| Id Trinity | TRINITY_DN52371_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_487736 |
| Sequence | CTCTAATTCGTTACTCTCTCTCTATCGTTCAATATTTTGATTTCGCCTTCCAAATTCGAAACCGAATGCACAGTTTATATGCTGTGGTGTCTAAATCCAA CTTCGATCGCATTCACTTTTTTTTATAGATTTATTAGCTATTTCGTACTCTTTCAAATTTCATTGCTATGTGGTTAGGATTAGCAAAATTAATTTCGTTT CCATTCGTATCAGGACGTTTGAATCGTGCAATTAGAAATTAGCTGAGGCGAGGTTTGCTCTGAGACAGTTTACATCAATTGATGTTAAATTTAGATACGG TTGTAAATAAAATTAGCTTAAATTGGAATCTTAAGATCTGTTCTGAAAGTTTTCGTATTAGGTTTTGAAAAAAGTGATTTTCCGTAGATATTTTTTGGCA GAAACTTGTTTGTGAGTGAGAAGCTGAATTTCTGAGTTCTTTCATATAATTTATTAAAAAACTTATGAATGTTTCCCACAGGTTAGTTTAATTTTCTAAT TACTAATTAATATTTTTATTTTACAGTTTCTGTTCTATGGCATATAAGCTTCTGTCCTTATAGAAAGTTAGTCCTCAGACACACAAGTGTTGGTATCATG AAACTTGAAATTATTTGCTATTGTCATGCTACCAATTAAATTGTTCTTTCTTGGCAAGATTTCACATCAACAAATATTGGTAATGTGAAAGTAGATGGAG TGTATGAGTGTATCTTATATGATAAAATTTTGGCTTGTGATGAACTCATATGTTAAAATATGACCGGTTTTCCTTTGCCATACTTCTGTGCATGCTTGAA GCATCCATGTATTGCATCTATGAGATTCTTCAGCACTTTTGAATGTTGAATTGCTTTGGTACATTCGTTGAGATTCACAATTCAGTTGGAGTCGGGTCTA ATTAGATTAAGATATTATGCACAACCCATCTTAAGTTGTATCCTGATTCCTGAATATGTTGATGGTATTTATACATGTTAAGAGTGGAATGATATTTAGT GTGCTGATGCTCGGTTTATTTTTGAGAATTGGAGAAAATGAAAATCTATTTTGATGTTGGGTTCAATCTATTTATCTTGTCATCTTTTGTTTGGTGATGT CATTCCCTGATTCTATATATCATGATCACAAATTTTATGTACAAACCTGAGATTTTCTCTTCTTTTTGCTTGCAGAAATATGTCTGTTTGAGTTTTTCAA CATTGTTCTCTTTGAGCATTGCAATGAAGGTGTAGAGGATATCTATAGGTAATCAGGCGCTCCAAATTCAACAATGAAGCGATATGTTTACATCAACGAT GATGAATCATTACATGATTTACACTGTGATAACCGTATTTCAAACAGAAAATATACTGTATTGAACTTTCTTCCAAAAAATTTATGGGAACAGTTCAGCC GGTTCATGAACCAGTACTTTTTGCTGATAGCCTGCCTGCAGCTATGGCCTCTCATTACTCCAGTAAATCCTGCCAGTACTTGGGGTCCACTTATCTTTAT TTTTGCAGTCTCTGCATCAAAAGAGGCGTGGGATGATTACAATAGATATCTTTCAGACAAGAAGGCAAATGAGAAACAAGTCTGGGTTGTGAGGAAGGGC GTCAAACAACATGTCCAAGCCCAAGATATTCATGTGGGTAATATAGTATGGCTTCGGGAAAATGACGAAGTGCCTTGTGACCTTGTTTTGATTGGTACCT CTGATCCGCAGGGAGTTTGCTATATAGAGACTTCTGCAATGGATGGTGAAACTGATTTGAAGACACGGGTCATACCTTCTGCTTGCATGGGAATCGTTGT TGAACTATTGCACAAAATTAAGGGTGTAATTGAGTGTCCCAGTCCAGACAAAGACATCAGAAGATTTGATGCAAACATGCGGTTGTTCCCCCCTTTTATT GATAATGATATATGCCCTTTAACCATTAAAAACACAATTCTTCAGTCTTGTTACTTACGGAACACTGAATGGGCATGTGGAGTGGCTGTGTATACAGGCA ATGAAACCAAACTTGGCATGAGTAGAGGTATCCCAGAGCCAAAGCTCACTGCTATGGATGCTATGATTGATAAGTTGACGGGTGCTATATTTGTATTCCA AATTGTTGTTGTTATGGTTCTTGGCGTAGCAGGCAATGTTTGGAAGGATACAGAAGCGAAGAAACAATGGTATGTTCTTTACCCTGATGAAGGCCCTTGG TATGAACTATTGGTCATTCCTTTGCGGTTCGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTATCTCTGGATTTAGTGAAGAGCTTATATG CAAACTTTATTGATTGGGACCATCAGATGATAGACCTAGAGACTAGTATTCCATCTCATGCAACAAATACAGCGATAAGCGAGGACCTTGGGCAAGTTGA GTATATCTTGACTGACAAAACAGGCACCCTGACTGAGAATAAAATGATATTTAGAAGATGCTGTATTAATGGCATTTTCTATGGGAATGAGAATGGAGAT GCATTGAAAGATGTAGAGCTCCTCAATGCTGTTTCCAGTGGTTTGCCGGACGTTGTACGATTTCTTACAGTTATGGCAATATGTAATACTGTCATACCTA CACGAAGGTGATTCTGCCTTTATCCTTGCTTGGAAGCAGATATGGAAACTGTTAAGAATGACATATTTCTCAGGATATTTTATTAAGACTTGAGAGTAAA AACTATCAATTGCGCTTTTATTTTCTTGTACACTCATTCACAGCACAACTGGAGATATCTTGTATAAGGCACAGTCTCAGGATGAGGATGCTCTTGTTCA TGCTGCTGCTTGGCTGCATATGGTTTTCTTCAATAAGAATGGAAACATTCTTGAAGTCAAGTTCAACTCCAAGATACTTCAGTATGAAGTTTTGGAAATC TTAGAGTTCACATCTGATAGGAAAAGAATGTCAGTGGTGTTGAAAGATTGCCAAAATGGGAAGATCCTTCTCCTGTCGAAAGGAGCAGATGAGGCTATTC TTCCATATGCTCGTGCCGGGAAGCAAACCCGAAACATCATTGAAGCTGTGGAGCAGTATGCTCACTTGGGACTACGTACACTGTGTCTGGCTTGGCGTGA GTTGAACGAGGATGAATATCAAGAATGGTCTTTGATGTTTAAAGAGGCTAGTAGCACGTTGGTTGATAGAGAGTGGAGAGTAGCTGAGGTCTGTCAAAAA GTAGAGCATAACTTGGAAGTTCTTGGTGTAACAGCAATAGAGGATCGTTTACAGGATGGTGTACCTGAAACAATAGAAACACTAAGAAAAGCTGGAATAA ATTTTTGGATGCTAACAGGAGACAAGCAGAATACTGCAATACAAATTGCCTTGTCATGTAATTTTATTTCTCCAGAACCGAAGGGACAGCTTCTATCAAT TGATGGCAAGACAGAGGATGAAGTTCGTAGGAGTTTAGAGAGAGTGCTCCTTACAATGCGGATAACTACATCAGAACCTAAGAATGTGGCTTTTGTTGTT GATGGCTGGGCTCTTGAGATTGCACTTAACCACTACCGTAAAGCTTTTACCGAGCTGGCAATATTGTCAAGGACTGCTATATGTTGTCGAGTGACACCAT CACAAAAAGCACAGCTTGTACAGATCTTGAAATCATGTGATTATAGAACATTGGCAATTGGTGATGGTGGAAATGATGTAAGGATGATACAGCAAGCTGA TATTGGTGTGGGCATTAGTGGCAGAGAAGGATTGCAGGCAGCAAGAGCAGCTGATTACAGTATCGGAAAGTTTAGATTTCTGAAAAGATTAATTCTGGTT CATGGGCGGTACTCCTACAACCGTACAGCATTTCTTTCTCAGTATTCATTCTACAAGTCCCTACTAATATGTTTCATCCAAATATTGTGAGTATCTACCA TCAATGGCCTTCCTTTTTTCTTTTCCCCATATAAGAAGCAAATTATTTTGAAAATGGGTTCCCCTGCATGTCCTTTTTCTCTTTTTTCTTTTCCTCGCAA GAAAAAGTAGCTAGCTGTATAAAATGGTGTACACAAAAGCACCCAGAGGTAGCTTAGGAAAAAGATTAAAAGTTAAGACAGCATATTTTTCTCCTTTCTG TTTATCCTTTCATGGTTGCTCTTAAAGATCACGAATGTTGCACTGCAAGAAGTGCATTCCAATATATTTCTATTCTCAAATTTTGAGGTACTGATTAGTG GATTTTCAGTTTTTCATTTATTTCAGGTGTCTCTGGAACCAGCCTCTTCAATTCTGTTAGTTTGATGGCTTATAATGTTTTCTACACCAGTATTCCTGTT CTAGTCAGCGTGCTTGACAAAGATCTTAGTGAGGAAACTGTGATGCAGCATCCTCAGATTCTATTTTATTGTCAAGCGGGGAGGTTTGACATTATGCTTC TATTTACCTTGCTGTTTTAAATGCTACCATATCATCTTATTTTTGCATAACTTTTAGTGCACTTCAAGTGAACAATTTTTTCCATCATGGTTTGATTGCT ACTTCTTGTAACAAAACAATCAAATTTATTTAACTGAATAACCTTTTCTAAACAGTGGAAAAATTGTTTAGCTTGCACCCAGCGTCCACTTCATTGGTAA TCATTAAATTGACTTTATAAGTATTGGAACAGGCTTCTAAATCCTAGTACTTTTGCTGGATGGTTTGGGCGATCTCTCTTCCATGTAAGTGTTGTTTCTG AGCTTATTTTTGGTGCTTATATTGAGAACTATTTATTTATTAATTACTGAGATGATGAGTTAATAGGAAGCTTATCATCATGACTCAAGTACGGATGATG TCATTGAAAGAAAAAAATCATATTCCTTTTTCTCTAAAATAATCAAGTAATAGTTTCAGGTACTTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_192178; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_487736
| Blastp | Phospholipid-transporting ATPase 2 from Arabidopsis with 87.08% of identity |
|---|---|
| Blastx | Phospholipid-transporting ATPase 2 from Arabidopsis with 86.04% of identity |
| Eggnog | Phospholipid-transporting atpase(ENOG410XPYK) |
| Kegg | Link to kegg annotations (AT5G44240) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432177.1) |
| Pfam | Cation transport ATPase (P-type) (PF13246.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |