCCACAGGTTAGTTTAATTTTCTAAT TACTAATTAATATTTTTATTTTACAGTTTCTGTTCTATGGCATATAAGCTTCTGTCCTTATAGAAAGTTAGTCCTCAGACACACAAGTGTTGGTATCATG AAACTTGAAATTATTTGCTATTGTCATGCTACCAATTAAATTGTTCTTTCTTGGCAAGATTTCACATCAACAAATATTGGTAATGTGAAAGTAGATGGAG TGTATGAGTGTATCTTATATGATAAAATTTTGGCTTGTGATGAACTCATATGTTAAAATATGACCGGTTTTCCTTTGCCATACTTCTGTGCATGCTTGAA GCATCCATGTATTGCATCTATGAGATTCTTCAGCACTTTTGAATGTTGAATTGCTTTGGTACATTCGTTGAGATTCACAATTCAGTTGGAGTCGGGTCTA ATTAGATTAAGATATTATGCACAACCCATCTTAAGTTGTATCCTGATTCCTGAATATGTTGATGGTATTTATACATGTTAAGAGTGGAATGATATTTAGT GTGCTGATGCTCGGTTTATTTTTGAGAATTGGAGAAAATGAAAATCTATTTTGATGTTGGGTTCAATCTATTTATCTTGTCATCTTTTGTTTGGTGATGT CATTCCCTGATTCTATATATCATGATCACAAATTTTATGTACAAACCTGAGATTTTCTCTTCTTTTTGCTTGCAGAAATATGTCTGTTTGAGTTTTTCAA CATTGTTCTCTTTGAGCATTGCAATGAAGGTGTAGAGGATATCTATAGGTAATCAGGCGCTCCAAATTCAACAATGAAGCGATATGTTTACATCAACGAT GATGAATCATTACATGATTTACACTGTGATAACCGTATTTCAAACAGAAAATATACTGTATTGAACTTTCTTCCAAAAAATTTATGGGAACAGTTCAGCC GGTTCATGAACCAGTACTTTTTGCTGATAGCCTGCCTGCAGCTATGGCCTCTCATTACTCCAGTAAATCCTGCCAGTACTTGGGGTCCACTTATCTTTAT TTTTGCAGTCTCTGCATCAAAAGAGGCGTGGGATGATTACAATAGATATCTTTCAGACAAGAAGGCAAATGAGAAGGACGTCTGGGTTGTGAGGAAGGGC GTCAAGCAACATGTCGAAGCCCAAGATATTCTTGTGGGTAATTTAGTATGGCTTCGTGAAAATGATGAAGTGCCTTGTGACCTTGTTTTGATTGGTACAT CTGATTCTCAAGGAGTGTGCTATATAGAGACTTCTGCAATGGATGGTGAAACGGATTTGAAGACACGGGTCATCCCTTCTGCTTGCATGGGAATCAATGT TGAACTTTTGCACAAAATTAAGGGTGTAATCGAGTGTCCCAGTCCAGATAAAGACATTAGAAGATTTGATGCAAACATGCGGTTGTTCCCCCCATTTATT GATAATGACATATGCCCTTTAACCATTAAAAACACAGTTCTTCAGTCTTGTTACCTGCGGAACACTGAATGGGCATGCGGAGTGGCTGTCTATACAGGCA ATGAAACCAAGCTTGGCATGAGTAGAGGCATCCCAGAACCAAAGCTCACTGCTATGGATGCCATGATCGACAAGCTGACTGTTGCTATATTTGTATTTCA AATTGTTGTTGTTATGGTTCTTGGCATAGCGGGTAATGTTTGGAAGGGTACAGAAGCGAAGAAACAATGGTATGTTCTTTACCCTGATGAAGGCCCTTGG TATGAACTATTGGTCATTCCTTTGCGGTTCGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTATCTCTGGATTTAGTGAAAAGCTTATATG CAAATTTTATTGATTGGGACCATCAGATGATAGACCTAGAGACTAGTATTCCATCTCATGCAACAAATACAGCGATAAGCGAGGACCTAGGGCAAGTTGA GTACATCTTGACTGACAAAACAGGCACCCTGACCGATAACAAAATGATATTTAGAAGATGCTGTATTAATGGCATTTTCTATGGGAATGAGAATGGAGAT GCATTGAAAGATGTAGAGCTTCTCAATGCTGTTTGCAGTGGTTCTCCTGACGTTGTACGATTTCTTACGGTTATGGCAATATGTAATACTGTCATACCTA CTCGAAGCAAAACTGGAGATATCTTGTATAAGGCACAGTCTCAGGATGAGGATGCTCTTGTTCAAGCTGCTGCTTTGATGCATATGGTTTTCCTCAATAA GAATGGAAATATTCTTGAAGTCAAGTTCAACTCCAAAATACTTCAGTATGAAGTCCTGGAAACCTTAGAGTTTACATCTGATAGGAAAAGAATGTCAGTG GTGTTGAAAGATTACCAAAATGGAAAGGTCCTTCTCCTGTCTAAAGGAGCAGATGAGGCTATTCTTCCATATGCTCGTGCCGGGCAGCAAACCCGGAACT TCATTGAAGCTGTGGATCAGTATTCTCACTTGGGGCTACGTACGCTATGTCTGGCTTGCCGTGAGTTAAAGGAGGATGAATATCAGGAATGGTCTTTGAT GTTTAAAGAGGCTAGTAGCACGTTGGTTGATAGAGAGTGGAGAGTAGCTGAGGTCTGCCAAAGAGTAGAACATAACTTGGAAGTCCTTGGTGTAACAGCA ACAGAGGATCGTTTACAGGATGGTG BLAST |
Tissue | pods |
Gene name | LI_gene_192178; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_487743
Blastp | Phospholipid-transporting ATPase 2 from Arabidopsis with 82.82% of identity |
---|---|
Blastx | Phospholipid-transporting ATPase 2 from Arabidopsis with 82.82% of identity |
Eggnog | Phospholipid-transporting atpase(ENOG410XPYK) |
Kegg | Link to kegg annotations (AT5G44240) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432177.1) |
Pfam | Phospholipid-translocating ATPase N-terminal (PF16209.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |